RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C YHR054CP38780 354 aa4.38□□□□□ -1.71
CUS1YMR240C VHS2P40463 436 aa4.38□□□□□ -1.71
CUS1YMR240C PEX25Q02969 394 aa4.38□□□□□ -1.71
CUS1YMR240C NUP53Q03790 475 aa4.38□□□□□ -1.71
CUS1YMR240C YDR387CQ04162 555 aa4.38□□□□□ -1.71
CUS1YMR240C RRP7P25368 297 aaPredicted RBP4.37□□□□□ -1.71
CUS1YMR240C TMT1P32643 299 aa4.37□□□□□ -1.71
CUS1YMR240C SWH1P35845 1188 aa4.37□□□□□ -1.71
CUS1YMR240C FRE2P36033 711 aa4.37□□□□□ -1.71
CUS1YMR240C ISC1P40015 477 aaKnown RBP4.37□□□□□ -1.71
CUS1YMR240C EFM4P40516 257 aa4.37□□□□□ -1.71
CUS1YMR240C TRS85P46944 698 aa4.37□□□□□ -1.71
CUS1YMR240C GWT1P47026 490 aa4.37□□□□□ -1.71
CUS1YMR240C PNG1Q02890 363 aa4.37□□□□□ -1.71
CUS1YMR240C ICT1Q12385 394 aa4.37□□□□□ -1.71
CUS1YMR240C LPD1P09624 499 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C RPL1AP0CX43 217 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C RPL1BP0CX44 217 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C MRS3P10566 314 aa4.36□□□□□ -1.71
CUS1YMR240C RPI1P23250 407 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C APE2P32454 952 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C NIP1P32497 812 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C NDC1P32500 655 aa4.36□□□□□ -1.71
CUS1YMR240C PTR2P32901 601 aa4.36□□□□□ -1.71
CUS1YMR240C SOR1P35497 357 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C ZTA1P38230 334 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C HAT2P39984 401 aa4.36□□□□□ -1.71
CUS1YMR240C SAD1P43589 448 aa4.36□□□□□ -1.71
CUS1YMR240C LSC1P53598 329 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C YIF1P53845 314 aaKnown RBP4.36□□□□□ -1.71
CUS1YMR240C OCA2P53949 197 aa4.36□□□□□ -1.71
CUS1YMR240C SOR2Q07786 357 aa4.36□□□□□ -1.71
CUS1YMR240C BUG1Q12191 341 aa4.36□□□□□ -1.71
CUS1YMR240C TY1B-AO13527 1196 aaKnown RBP4.35□□□□□ -1.71
CUS1YMR240C ARO3P14843 370 aaKnown RBP4.35□□□□□ -1.71
CUS1YMR240C MTF1P14908 341 aaKnown RBP4.35□□□□□ -1.71
CUS1YMR240C OPI1P21957 404 aa4.35□□□□□ -1.71
CUS1YMR240C HEL1P36113 551 aa4.35□□□□□ -1.71
CUS1YMR240C ASC1P38011 319 aaKnown RBP4.35□□□□□ -1.71
CUS1YMR240C RRN10P38204 145 aa4.35□□□□□ -1.71
CUS1YMR240C SHO1P40073 367 aa4.35□□□□□ -1.71
CUS1YMR240C YJL070CP40361 888 aa4.35□□□□□ -1.71
CUS1YMR240C PCP1P53259 346 aa4.35□□□□□ -1.71
CUS1YMR240C TAF12Q03761 539 aa4.35□□□□□ -1.71
CUS1YMR240C ERP1Q05359 219 aaKnown RBP4.35□□□□□ -1.71
CUS1YMR240C YLR456WQ06199 204 aa4.35□□□□□ -1.71
CUS1YMR240C GRS2Q06817 618 aa4.35□□□□□ -1.71
CUS1YMR240C CYB2P00175 591 aa4.34□□□□□ -1.71
CUS1YMR240C YAR066WP0CX18 203 aa4.34□□□□□ -1.71
CUS1YMR240C YHR214WP0CX19 203 aa4.34□□□□□ -1.71
CUS1YMR240C YCR100CP25606 316 aa4.34□□□□□ -1.71
CUS1YMR240C YCR022CP25620 114 aa4.34□□□□□ -1.71
CUS1YMR240C SMY1P32364 656 aaKnown RBP4.34□□□□□ -1.71
CUS1YMR240C SPC110P32380 944 aa4.34□□□□□ -1.71
CUS1YMR240C ALG8P40351 577 aa4.34□□□□□ -1.71
CUS1YMR240C PHO86P46956 311 aa4.34□□□□□ -1.71
CUS1YMR240C RTT101P47050 842 aa4.34□□□□□ -1.71
CUS1YMR240C YIP1P53039 248 aa4.34□□□□□ -1.71
CUS1YMR240C ARK1P53974 638 aa4.34□□□□□ -1.71
CUS1YMR240C ODC1Q03028 310 aa4.34□□□□□ -1.71
CUS1YMR240C ADE4P04046 510 aaKnown RBP4.33□□□□□ -1.72
CUS1YMR240C RPL15AP05748 204 aaKnown RBP4.33□□□□□ -1.72
CUS1YMR240C NAT1P12945 854 aaKnown RBP4.33□□□□□ -1.72
CUS1YMR240C PMR1P13586 950 aa4.33□□□□□ -1.72
CUS1YMR240C CRM1P30822 1084 aaKnown RBP4.33□□□□□ -1.72
CUS1YMR240C NDI1P32340 513 aa4.33□□□□□ -1.72
CUS1YMR240C VPH1P32563 840 aaKnown RBP4.33□□□□□ -1.72
CUS1YMR240C YCR041WP37265 110 aa4.33□□□□□ -1.72
CUS1YMR240C OLA1P38219 394 aaKnown RBP4.33□□□□□ -1.72
CUS1YMR240C GCD10P41814 478 aa4.33□□□□□ -1.72
CUS1YMR240C RPN9Q04062 393 aaKnown RBP4.33□□□□□ -1.72
CUS1YMR240C DAP1Q12091 152 aa4.33□□□□□ -1.72
CUS1YMR240C SKS1Q12505 502 aa4.33□□□□□ -1.72
CUS1YMR240C COX3P00420 269 aa4.32□□□□□ -1.72
CUS1YMR240C ATR1P13090 542 aa4.32□□□□□ -1.72
CUS1YMR240C CTR86P25355 563 aa4.32□□□□□ -1.72
CUS1YMR240C DPH2P32461 534 aa4.32□□□□□ -1.72
CUS1YMR240C PCA1P38360 1216 aa4.32□□□□□ -1.72
CUS1YMR240C FAD1P38913 306 aa4.32□□□□□ -1.72
CUS1YMR240C YAL037WP39728 267 aa4.32□□□□□ -1.72
CUS1YMR240C PRP42Q03776 544 aaKnown RBP4.32□□□□□ -1.72
CUS1YMR240C YDR341CQ05506 607 aaKnown RBP4.32□□□□□ -1.72
CUS1YMR240C REX4Q08237 289 aa4.32□□□□□ -1.72
CUS1YMR240C SGT1Q08446 395 aa4.32□□□□□ -1.72
CUS1YMR240C RUP1Q12242 671 aa4.32□□□□□ -1.72
CUS1YMR240C RPL20AP0CX23 172 aaKnown RBP4.31□□□□□ -1.72
CUS1YMR240C RPL20BP0CX24 172 aaPredicted RBP4.31□□□□□ -1.72
CUS1YMR240C GLC7P32598 312 aaKnown RBP4.31□□□□□ -1.72
CUS1YMR240C PMU1P36069 295 aa4.31□□□□□ -1.72
CUS1YMR240C MTC4P38335 694 aaKnown RBP4.31□□□□□ -1.72
CUS1YMR240C LYS1P38998 373 aaRIP-Chip data4.31□□□□□ -1.72not detected
CUS1YMR240C EOS1P53938 366 aa4.31□□□□□ -1.72
CUS1YMR240C AYT1Q12226 474 aa4.31□□□□□ -1.72
CUS1YMR240C RIM1P32445 135 aaKnown RBP4.3□□□□□ -1.72
CUS1YMR240C RRP4P38792 359 aaKnown RBP4.3□□□□□ -1.72
CUS1YMR240C CAJ1P39101 391 aa4.3□□□□□ -1.72
CUS1YMR240C RPR2P40571 144 aa4.3□□□□□ -1.72
CUS1YMR240C YPS6P40583 537 aa4.3□□□□□ -1.72
CUS1YMR240C RRT5P43607 289 aa4.3□□□□□ -1.72
CUS1YMR240C HMS2P47175 358 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms