RNA–Protein interactions for RNA: YIL035C

CKA1, Transcript of Alpha catalytic subunit of casein kinase 2 (CK2), yeast

Gene CKA1, Length 1,119 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKA1	YIL035C	HCS1	P34243	683 aa		2.76	□□□□□ -1.97
CKA1	YIL035C	SAS2	P40963	338 aa		2.76	□□□□□ -1.97
CKA1	YIL035C	GAB1	P41733	394 aa		2.76	□□□□□ -1.97
CKA1	YIL035C	VTC2	P43585	828 aa		2.76	□□□□□ -1.97
CKA1	YIL035C	IRC6	P43615	237 aa		2.76	□□□□□ -1.97
CKA1	YIL035C	YIF1	P53845	314 aa	Known RBP	2.76	□□□□□ -1.97
CKA1	YIL035C	JJJ1	P53863	590 aa		2.76	□□□□□ -1.97
CKA1	YIL035C	CUE5	Q08412	411 aa	Known RBP	2.76	□□□□□ -1.97
CKA1	YIL035C	SCM3	Q12334	223 aa		2.76	□□□□□ -1.97
CKA1	YIL035C	ARG4	P04076	463 aa	Predicted RBP	2.75	□□□□□ -1.97
CKA1	YIL035C	GPI10	P30777	616 aa		2.75	□□□□□ -1.97
CKA1	YIL035C	LYS1	P38998	373 aa	RIP-Chip data	2.75	□□□□□ -1.97	not detected
CKA1	YIL035C	UTP18	P40362	594 aa	Predicted RBP	2.75	□□□□□ -1.97
CKA1	YIL035C	RPT6	Q01939	405 aa	Known RBP	2.75	□□□□□ -1.97
CKA1	YIL035C	ORT1	Q12375	292 aa		2.75	□□□□□ -1.97
CKA1	YIL035C	AHC1	Q12433	566 aa		2.75	□□□□□ -1.97
CKA1	YIL035C	RIP1	P08067	215 aa		2.74	□□□□□ -1.97
CKA1	YIL035C	NPL6	P32832	435 aa		2.74	□□□□□ -1.97
CKA1	YIL035C	CSE2	P33308	149 aa		2.74	□□□□□ -1.97
CKA1	YIL035C	MID2	P36027	376 aa		2.74	□□□□□ -1.97
CKA1	YIL035C	YJR085C	P47131	105 aa	Known RBP	2.74	□□□□□ -1.97
CKA1	YIL035C	RNY1	Q02933	434 aa	Known RBP	2.74	□□□□□ -1.97
CKA1	YIL035C	TAF11	Q04226	346 aa		2.74	□□□□□ -1.97
CKA1	YIL035C	RQC1	Q05468	723 aa	Known RBP	2.74	□□□□□ -1.97
CKA1	YIL035C	SGT1	Q08446	395 aa		2.74	□□□□□ -1.97
CKA1	YIL035C	SNU66	Q12420	587 aa	Predicted RBP	2.74	□□□□□ -1.97
CKA1	YIL035C	RMD5	Q12508	421 aa		2.74	□□□□□ -1.97
CKA1	YIL035C	ARG3	P05150	338 aa		2.73	□□□□□ -1.97
CKA1	YIL035C	ILV5	P06168	395 aa	Known RBP	2.73	□□□□□ -1.97
CKA1	YIL035C	PPH22	P23595	377 aa		2.73	□□□□□ -1.97
CKA1	YIL035C	SNT1	P25357	1226 aa		2.73	□□□□□ -1.97
CKA1	YIL035C	YHR054C	P38780	354 aa		2.73	□□□□□ -1.97
CKA1	YIL035C	AIM10	P39965	576 aa	Known RBP	2.73	□□□□□ -1.97
CKA1	YIL035C	MRPL19	P53875	158 aa		2.73	□□□□□ -1.97
CKA1	YIL035C	RIM20	Q12033	661 aa		2.73	□□□□□ -1.97
CKA1	YIL035C	YRM1	Q12340	786 aa		2.73	□□□□□ -1.97
CKA1	YIL035C	GPH1	P06738	902 aa	Known RBP	2.72	□□□□□ -1.97
CKA1	YIL035C	RAD57	P25301	460 aa		2.72	□□□□□ -1.97
CKA1	YIL035C	HXT3	P32466	567 aa	Known RBP	2.72	□□□□□ -1.97
CKA1	YIL035C	BLI1	P35727	113 aa		2.72	□□□□□ -1.97
CKA1	YIL035C	VHC1	P38329	1120 aa		2.72	□□□□□ -1.97
CKA1	YIL035C	RFC3	P38629	340 aa		2.72	□□□□□ -1.97
CKA1	YIL035C	UTP9	P38882	575 aa	Known RBP	2.72	□□□□□ -1.97
CKA1	YIL035C	HMS2	P47175	358 aa		2.72	□□□□□ -1.97
CKA1	YIL035C	AZR1	P50080	613 aa		2.72	□□□□□ -1.97
CKA1	YIL035C	YLR287C	Q05881	355 aa		2.72	□□□□□ -1.97
CKA1	YIL035C	JLP2	P40206	208 aa		2.71	□□□□□ -1.98
CKA1	YIL035C	PLP2	Q12017	286 aa		2.71	□□□□□ -1.98
CKA1	YIL035C	PGA3	Q12746	312 aa	Known RBP	2.71	□□□□□ -1.98
CKA1	YIL035C	FAB1	P34756	2278 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	RED1	P14291	827 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	FUR1	P18562	216 aa	Known RBP	2.7	□□□□□ -1.98
CKA1	YIL035C	CTR86	P25355	563 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	YJR011C	P47086	261 aa	Predicted RBP	2.7	□□□□□ -1.98
CKA1	YIL035C	RSC1	P53236	928 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	BET5	Q03630	159 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	MDM30	Q05930	598 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	GRX6	Q12438	231 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	IZH2	Q12442	317 aa		2.7	□□□□□ -1.98
CKA1	YIL035C	HSP82	P02829	709 aa	Known RBP	2.69	□□□□□ -1.98
CKA1	YIL035C	CKA1	P15790	372 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	SIN4	P32259	974 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	ERG3	P32353	365 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	VMA8	P32610	256 aa	Known RBP	2.69	□□□□□ -1.98
CKA1	YIL035C	SMF1	P38925	575 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	MIG3	P39943	394 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	ARF3	P40994	183 aa	RIP-Chip data	2.69	□□□□□ -1.98	not detected
CKA1	YIL035C	MDE1	P47095	244 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	RHO5	P53879	331 aa	Known RBP	2.69	□□□□□ -1.98
CKA1	YIL035C	SXM1	Q04175	944 aa	Known RBP	2.69	□□□□□ -1.98
CKA1	YIL035C	SIL1	Q08199	421 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	SKI7	Q08491	747 aa	Predicted RBP	2.69	□□□□□ -1.98
CKA1	YIL035C	RRG1	Q12167	365 aa	Predicted RBP	2.69	□□□□□ -1.98
CKA1	YIL035C	SFI1	Q12369	946 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	YBL111C	Q3E7Y5	667 aa		2.69	□□□□□ -1.98
CKA1	YIL035C	HOM3	P10869	527 aa		2.68	□□□□□ -1.98
CKA1	YIL035C	RPL3	P14126	387 aa	Known RBP	2.68	□□□□□ -1.98
CKA1	YIL035C	ROX1	P25042	368 aa		2.68	□□□□□ -1.98
CKA1	YIL035C	RPC53	P25441	422 aa		2.68	□□□□□ -1.98
CKA1	YIL035C	HIR2	P32480	875 aa		2.68	□□□□□ -1.98
CKA1	YIL035C	PEX5	P35056	612 aa		2.68	□□□□□ -1.98
CKA1	YIL035C	LSM5	P40089	93 aa	Known RBP	2.68	□□□□□ -1.98
CKA1	YIL035C	GPD2	P41911	440 aa	Known RBP	2.68	□□□□□ -1.98
CKA1	YIL035C	YGR250C	P53316	781 aa	Known RBP	2.68	□□□□□ -1.98
CKA1	YIL035C	BCH1	Q05029	724 aa		2.68	□□□□□ -1.98
CKA1	YIL035C	REX4	Q08237	289 aa		2.68	□□□□□ -1.98
CKA1	YIL035C	PDX1	P16451	410 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	SPO12	P17123	173 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	SWI3	P32591	825 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	PXA2	P34230	853 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	BYE1	P36106	594 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	SRP72	P38688	640 aa	Known RBP	2.67	□□□□□ -1.98
CKA1	YIL035C	PHB2	P50085	310 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	YML6	P51998	286 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	RPA49	Q01080	415 aa	Predicted RBP	2.67	□□□□□ -1.98
CKA1	YIL035C	RTN2	Q12443	393 aa		2.67	□□□□□ -1.98
CKA1	YIL035C	MET17	P06106	444 aa		2.66	□□□□□ -1.98
CKA1	YIL035C	OPI1	P21957	404 aa		2.66	□□□□□ -1.98
CKA1	YIL035C	APE4	P38821	490 aa		2.66	□□□□□ -1.98
CKA1	YIL035C	PCF11	P39081	626 aa	Predicted RBP	2.66	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms