RNA–Protein interactions for RNA: YOL122C

SMF1, Transcript of Divalent metal ion transporter, yeast

Gene SMF1, Length 1,728 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMF1	YOL122C	KTR5	P53966	522 aa	Predicted RBP	4.22	□□□□□ -1.73
SMF1	YOL122C	KAP120	Q02932	1032 aa		4.22	□□□□□ -1.73
SMF1	YOL122C	SNU56	Q03782	492 aa	Known RBP	4.22	□□□□□ -1.73
SMF1	YOL122C	SEC10	Q06245	871 aa		4.22	□□□□□ -1.73
SMF1	YOL122C	NSE1	Q07913	336 aa		4.22	□□□□□ -1.73
SMF1	YOL122C	IRC10	Q08118	586 aa		4.22	□□□□□ -1.73
SMF1	YOL122C	SIL1	Q08199	421 aa		4.22	□□□□□ -1.73
SMF1	YOL122C	PGC1	Q08959	321 aa		4.22	□□□□□ -1.73
SMF1	YOL122C	SIR4	P11978	1358 aa		4.22	□□□□□ -1.73
SMF1	YOL122C	ALG1	P16661	449 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	DAP2	P18962	818 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	MBR1	P23493	339 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	BUD5	P25300	642 aa	Predicted RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	HSP30	P25619	332 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	MTR2	P34232	184 aa	Known RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	LSM12	P38828	187 aa	Known RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	PCF11	P39081	626 aa	Predicted RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	PAC2	P39937	518 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	YER137C	P40083	148 aa	Known RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	ULP2	P40537	1034 aa	Predicted RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	YJL107C	P42947	387 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	CAK1	P43568	368 aa	Predicted RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	YJL055W	P47044	245 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	MAL13	P53338	473 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	PEX25	Q02969	394 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	MMT1	Q03218	510 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	RPN9	Q04062	393 aa	Known RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	NKP2	Q06162	153 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	VTA1	Q06263	330 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	DXO1	Q06349	442 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	UIP4	Q08926	304 aa		4.21	□□□□□ -1.73
SMF1	YOL122C	SPE3	Q12074	293 aa	Known RBP	4.21	□□□□□ -1.73
SMF1	YOL122C	NCE102	Q12207	173 aa	RIP-Chip data	4.21	□□□□□ -1.73	not detected
SMF1	YOL122C	DBP3	P20447	523 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	DPB2	P24482	689 aa	Predicted RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	KRR1	P25586	316 aa	Predicted RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	IDH2	P28241	369 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	YIM1	P28625	365 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	TIF5	P38431	405 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	RRF1	P38771	230 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	RCY1	P39531	840 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	PCI8	P40512	444 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	NET1	P47035	1189 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	LYS20	P48570	428 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	ORC5	P50874	479 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	DRN1	P53255	507 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	ZPR1	P53303	486 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	SLT2	Q00772	484 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	CWC21	Q03375	135 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	HER2	Q03557	464 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	PDR8	Q06149	701 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	MLH2	Q07980	695 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	RPN8	Q08723	338 aa	Known RBP	4.21	□□□□□ -1.74
SMF1	YOL122C	FRE3	Q08905	711 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	PFA4	Q12006	378 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	VIK1	Q12045	647 aa		4.21	□□□□□ -1.74
SMF1	YOL122C	NTE1	Q04958	1679 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	RPN13	O13563	156 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	PUT2	P07275	575 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	RPL31B	P0C2H9	113 aa	Known RBP	4.2	□□□□□ -1.74
SMF1	YOL122C	GPA2	P10823	449 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	DBF2	P22204	572 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	ADY2	P25613	283 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	MSS51	P32335	436 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	MTW1	P39731	289 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	TAX4	P47030	604 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	MDE1	P47095	244 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	RSF1	Q05043	376 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	PIG1	Q06216	648 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	BSP1	Q06604	576 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	MCH4	Q08268	501 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	SMF3	Q12078	473 aa	Predicted RBP	4.2	□□□□□ -1.74
SMF1	YOL122C	CTF3	Q12748	733 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	SEY1	Q99287	776 aa		4.2	□□□□□ -1.74
SMF1	YOL122C	SNT2	P53127	1403 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	PEP4	P07267	405 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	MSS116	P15424	664 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	POL30	P15873	258 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	KRE2	P27809	442 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	STP2	P38704	541 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	AST2	P39945	430 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	SER3	P40054	469 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	AVT6	P40074	448 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	YTA12	P40341	825 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	YIL060W	P40519	144 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	BNA6	P43619	295 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	TMA22	P47089	198 aa	Predicted RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	BRO1	P48582	844 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	PYK2	P52489	506 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	CUL3	P53202	744 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	RPM2	Q02773	1202 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	ABZ2	Q03266	374 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	SPC24	Q04477	213 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	GLO2	Q05584	274 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	YDL057W	Q07379	328 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	NOP6	Q07623	225 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	SMC5	Q08204	1093 aa		4.19	□□□□□ -1.74
SMF1	YOL122C	CUE5	Q08412	411 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	RPN5	Q12250	445 aa	Known RBP	4.19	□□□□□ -1.74
SMF1	YOL122C	FRE6	Q12473	712 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms