RNA–Protein interactions for RNA: YOR316C

COT1, Transcript of Vacuolar transporter that mediates zinc transport into the vacuole, yeast

Gene COT1, Length 1,320 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
COT1	YOR316C	COG1	P53079	417 aa		4.84	□□□□□ -1.63
COT1	YOR316C	GND2	P53319	492 aa		4.84	□□□□□ -1.63
COT1	YOR316C	ARE2	P53629	642 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	KTR5	P53966	522 aa	Predicted RBP	4.84	□□□□□ -1.63
COT1	YOR316C	PET117	Q02771	107 aa		4.84	□□□□□ -1.63
COT1	YOR316C	TRS31	Q03337	283 aa		4.84	□□□□□ -1.63
COT1	YOR316C	PRP3	Q03338	469 aa	Predicted RBP	4.84	□□□□□ -1.63
COT1	YOR316C	RPN9	Q04062	393 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	ADE13	Q05911	482 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	MDM30	Q05930	598 aa		4.84	□□□□□ -1.63
COT1	YOR316C	YLR224W	Q05947	369 aa		4.84	□□□□□ -1.63
COT1	YOR316C	NOP12	Q08208	459 aa	Known RBP	4.84	□□□□□ -1.63
COT1	YOR316C	PFA4	Q12006	378 aa		4.84	□□□□□ -1.63
COT1	YOR316C	SCM3	Q12334	223 aa		4.84	□□□□□ -1.63
COT1	YOR316C	HMG1	P12683	1054 aa		4.83	□□□□□ -1.64
COT1	YOR316C	HEM15	P16622	393 aa		4.83	□□□□□ -1.64
COT1	YOR316C	ATP12	P22135	325 aa		4.83	□□□□□ -1.64
COT1	YOR316C	SAN1	P22470	610 aa		4.83	□□□□□ -1.64
COT1	YOR316C	KRR1	P25586	316 aa	Predicted RBP	4.83	□□□□□ -1.64
COT1	YOR316C	CTS1	P29029	562 aa		4.83	□□□□□ -1.64
COT1	YOR316C	TPS2	P31688	896 aa	Known RBP	4.83	□□□□□ -1.64
COT1	YOR316C	RIM1	P32445	135 aa	Known RBP	4.83	□□□□□ -1.64
COT1	YOR316C	REC104	P33323	182 aa		4.83	□□□□□ -1.64
COT1	YOR316C	LST4	P34239	828 aa		4.83	□□□□□ -1.64
COT1	YOR316C	FTH1	P38310	465 aa		4.83	□□□□□ -1.64
COT1	YOR316C	YBR259W	P38338	688 aa		4.83	□□□□□ -1.64
COT1	YOR316C	YHR210C	P38893	341 aa		4.83	□□□□□ -1.64
COT1	YOR316C	PLB1	P39105	664 aa		4.83	□□□□□ -1.64
COT1	YOR316C	MEP1	P40260	492 aa		4.83	□□□□□ -1.64
COT1	YOR316C	YIL086C	P40503	102 aa		4.83	□□□□□ -1.64
COT1	YOR316C	SEC28	P40509	296 aa	Known RBP	4.83	□□□□□ -1.64
COT1	YOR316C	CAF16	P43569	289 aa		4.83	□□□□□ -1.64
COT1	YOR316C	GAT1	P43574	510 aa		4.83	□□□□□ -1.64
COT1	YOR316C	RNT1	Q02555	471 aa		4.83	□□□□□ -1.64
COT1	YOR316C	FDC1	Q03034	503 aa		4.83	□□□□□ -1.64
COT1	YOR316C	NHX1	Q04121	633 aa		4.83	□□□□□ -1.64
COT1	YOR316C	VHS3	Q08438	674 aa		4.83	□□□□□ -1.64
COT1	YOR316C	BUD7	Q08754	746 aa		4.83	□□□□□ -1.64
COT1	YOR316C	LEU9	Q12166	604 aa	Known RBP	4.83	□□□□□ -1.64
COT1	YOR316C	YOL114C	Q12322	202 aa		4.83	□□□□□ -1.64
COT1	YOR316C	GTT2	Q12390	233 aa		4.83	□□□□□ -1.64
COT1	YOR316C	UBR1	P19812	1950 aa		4.83	□□□□□ -1.64
COT1	YOR316C	RPP2A	P05319	106 aa	Known RBP	4.82	□□□□□ -1.64
COT1	YOR316C	RAD1	P06777	1100 aa		4.82	□□□□□ -1.64
COT1	YOR316C	FUR1	P18562	216 aa	Known RBP	4.82	□□□□□ -1.64
COT1	YOR316C	GRR1	P24814	1151 aa		4.82	□□□□□ -1.64
COT1	YOR316C	HRR25	P29295	494 aa	Known RBP	4.82	□□□□□ -1.64
COT1	YOR316C	DBP8	P38719	431 aa		4.82	□□□□□ -1.64
COT1	YOR316C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
COT1	YOR316C	SEO1	P39709	593 aa		4.82	□□□□□ -1.64
COT1	YOR316C	ALG8	P40351	577 aa		4.82	□□□□□ -1.64
COT1	YOR316C	IME4	P41833	600 aa		4.82	□□□□□ -1.64
COT1	YOR316C	MIC19	P43594	170 aa		4.82	□□□□□ -1.64
COT1	YOR316C	TRM9	P49957	279 aa		4.82	□□□□□ -1.64
COT1	YOR316C	VPS73	P53142	486 aa	Known RBP	4.82	□□□□□ -1.64
COT1	YOR316C	ARX1	Q03862	593 aa	Known RBP	4.82	□□□□□ -1.64
COT1	YOR316C	CDC123	Q05791	360 aa		4.82	□□□□□ -1.64
COT1	YOR316C	STE23	Q06010	1027 aa		4.82	□□□□□ -1.64
COT1	YOR316C	VTA1	Q06263	330 aa		4.82	□□□□□ -1.64
COT1	YOR316C	ATG33	Q06485	197 aa		4.82	□□□□□ -1.64
COT1	YOR316C	RSC3	Q06639	885 aa		4.82	□□□□□ -1.64
COT1	YOR316C	RAX1	Q08760	435 aa		4.82	□□□□□ -1.64
COT1	YOR316C	SMF3	Q12078	473 aa	Predicted RBP	4.82	□□□□□ -1.64
COT1	YOR316C	YOR012W	Q12351	137 aa		4.82	□□□□□ -1.64
COT1	YOR316C	CDC26	P14724	124 aa		4.81	□□□□□ -1.64
COT1	YOR316C	RFA1	P22336	621 aa	Known RBP	4.81	□□□□□ -1.64
COT1	YOR316C	PRP18	P33411	251 aa	Predicted RBP	4.81	□□□□□ -1.64
COT1	YOR316C	SHM2	P37291	469 aa	Known RBP	4.81	□□□□□ -1.64
COT1	YOR316C	LDB7	P38210	180 aa		4.81	□□□□□ -1.64
COT1	YOR316C	SPC97	P38863	823 aa		4.81	□□□□□ -1.64
COT1	YOR316C	SSP120	P39931	234 aa	Known RBP	4.81	□□□□□ -1.64
COT1	YOR316C	SMX2	P40204	77 aa	Known RBP	4.81	□□□□□ -1.64
COT1	YOR316C	GID8	P40208	455 aa		4.81	□□□□□ -1.64
COT1	YOR316C	PHB1	P40961	287 aa		4.81	□□□□□ -1.64
COT1	YOR316C	YJL107C	P42947	387 aa		4.81	□□□□□ -1.64
COT1	YOR316C	RET2	P43621	546 aa		4.81	□□□□□ -1.64
COT1	YOR316C	PET130	P47065	347 aa		4.81	□□□□□ -1.64
COT1	YOR316C	ATP22	P50273	684 aa	Predicted RBP	4.81	□□□□□ -1.64
COT1	YOR316C	SLT2	Q00772	484 aa		4.81	□□□□□ -1.64
COT1	YOR316C	ECM9	Q02202	377 aa		4.81	□□□□□ -1.64
COT1	YOR316C	LAG2	Q92325	660 aa		4.81	□□□□□ -1.64
COT1	YOR316C	HSH49	Q99181	213 aa	Predicted RBP	4.81	□□□□□ -1.64
COT1	YOR316C	STT4	P37297	1900 aa		4.81	□□□□□ -1.64
COT1	YOR316C	RNA1	P11745	407 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	AAC3	P18238	307 aa		4.8	□□□□□ -1.64
COT1	YOR316C	YSR3	P23501	404 aa		4.8	□□□□□ -1.64
COT1	YOR316C	ILV6	P25605	309 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	NAM9	P27929	486 aa		4.8	□□□□□ -1.64
COT1	YOR316C	MF(ALPHA)2	P32435	120 aa		4.8	□□□□□ -1.64
COT1	YOR316C	ORC2	P32833	620 aa		4.8	□□□□□ -1.64
COT1	YOR316C	YKL100C	P34248	587 aa		4.8	□□□□□ -1.64
COT1	YOR316C	MUD2	P36084	527 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	SET3	P36124	751 aa		4.8	□□□□□ -1.64
COT1	YOR316C	SOL2	P37262	315 aa		4.8	□□□□□ -1.64
COT1	YOR316C	ETR1	P38071	380 aa		4.8	□□□□□ -1.64
COT1	YOR316C	TRM7	P38238	310 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	CCT2	P39076	527 aa	Known RBP	4.8	□□□□□ -1.64
COT1	YOR316C	YEL073C	P39974	107 aa		4.8	□□□□□ -1.64
COT1	YOR316C	HAT2	P39984	401 aa		4.8	□□□□□ -1.64
COT1	YOR316C	NOP16	P40007	231 aa	Known RBP	4.8	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 134.7 ms