RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YFL064CP43540 174 aa1.63□□□□□ -2.15
TRM3YDL112W MLC2Q06580 163 aa1.63□□□□□ -2.15
TRM3YDL112W TRM8Q12009 286 aa1.63□□□□□ -2.15
TRM3YDL112W PUS9Q12069 462 aa1.63□□□□□ -2.15
TRM3YDL112W LYS21Q12122 440 aaKnown RBP1.63□□□□□ -2.15
TRM3YDL112W HUA2Q12134 243 aa1.63□□□□□ -2.15
TRM3YDL112W RRP42Q12277 265 aaPredicted RBP1.63□□□□□ -2.15
TRM3YDL112W YBL111CQ3E7Y5 667 aa1.63□□□□□ -2.15
TRM3YDL112W BRR1Q99177 341 aaPredicted RBP1.63□□□□□ -2.15
TRM3YDL112W CYR1P08678 2026 aaKnown RBP1.63□□□□□ -2.15
TRM3YDL112W DBF20P32328 564 aa1.62□□□□□ -2.15
TRM3YDL112W PET309P32522 965 aaPredicted RBP1.62□□□□□ -2.15
TRM3YDL112W SEF1P34228 1148 aa1.62□□□□□ -2.15
TRM3YDL112W DEF1P35732 738 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W SWD1P39706 426 aa1.62□□□□□ -2.15
TRM3YDL112W HAT2P39984 401 aa1.62□□□□□ -2.15
TRM3YDL112W ATG36P46983 293 aa1.62□□□□□ -2.15
TRM3YDL112W MPS1P54199 764 aa1.62□□□□□ -2.15
TRM3YDL112W RRP45Q05636 305 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W VTA1Q06263 330 aa1.62□□□□□ -2.15
TRM3YDL112W TEN1Q07921 160 aa1.62□□□□□ -2.15
TRM3YDL112W YOL019WQ08157 551 aa1.62□□□□□ -2.15
TRM3YDL112W ATG9Q12142 997 aa1.62□□□□□ -2.15
TRM3YDL112W YOR032W-AQ8TGS1 66 aa1.62□□□□□ -2.15
TRM3YDL112W YLR302CO13544 120 aa1.62□□□□□ -2.15
TRM3YDL112W YAR066WP0CX18 203 aa1.62□□□□□ -2.15
TRM3YDL112W YHR214WP0CX19 203 aa1.62□□□□□ -2.15
TRM3YDL112W GRR1P24814 1151 aa1.62□□□□□ -2.15
TRM3YDL112W RBK1P25332 333 aa1.62□□□□□ -2.15
TRM3YDL112W GFD2P25370 566 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W NDI1P32340 513 aa1.62□□□□□ -2.15
TRM3YDL112W MKK1P32490 508 aa1.62□□□□□ -2.15
TRM3YDL112W MIA40P36046 403 aa1.62□□□□□ -2.15
TRM3YDL112W MRPL10P36520 322 aa1.62□□□□□ -2.15
TRM3YDL112W FLO5P38894 1075 aa1.62□□□□□ -2.15
TRM3YDL112W SAP1P39955 897 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W YER034WP40022 185 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W LCP5P40079 357 aaPredicted RBP1.62□□□□□ -2.15
TRM3YDL112W ALG8P40351 577 aa1.62□□□□□ -2.15
TRM3YDL112W QRI7P43122 407 aa1.62□□□□□ -2.15
TRM3YDL112W HOC1P47124 396 aa1.62□□□□□ -2.15
TRM3YDL112W TRF5P48561 642 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W BRO1P48582 844 aa1.62□□□□□ -2.15
TRM3YDL112W YML6P51998 286 aa1.62□□□□□ -2.15
TRM3YDL112W SAP4P53036 818 aa1.62□□□□□ -2.15
TRM3YDL112W YGR127WP53275 312 aa1.62□□□□□ -2.15
TRM3YDL112W CPR6P53691 371 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W ESF2P53743 316 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W BET4Q00618 327 aa1.62□□□□□ -2.15
TRM3YDL112W TDA9Q04545 1251 aa1.62□□□□□ -2.15
TRM3YDL112W VPS38Q05919 439 aa1.62□□□□□ -2.15
TRM3YDL112W YDL121CQ07541 149 aa1.62□□□□□ -2.15
TRM3YDL112W CUE5Q08412 411 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W RAX1Q08760 435 aa1.62□□□□□ -2.15
TRM3YDL112W GLE1Q12315 538 aa1.62□□□□□ -2.15
TRM3YDL112W YER175W-AQ8TGU4 54 aa1.62□□□□□ -2.15
TRM3YDL112W RAD57P25301 460 aa1.62□□□□□ -2.15
TRM3YDL112W CMK1P27466 446 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W TPS2P31688 896 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W RKM3P38222 552 aa1.62□□□□□ -2.15
TRM3YDL112W SCC4P40090 624 aa1.62□□□□□ -2.15
TRM3YDL112W SAE2P46946 345 aa1.62□□□□□ -2.15
TRM3YDL112W CTK3P46963 296 aaPredicted RBP1.62□□□□□ -2.15
TRM3YDL112W TAX4P47030 604 aa1.62□□□□□ -2.15
TRM3YDL112W OCA1P50946 238 aaPredicted RBP1.62□□□□□ -2.15
TRM3YDL112W YML119WQ03208 357 aa1.62□□□□□ -2.15
TRM3YDL112W VMS1Q04311 632 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W RCO1Q04779 684 aa1.62□□□□□ -2.15
TRM3YDL112W BCH1Q05029 724 aa1.62□□□□□ -2.15
TRM3YDL112W SLD7Q08457 257 aa1.62□□□□□ -2.15
TRM3YDL112W PAR32Q12515 295 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W RPL7AP05737 244 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W AMD2P22580 549 aa1.62□□□□□ -2.15
TRM3YDL112W SPS22P25380 463 aa1.62□□□□□ -2.15
TRM3YDL112W YCR102CP25608 368 aa1.62□□□□□ -2.15
TRM3YDL112W HXT3P32466 567 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W IME2P32581 645 aa1.62□□□□□ -2.15
TRM3YDL112W PRP18P33411 251 aaPredicted RBP1.62□□□□□ -2.15
TRM3YDL112W SOL2P37262 315 aa1.62□□□□□ -2.15
TRM3YDL112W CTP1P38152 299 aa1.62□□□□□ -2.15
TRM3YDL112W GPI16P38875 610 aa1.62□□□□□ -2.15
TRM3YDL112W LYS1P38998 373 aaRIP-Chip data1.62□□□□□ -2.15not detected
TRM3YDL112W GAT1P43574 510 aa1.62□□□□□ -2.15
TRM3YDL112W IKS1P47042 667 aa1.62□□□□□ -2.15
TRM3YDL112W FRE4P53746 719 aa1.62□□□□□ -2.15
TRM3YDL112W YMR034CQ05131 434 aaPredicted RBP1.62□□□□□ -2.15
TRM3YDL112W MDM30Q05930 598 aa1.62□□□□□ -2.15
TRM3YDL112W YPL272CQ08984 517 aa1.62□□□□□ -2.15
TRM3YDL112W RPL7BQ12213 244 aaKnown RBP1.62□□□□□ -2.15
TRM3YDL112W SLH1P53327 1967 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W TPK2P06245 380 aa1.61□□□□□ -2.15
TRM3YDL112W BCY1P07278 416 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W FUM1P08417 488 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W ATG15P25641 520 aa1.61□□□□□ -2.15
TRM3YDL112W FAA1P30624 700 aaKnown RBP1.61□□□□□ -2.15
TRM3YDL112W YMC1P32331 307 aa1.61□□□□□ -2.15
TRM3YDL112W ATO2P32907 282 aa1.61□□□□□ -2.15
TRM3YDL112W MOH1P38191 138 aa1.61□□□□□ -2.15
TRM3YDL112W YMR134WP40207 237 aa1.61□□□□□ -2.15
TRM3YDL112W NDE1P40215 560 aa1.61□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms