RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	RTP1	Q12751	981 aa		3.17	□□□□□ -1.9
SPO11	YHL022C	MRP7	P12687	371 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	LSB5	P25369	354 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	POP5	P28005	173 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	KAR9	P32526	644 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	RFC3	P38629	340 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	MDM30	Q05930	598 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	SGT1	Q08446	395 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	YDL012C	Q12489	107 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	RMD5	Q12508	421 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	YOL159C-A	Q3E769	90 aa		3.16	□□□□□ -1.9
SPO11	YHL022C	SNT1	P25357	1226 aa		3.15	□□□□□ -1.91
SPO11	YHL022C	SIN4	P32259	974 aa		3.15	□□□□□ -1.91
SPO11	YHL022C	YJR011C	P47086	261 aa	Predicted RBP	3.15	□□□□□ -1.91
SPO11	YHL022C	PHB2	P50085	310 aa		3.15	□□□□□ -1.91
SPO11	YHL022C	MNP1	P53163	194 aa	Predicted RBP	3.15	□□□□□ -1.91
SPO11	YHL022C	BET5	Q03630	159 aa		3.15	□□□□□ -1.91
SPO11	YHL022C	YRM1	Q12340	786 aa		3.15	□□□□□ -1.91
SPO11	YHL022C	CTR86	P25355	563 aa		3.14	□□□□□ -1.91
SPO11	YHL022C	CSE2	P33308	149 aa		3.14	□□□□□ -1.91
SPO11	YHL022C	OTU2	P38747	307 aa	Known RBP	3.14	□□□□□ -1.91
SPO11	YHL022C	RPS0B	P46654	252 aa	Known RBP	3.14	□□□□□ -1.91
SPO11	YHL022C	AZR1	P50080	613 aa		3.14	□□□□□ -1.91
SPO11	YHL022C	VTA1	Q06263	330 aa		3.14	□□□□□ -1.91
SPO11	YHL022C	AHC1	Q12433	566 aa		3.14	□□□□□ -1.91
SPO11	YHL022C	RAD57	P25301	460 aa		3.13	□□□□□ -1.91
SPO11	YHL022C	SAS3	P34218	831 aa		3.13	□□□□□ -1.91
SPO11	YHL022C	ARA1	P38115	344 aa		3.13	□□□□□ -1.91
SPO11	YHL022C	DLD2	P46681	530 aa	Known RBP	3.13	□□□□□ -1.91
SPO11	YHL022C	MRPL19	P53875	158 aa		3.13	□□□□□ -1.91
SPO11	YHL022C	IRC25	Q07951	179 aa		3.13	□□□□□ -1.91
SPO11	YHL022C	REX4	Q08237	289 aa		3.13	□□□□□ -1.91
SPO11	YHL022C	BUD21	Q08492	214 aa	Predicted RBP	3.13	□□□□□ -1.91
SPO11	YHL022C	SPO12	P17123	173 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	RHB1	P25378	209 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	BEM1	P29366	551 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	NUP2	P32499	720 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	RML2	P32611	393 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	HCS1	P34243	683 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	MRP21	P38175	177 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	NDE1	P40215	560 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	SKI7	Q08491	747 aa	Predicted RBP	3.12	□□□□□ -1.91
SPO11	YHL022C	RTN2	Q12443	393 aa		3.12	□□□□□ -1.91
SPO11	YHL022C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
SPO11	YHL022C	JLP2	P40206	208 aa		3.11	□□□□□ -1.91
SPO11	YHL022C	GAB1	P41733	394 aa		3.11	□□□□□ -1.91
SPO11	YHL022C	FMS1	P50264	508 aa		3.11	□□□□□ -1.91
SPO11	YHL022C	RHO5	P53879	331 aa	Known RBP	3.11	□□□□□ -1.91
SPO11	YHL022C	APJ1	P53940	528 aa		3.11	□□□□□ -1.91
SPO11	YHL022C	CUE5	Q08412	411 aa	Known RBP	3.11	□□□□□ -1.91
SPO11	YHL022C	VAM3	Q12241	283 aa		3.11	□□□□□ -1.91
SPO11	YHL022C	GEX1	P25596	615 aa		3.1	□□□□□ -1.91
SPO11	YHL022C	KRE2	P27809	442 aa		3.1	□□□□□ -1.91
SPO11	YHL022C	NPL6	P32832	435 aa		3.1	□□□□□ -1.91
SPO11	YHL022C	SOR1	P35497	357 aa	Known RBP	3.1	□□□□□ -1.91
SPO11	YHL022C	AIM10	P39965	576 aa	Known RBP	3.1	□□□□□ -1.91
SPO11	YHL022C	UTP18	P40362	594 aa	Predicted RBP	3.1	□□□□□ -1.91
SPO11	YHL022C	YJR085C	P47131	105 aa	Known RBP	3.1	□□□□□ -1.91
SPO11	YHL022C	SOR2	Q07786	357 aa		3.1	□□□□□ -1.91
SPO11	YHL022C	SPO7	P18410	259 aa		3.09	□□□□□ -1.91
SPO11	YHL022C	MDE1	P47095	244 aa		3.09	□□□□□ -1.91
SPO11	YHL022C	GPI15	P53961	229 aa		3.09	□□□□□ -1.91
SPO11	YHL022C	OAZ1	Q02803	292 aa		3.09	□□□□□ -1.91
SPO11	YHL022C	GIP3	Q03016	1276 aa		3.09	□□□□□ -1.91
SPO11	YHL022C	TAF11	Q04226	346 aa		3.09	□□□□□ -1.91
SPO11	YHL022C	BCH1	Q05029	724 aa		3.09	□□□□□ -1.91
SPO11	YHL022C	PGA3	Q12746	312 aa	Known RBP	3.09	□□□□□ -1.91
SPO11	YHL022C	RED1	P14291	827 aa		3.08	□□□□□ -1.92
SPO11	YHL022C	ERG3	P32353	365 aa		3.08	□□□□□ -1.92
SPO11	YHL022C	SMY1	P32364	656 aa	Known RBP	3.08	□□□□□ -1.92
SPO11	YHL022C	HIR2	P32480	875 aa		3.08	□□□□□ -1.92
SPO11	YHL022C	APE3	P37302	537 aa	Known RBP	3.08	□□□□□ -1.92
SPO11	YHL022C	NUP116	Q02630	1113 aa		3.08	□□□□□ -1.92
SPO11	YHL022C	ARX1	Q03862	593 aa	Known RBP	3.08	□□□□□ -1.92
SPO11	YHL022C	RRP45	Q05636	305 aa	Known RBP	3.08	□□□□□ -1.92
SPO11	YHL022C	RKM1	Q08961	583 aa	Predicted RBP	3.08	□□□□□ -1.92
SPO11	YHL022C	IZH2	Q12442	317 aa		3.08	□□□□□ -1.92
SPO11	YHL022C	NAM2	P11325	894 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	CLN1	P20437	546 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	PCF11	P39081	626 aa	Predicted RBP	3.07	□□□□□ -1.92
SPO11	YHL022C	YAL037W	P39728	267 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	MIG3	P39943	394 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	COS5	P47187	383 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	COS7	Q07788	383 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	PLP2	Q12017	286 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	SRL2	Q12020	392 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	HSP42	Q12329	375 aa		3.07	□□□□□ -1.92
SPO11	YHL022C	CLB3	P24870	427 aa		3.06	□□□□□ -1.92
SPO11	YHL022C	PHO86	P46956	311 aa		3.06	□□□□□ -1.92
SPO11	YHL022C	SFH5	P47008	294 aa		3.06	□□□□□ -1.92
SPO11	YHL022C	YGL138C	P53122	345 aa		3.06	□□□□□ -1.92
SPO11	YHL022C	ADA2	Q02336	434 aa		3.06	□□□□□ -1.92
SPO11	YHL022C	TAF12	Q03761	539 aa		3.06	□□□□□ -1.92
SPO11	YHL022C	CLC1	P17891	233 aa		3.05	□□□□□ -1.92
SPO11	YHL022C	YME2	P32843	850 aa		3.05	□□□□□ -1.92
SPO11	YHL022C	NTC20	P38302	140 aa	Predicted RBP	3.05	□□□□□ -1.92
SPO11	YHL022C	RRP4	P38792	359 aa	Known RBP	3.05	□□□□□ -1.92
SPO11	YHL022C	SBE22	P38814	852 aa		3.05	□□□□□ -1.92
SPO11	YHL022C	MTQ1	P53944	314 aa		3.05	□□□□□ -1.92
SPO11	YHL022C	FAB1	P34756	2278 aa		3.04	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms