RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W DRS1P32892 752 aaKnown RBP10.83□□□□□ -0.68
TRM112YNR046W MTC1P47018 478 aaKnown RBP10.46□□□□□ -0.73
TRM112YNR046W BFR2Q06631 534 aaKnown RBP9.51□□□□□ -0.89
TRM112YNR046W TFA1P36100 482 aa9.14□□□□□ -0.95
TRM112YNR046W DIP2Q12220 943 aaPredicted RBP9.12□□□□□ -0.95
TRM112YNR046W AVT3P36062 692 aa9.04□□□□□ -0.96
TRM112YNR046W FAP1P53971 965 aa8.55□□□□□ -1.04
TRM112YNR046W RSE1Q04693 1361 aaKnown RBP8.54□□□□□ -1.04
TRM112YNR046W ISW2Q08773 1120 aa8.49□□□□□ -1.05
TRM112YNR046W RPG1P38249 964 aaKnown RBP8.33□□□□□ -1.08
TRM112YNR046W PRI1P10363 409 aa8.22□□□□□ -1.09
TRM112YNR046W RQC2Q12532 1038 aaKnown RBP8.2□□□□□ -1.1
TRM112YNR046W RPL17AP05740 184 aaKnown RBP8.18□□□□□ -1.1
TRM112YNR046W RPL17BP46990 184 aaKnown RBP8.18□□□□□ -1.1
TRM112YNR046W REB1P21538 810 aa8.08□□□□□ -1.12
TRM112YNR046W AAD16Q02895 342 aa8.08□□□□□ -1.12
TRM112YNR046W PRY3P47033 881 aa8.06□□□□□ -1.12
TRM112YNR046W RIM101P33400 625 aa7.85□□□□□ -1.15
TRM112YNR046W SPT21P35209 758 aa7.85□□□□□ -1.15
TRM112YNR046W TSR3Q12094 313 aaKnown RBP7.83□□□□□ -1.16
TRM112YNR046W PTP3P40048 928 aa7.77□□□□□ -1.17
TRM112YNR046W SSP1P38871 571 aa7.66□□□□□ -1.18
TRM112YNR046W YCK3P39962 524 aa7.66□□□□□ -1.18
TRM112YNR046W DMA1P38823 416 aa7.64□□□□□ -1.19
TRM112YNR046W OXP1P28273 1286 aa7.59□□□□□ -1.19
TRM112YNR046W MRPL32P25348 183 aa7.58□□□□□ -1.2
TRM112YNR046W YIL055CP40523 627 aaKnown RBP7.58□□□□□ -1.2
TRM112YNR046W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.56□□□□□ -1.2not detected
TRM112YNR046W YAH1Q12184 172 aaKnown RBP7.55□□□□□ -1.2
TRM112YNR046W YKR023WP36119 530 aaKnown RBP7.54□□□□□ -1.2
TRM112YNR046W HAA1Q12753 694 aaKnown RBP7.5□□□□□ -1.21
TRM112YNR046W YLR271WQ06152 274 aa7.44□□□□□ -1.22
TRM112YNR046W RSM7P47150 247 aa7.42□□□□□ -1.22
TRM112YNR046W TFC8Q12308 588 aa7.41□□□□□ -1.22
TRM112YNR046W HOP09932 586 aa7.4□□□□□ -1.22
TRM112YNR046W MGA2P40578 1113 aa7.37□□□□□ -1.23
TRM112YNR046W DCD1P06773 312 aa7.31□□□□□ -1.24
TRM112YNR046W CDC27P38042 758 aa7.3□□□□□ -1.24
TRM112YNR046W AI2P03876 854 aa7.25□□□□□ -1.25
TRM112YNR046W BBC1P47068 1157 aa7.23□□□□□ -1.25
TRM112YNR046W CST9Q06032 482 aa7.22□□□□□ -1.25
TRM112YNR046W PSD2P53037 1138 aaKnown RBP7.21□□□□□ -1.26
TRM112YNR046W BCH2P36122 765 aa7.2□□□□□ -1.26
TRM112YNR046W LEO1P38439 464 aa7.15□□□□□ -1.26
TRM112YNR046W SAS10Q12136 610 aaPredicted RBP7.14□□□□□ -1.27
TRM112YNR046W EPS1P40557 701 aa7.1□□□□□ -1.27
TRM112YNR046W TAF7Q05021 590 aa7.08□□□□□ -1.28
TRM112YNR046W BDF1P35817 686 aa7.05□□□□□ -1.28
TRM112YNR046W LEU3P08638 886 aa7.04□□□□□ -1.28
TRM112YNR046W MRM1P25270 412 aa7.04□□□□□ -1.28
TRM112YNR046W SCY1P53009 804 aa7.04□□□□□ -1.28
TRM112YNR046W UBP10P53874 792 aaPredicted RBP7.02□□□□□ -1.29
TRM112YNR046W RAM2P29703 316 aa7.01□□□□□ -1.29
TRM112YNR046W RTG3P38165 486 aa7□□□□□ -1.29
TRM112YNR046W YGL015CP33199 130 aa6.99□□□□□ -1.29
TRM112YNR046W MAP2P38174 421 aaKnown RBP6.97□□□□□ -1.29
TRM112YNR046W SET1P38827 1080 aaKnown RBP6.97□□□□□ -1.29
TRM112YNR046W IFH1P39520 1085 aa6.94□□□□□ -1.3
TRM112YNR046W RCR1P38212 213 aa6.93□□□□□ -1.3
TRM112YNR046W SLX5P32828 619 aaKnown RBP6.92□□□□□ -1.3
TRM112YNR046W CKB1P43639 278 aa6.92□□□□□ -1.3
TRM112YNR046W MAK11P20484 414 aaKnown RBP6.91□□□□□ -1.3
TRM112YNR046W SPB4P25808 606 aaPredicted RBP6.89□□□□□ -1.31
TRM112YNR046W VPS70P47161 811 aa6.88□□□□□ -1.31
TRM112YNR046W YPR148CQ06523 435 aa6.88□□□□□ -1.31
TRM112YNR046W RPN1P38764 993 aaKnown RBP6.86□□□□□ -1.31
TRM112YNR046W VPS29P38759 282 aa6.85□□□□□ -1.31
TRM112YNR046W YMR1P47147 688 aaKnown RBP RIP-Chip data6.82□□□□□ -1.32not detected
TRM112YNR046W NOP53Q12080 455 aaKnown RBP6.82□□□□□ -1.32
TRM112YNR046W COQ8P27697 501 aa6.81□□□□□ -1.32
TRM112YNR046W TIF4632P39936 914 aaKnown RBP6.77□□□□□ -1.33
TRM112YNR046W MIF2P35201 549 aa6.76□□□□□ -1.33
TRM112YNR046W DBP1P24784 617 aaKnown RBP6.75□□□□□ -1.33
TRM112YNR046W PBS2P08018 668 aa6.74□□□□□ -1.33
TRM112YNR046W YOR238WQ08634 303 aa6.74□□□□□ -1.33
TRM112YNR046W STS1P38637 319 aa6.73□□□□□ -1.33
TRM112YNR046W DSF2P38213 736 aa6.72□□□□□ -1.33
TRM112YNR046W YFR006WP43590 535 aa6.71□□□□□ -1.34
TRM112YNR046W NSR1P27476 414 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
TRM112YNR046W TGL3P40308 642 aa6.69□□□□□ -1.34
TRM112YNR046W REF2P42073 533 aaPredicted RBP6.69□□□□□ -1.34
TRM112YNR046W EDS1P38073 919 aa6.68□□□□□ -1.34
TRM112YNR046W YAP5P40574 245 aa6.68□□□□□ -1.34
TRM112YNR046W PTC3P34221 468 aaKnown RBP6.66□□□□□ -1.34
TRM112YNR046W YNR021WP53723 404 aaKnown RBP6.65□□□□□ -1.34
TRM112YNR046W MAM3Q12296 706 aa6.65□□□□□ -1.34
TRM112YNR046W DMA2P53924 522 aa6.64□□□□□ -1.35
TRM112YNR046W MAK21Q12176 1025 aaKnown RBP6.64□□□□□ -1.35
TRM112YNR046W PIB1Q06651 286 aa6.6□□□□□ -1.35
TRM112YNR046W COX6P00427 148 aa6.59□□□□□ -1.35
TRM112YNR046W VMA1P17255 1071 aaKnown RBP6.59□□□□□ -1.35
TRM112YNR046W IES2P40154 320 aa6.59□□□□□ -1.35
TRM112YNR046W KIN1P13185 1064 aa6.58□□□□□ -1.36
TRM112YNR046W ATH1P48016 1211 aa6.58□□□□□ -1.36
TRM112YNR046W GRE2Q12068 342 aaKnown RBP6.57□□□□□ -1.36
TRM112YNR046W AIM7Q12156 149 aa6.57□□□□□ -1.36
TRM112YNR046W GUT1P32190 709 aa6.56□□□□□ -1.36
TRM112YNR046W GLC3P32775 704 aa6.55□□□□□ -1.36
TRM112YNR046W HGH1P48362 394 aaKnown RBP6.55□□□□□ -1.36
TRM112YNR046W NUP42P49686 430 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms