RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C YMR130WQ04223 302 aa3.21□□□□□ -1.9
CUP9YPL177C MMR1Q06324 491 aa3.21□□□□□ -1.9
CUP9YPL177C YOR387CQ08910 206 aa3.21□□□□□ -1.9
CUP9YPL177C ISA2Q12425 185 aa3.21□□□□□ -1.9
CUP9YPL177C RAD61Q99359 647 aa3.21□□□□□ -1.9
CUP9YPL177C CPR4P25334 318 aa3.2□□□□□ -1.9
CUP9YPL177C APE3P37302 537 aaKnown RBP3.2□□□□□ -1.9
CUP9YPL177C YBR137WP38276 179 aa3.2□□□□□ -1.9
CUP9YPL177C RRP4P38792 359 aaKnown RBP3.2□□□□□ -1.9
CUP9YPL177C CAK1P43568 368 aaPredicted RBP3.2□□□□□ -1.9
CUP9YPL177C WWM1P43582 211 aaKnown RBP3.2□□□□□ -1.9
CUP9YPL177C YPI1P43587 155 aa3.2□□□□□ -1.9
CUP9YPL177C NCA3P46955 337 aa3.2□□□□□ -1.9
CUP9YPL177C SHE10P53075 577 aa3.2□□□□□ -1.9
CUP9YPL177C YNR048WP53740 393 aa3.2□□□□□ -1.9
CUP9YPL177C IBD2P53892 351 aa3.2□□□□□ -1.9
CUP9YPL177C OCA2P53949 197 aa3.2□□□□□ -1.9
CUP9YPL177C PBA1Q05778 276 aa3.2□□□□□ -1.9
CUP9YPL177C DCS1Q06151 350 aa3.2□□□□□ -1.9
CUP9YPL177C REX4Q08237 289 aa3.2□□□□□ -1.9
CUP9YPL177C ESA1Q08649 445 aa3.2□□□□□ -1.9
CUP9YPL177C VPS54Q12071 889 aa3.2□□□□□ -1.9
CUP9YPL177C RRP12Q12754 1228 aaKnown RBP3.2□□□□□ -1.9
CUP9YPL177C TEF1P02994 458 aaKnown RBP3.19□□□□□ -1.9
CUP9YPL177C SCEIP03882 235 aa3.19□□□□□ -1.9
CUP9YPL177C ARG4P04076 463 aaPredicted RBP3.19□□□□□ -1.9
CUP9YPL177C CLN1P20437 546 aa3.19□□□□□ -1.9
CUP9YPL177C CTR86P25355 563 aa3.19□□□□□ -1.9
CUP9YPL177C NAM9P27929 486 aa3.19□□□□□ -1.9
CUP9YPL177C SMY1P32364 656 aaKnown RBP3.19□□□□□ -1.9
CUP9YPL177C SLM4P38247 162 aa3.19□□□□□ -1.9
CUP9YPL177C NDT80P38830 627 aa3.19□□□□□ -1.9
CUP9YPL177C SER3P40054 469 aa3.19□□□□□ -1.9
CUP9YPL177C SPG5P42933 373 aa3.19□□□□□ -1.9
CUP9YPL177C PHO86P46956 311 aa3.19□□□□□ -1.9
CUP9YPL177C SSN8P47821 323 aa3.19□□□□□ -1.9
CUP9YPL177C ELP3Q02908 557 aaKnown RBP3.19□□□□□ -1.9
CUP9YPL177C GIP3Q03016 1276 aa3.19□□□□□ -1.9
CUP9YPL177C BET5Q03630 159 aa3.19□□□□□ -1.9
CUP9YPL177C YLR108CQ12259 485 aa3.19□□□□□ -1.9
CUP9YPL177C RMD5Q12508 421 aa3.19□□□□□ -1.9
CUP9YPL177C CPR2P23285 205 aa3.18□□□□□ -1.9
CUP9YPL177C LSB5P25369 354 aa3.18□□□□□ -1.9
CUP9YPL177C DEG1P31115 442 aaKnown RBP3.18□□□□□ -1.9
CUP9YPL177C VMA8P32610 256 aaKnown RBP3.18□□□□□ -1.9
CUP9YPL177C YBL059WP34224 193 aa3.18□□□□□ -1.9
CUP9YPL177C RRN10P38204 145 aa3.18□□□□□ -1.9
CUP9YPL177C TOF1P53840 1238 aa3.18□□□□□ -1.9
CUP9YPL177C ADD37Q03233 198 aa3.18□□□□□ -1.9
CUP9YPL177C PPM1Q04081 328 aa3.18□□□□□ -1.9
CUP9YPL177C TSR1Q07381 788 aaKnown RBP3.18□□□□□ -1.9
CUP9YPL177C SNX3Q08826 162 aaKnown RBP3.18□□□□□ -1.9
CUP9YPL177C ERV2Q12284 196 aa3.18□□□□□ -1.9
CUP9YPL177C SMC6Q12749 1114 aa3.18□□□□□ -1.9
CUP9YPL177C COX3P00420 269 aa3.17□□□□□ -1.9
CUP9YPL177C SPT15P13393 240 aaKnown RBP3.17□□□□□ -1.9
CUP9YPL177C ARO3P14843 370 aaKnown RBP3.17□□□□□ -1.9
CUP9YPL177C SPO12P17123 173 aa3.17□□□□□ -1.9
CUP9YPL177C SPS22P25380 463 aa3.17□□□□□ -1.9
CUP9YPL177C SRP72P38688 640 aaKnown RBP3.17□□□□□ -1.9
CUP9YPL177C RPT4P53549 437 aaKnown RBP3.17□□□□□ -1.9
CUP9YPL177C GPI15P53961 229 aa3.17□□□□□ -1.9
CUP9YPL177C HOT1Q03213 719 aa3.17□□□□□ -1.9
CUP9YPL177C RSN1Q03516 953 aa3.17□□□□□ -1.9
CUP9YPL177C HEL2Q05580 639 aaKnown RBP3.17□□□□□ -1.9
CUP9YPL177C MRPL35Q06678 367 aa3.17□□□□□ -1.9
CUP9YPL177C SGT1Q08446 395 aa3.17□□□□□ -1.9
CUP9YPL177C SKI7Q08491 747 aaPredicted RBP3.17□□□□□ -1.9
CUP9YPL177C HHF1P02309 103 aaKnown RBP3.16□□□□□ -1.9
CUP9YPL177C SPO7P18410 259 aa3.16□□□□□ -1.9
CUP9YPL177C SWH1P35845 1188 aa3.16□□□□□ -1.9
CUP9YPL177C KKQ8P36004 724 aa3.16□□□□□ -1.9
CUP9YPL177C MRPL4P36517 319 aa3.16□□□□□ -1.9
CUP9YPL177C SLX1P38324 304 aa3.16□□□□□ -1.9
CUP9YPL177C MTC6P38849 526 aa3.16□□□□□ -1.9
CUP9YPL177C YAL037WP39728 267 aa3.16□□□□□ -1.9
CUP9YPL177C PRM5P40476 318 aa3.16□□□□□ -1.9
CUP9YPL177C AZR1P50080 613 aa3.16□□□□□ -1.9
CUP9YPL177C YMR181CQ03231 154 aa3.16□□□□□ -1.9
CUP9YPL177C TAF12Q03761 539 aa3.16□□□□□ -1.9
CUP9YPL177C RRN11Q04712 507 aa3.16□□□□□ -1.9
CUP9YPL177C BSC6Q08280 497 aa3.16□□□□□ -1.9
CUP9YPL177C TMS1Q12116 473 aa3.16□□□□□ -1.9
CUP9YPL177C MDH1P17505 334 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
CUP9YPL177C RAD57P25301 460 aa3.15□□□□□ -1.91
CUP9YPL177C HEL1P36113 551 aa3.15□□□□□ -1.91
CUP9YPL177C OAZ1Q02803 292 aa3.15□□□□□ -1.91
CUP9YPL177C SNT309Q06091 175 aaPredicted RBP3.15□□□□□ -1.91
CUP9YPL177C ERP4Q12450 207 aa3.15□□□□□ -1.91
CUP9YPL177C MTR10Q99189 972 aa3.15□□□□□ -1.91
CUP9YPL177C TRP1P00912 224 aa3.14□□□□□ -1.91
CUP9YPL177C ADE4P04046 510 aaKnown RBP3.14□□□□□ -1.91
CUP9YPL177C IMA3P0CW40 589 aa3.14□□□□□ -1.91
CUP9YPL177C IMA4P0CW41 589 aa3.14□□□□□ -1.91
CUP9YPL177C HOM3P10869 527 aa3.14□□□□□ -1.91
CUP9YPL177C SDH3P33421 198 aa3.14□□□□□ -1.91
CUP9YPL177C PAD1P33751 242 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
CUP9YPL177C PTH1P38876 190 aaKnown RBP3.14□□□□□ -1.91
CUP9YPL177C RSC1P53236 928 aa3.14□□□□□ -1.91
CUP9YPL177C IMA2Q08295 589 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms