RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W TY1B-AO13527 1196 aaKnown RBP3.5□□□□□ -1.85
TRM112YNR046W SCEIP03882 235 aa3.5□□□□□ -1.85
TRM112YNR046W PDE2P06776 526 aa3.5□□□□□ -1.85
TRM112YNR046W LPD1P09624 499 aaKnown RBP3.5□□□□□ -1.85
TRM112YNR046W YAR066WP0CX18 203 aa3.5□□□□□ -1.85
TRM112YNR046W YHR214WP0CX19 203 aa3.5□□□□□ -1.85
TRM112YNR046W YCR043CP25361 127 aa3.5□□□□□ -1.85
TRM112YNR046W PPZ1P26570 692 aa3.5□□□□□ -1.85
TRM112YNR046W HEL1P36113 551 aa3.5□□□□□ -1.85
TRM112YNR046W RIM2P38127 377 aa3.5□□□□□ -1.85
TRM112YNR046W ZTA1P38230 334 aaKnown RBP3.5□□□□□ -1.85
TRM112YNR046W GDT1P38301 280 aaPredicted RBP3.5□□□□□ -1.85
TRM112YNR046W CAJ1P39101 391 aa3.5□□□□□ -1.85
TRM112YNR046W ISC1P40015 477 aaKnown RBP3.5□□□□□ -1.85
TRM112YNR046W IKS1P47042 667 aa3.5□□□□□ -1.85
TRM112YNR046W MDM30Q05930 598 aa3.5□□□□□ -1.85
TRM112YNR046W REX4Q08237 289 aa3.5□□□□□ -1.85
TRM112YNR046W SKS1Q12505 502 aa3.5□□□□□ -1.85
TRM112YNR046W NAT1P12945 854 aaKnown RBP3.49□□□□□ -1.85
TRM112YNR046W PMR1P13586 950 aa3.49□□□□□ -1.85
TRM112YNR046W CRM1P30822 1084 aaKnown RBP3.49□□□□□ -1.85
TRM112YNR046W RIM1P32445 135 aaKnown RBP3.49□□□□□ -1.85
TRM112YNR046W ECM25P32525 599 aa3.49□□□□□ -1.85
TRM112YNR046W RRP1P35178 278 aaPredicted RBP3.49□□□□□ -1.85
TRM112YNR046W YPT53P36019 220 aa3.49□□□□□ -1.85
TRM112YNR046W FRE2P36033 711 aa3.49□□□□□ -1.85
TRM112YNR046W RRN10P38204 145 aa3.49□□□□□ -1.85
TRM112YNR046W OLA1P38219 394 aaKnown RBP3.49□□□□□ -1.85
TRM112YNR046W SAD1P43589 448 aa3.49□□□□□ -1.85
TRM112YNR046W TRS85P46944 698 aa3.49□□□□□ -1.85
TRM112YNR046W PCP1P53259 346 aa3.49□□□□□ -1.85
TRM112YNR046W OCA2P53949 197 aa3.49□□□□□ -1.85
TRM112YNR046W RLI1Q03195 608 aaKnown RBP3.49□□□□□ -1.85
TRM112YNR046W YLR456WQ06199 204 aa3.49□□□□□ -1.85
TRM112YNR046W AFT2Q08957 416 aa3.49□□□□□ -1.85
TRM112YNR046W CYB2P00175 591 aa3.48□□□□□ -1.85
TRM112YNR046W RPL6BP05739 176 aaKnown RBP3.48□□□□□ -1.85
TRM112YNR046W YML002WP0CF17 737 aa3.48□□□□□ -1.85
TRM112YNR046W MTF1P14908 341 aaKnown RBP3.48□□□□□ -1.85
TRM112YNR046W YCR100CP25606 316 aa3.48□□□□□ -1.85
TRM112YNR046W DPH2P32461 534 aa3.48□□□□□ -1.85
TRM112YNR046W PTR2P32901 601 aa3.48□□□□□ -1.85
TRM112YNR046W SOR1P35497 357 aaKnown RBP3.48□□□□□ -1.85
TRM112YNR046W ASC1P38011 319 aaKnown RBP3.48□□□□□ -1.85
TRM112YNR046W WSS1P38838 269 aa3.48□□□□□ -1.85
TRM112YNR046W FAD1P38913 306 aa3.48□□□□□ -1.85
TRM112YNR046W SHO1P40073 367 aa3.48□□□□□ -1.85
TRM112YNR046W GWT1P47026 490 aa3.48□□□□□ -1.85
TRM112YNR046W ATP22P50273 684 aaPredicted RBP3.48□□□□□ -1.85
TRM112YNR046W YIP1P53039 248 aa3.48□□□□□ -1.85
TRM112YNR046W MLC1P53141 149 aa3.48□□□□□ -1.85
TRM112YNR046W PIB2P53191 635 aa3.48□□□□□ -1.85
TRM112YNR046W KTR5P53966 522 aaPredicted RBP3.48□□□□□ -1.85
TRM112YNR046W RPL6AQ02326 176 aaKnown RBP3.48□□□□□ -1.85
TRM112YNR046W RPM2Q02773 1202 aa3.48□□□□□ -1.85
TRM112YNR046W ODC1Q03028 310 aa3.48□□□□□ -1.85
TRM112YNR046W TAF12Q03761 539 aa3.48□□□□□ -1.85
TRM112YNR046W RPN9Q04062 393 aaKnown RBP3.48□□□□□ -1.85
TRM112YNR046W PPM1Q04081 328 aa3.48□□□□□ -1.85
TRM112YNR046W SOR2Q07786 357 aa3.48□□□□□ -1.85
TRM112YNR046W MUM3Q08750 479 aa3.48□□□□□ -1.85
TRM112YNR046W RUP1Q12242 671 aa3.48□□□□□ -1.85
TRM112YNR046W NDI1P32340 513 aa3.47□□□□□ -1.85
TRM112YNR046W SMY1P32364 656 aaKnown RBP3.47□□□□□ -1.85
TRM112YNR046W NDC1P32500 655 aa3.47□□□□□ -1.85
TRM112YNR046W DAD2P36162 133 aa3.47□□□□□ -1.85
TRM112YNR046W LYS1P38998 373 aaRIP-Chip data3.47□□□□□ -1.85not detected
TRM112YNR046W YND1P40009 630 aa3.47□□□□□ -1.85
TRM112YNR046W ALG8P40351 577 aa3.47□□□□□ -1.85
TRM112YNR046W YGR016WP53209 190 aa3.47□□□□□ -1.85
TRM112YNR046W LSC1P53598 329 aaKnown RBP3.47□□□□□ -1.85
TRM112YNR046W RHO5P53879 331 aaKnown RBP3.47□□□□□ -1.85
TRM112YNR046W MPS1P54199 764 aa3.47□□□□□ -1.85
TRM112YNR046W YPL068CQ02749 293 aa3.47□□□□□ -1.85
TRM112YNR046W PRP42Q03776 544 aaKnown RBP3.47□□□□□ -1.85
TRM112YNR046W NUP53Q03790 475 aa3.47□□□□□ -1.85
TRM112YNR046W GRS2Q06817 618 aa3.47□□□□□ -1.85
TRM112YNR046W SMF3Q12078 473 aaPredicted RBP3.47□□□□□ -1.85
TRM112YNR046W YLL056CQ12177 298 aa3.47□□□□□ -1.85
TRM112YNR046W FRE6Q12473 712 aa3.47□□□□□ -1.85
TRM112YNR046W ADE4P04046 510 aaKnown RBP3.46□□□□□ -1.86
TRM112YNR046W ARO3P14843 370 aaKnown RBP3.46□□□□□ -1.86
TRM112YNR046W CDC23P16522 626 aa3.46□□□□□ -1.86
TRM112YNR046W HSP104P31539 908 aaKnown RBP3.46□□□□□ -1.86
TRM112YNR046W YCR041WP37265 110 aa3.46□□□□□ -1.86
TRM112YNR046W EPL1P43572 832 aa3.46□□□□□ -1.86
TRM112YNR046W PHO86P46956 311 aa3.46□□□□□ -1.86
TRM112YNR046W HMS2P47175 358 aa3.46□□□□□ -1.86
TRM112YNR046W SSN8P47821 323 aa3.46□□□□□ -1.86
TRM112YNR046W GIP3Q03016 1276 aa3.46□□□□□ -1.86
TRM112YNR046W SGT1Q08446 395 aa3.46□□□□□ -1.86
TRM112YNR046W YDR061WQ12298 539 aa3.46□□□□□ -1.86
TRM112YNR046W ARG4P04076 463 aaPredicted RBP3.45□□□□□ -1.86
TRM112YNR046W SPC110P32380 944 aa3.45□□□□□ -1.86
TRM112YNR046W LAS1P36146 502 aaPredicted RBP3.45□□□□□ -1.86
TRM112YNR046W PCF11P39081 626 aaPredicted RBP3.45□□□□□ -1.86
TRM112YNR046W YJL070CP40361 888 aa3.45□□□□□ -1.86
TRM112YNR046W RTT101P47050 842 aa3.45□□□□□ -1.86
TRM112YNR046W BRO1P48582 844 aa3.45□□□□□ -1.86
TRM112YNR046W YPL107WQ02873 248 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms