RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	SGT1	Q08446	395 aa		4.02	□□□□□ -1.77
EBP2	YKL172W	CBS2	P14905	389 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	PDX1	P16451	410 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	RPI1	P23250	407 aa	Known RBP	4.01	□□□□□ -1.77
EBP2	YKL172W	KRE2	P27809	442 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	MRP4	P32902	394 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	YFL067W	P43537	175 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	TRS85	P46944	698 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	YJR011C	P47086	261 aa	Predicted RBP	4.01	□□□□□ -1.77
EBP2	YKL172W	WSC2	P53832	503 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	ARX1	Q03862	593 aa	Known RBP	4.01	□□□□□ -1.77
EBP2	YKL172W	SCW10	Q04951	389 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	YPL199C	Q08954	240 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	VAM3	Q12241	283 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	YCL021W-A	Q96VH3	125 aa		4.01	□□□□□ -1.77
EBP2	YKL172W	SNT1	P25357	1226 aa		4	□□□□□ -1.77
EBP2	YKL172W	RPC53	P25441	422 aa		4	□□□□□ -1.77
EBP2	YKL172W	SIN4	P32259	974 aa		4	□□□□□ -1.77
EBP2	YKL172W	NAT2	P37293	288 aa		4	□□□□□ -1.77
EBP2	YKL172W	RPS0B	P46654	252 aa	Known RBP	4	□□□□□ -1.77
EBP2	YKL172W	YGR250C	P53316	781 aa	Known RBP	4	□□□□□ -1.77
EBP2	YKL172W	BOR1	P53838	576 aa		4	□□□□□ -1.77
EBP2	YKL172W	RRN11	Q04712	507 aa		4	□□□□□ -1.77
EBP2	YKL172W	ROY1	Q04847	553 aa		4	□□□□□ -1.77
EBP2	YKL172W	MED2	Q12124	431 aa		4	□□□□□ -1.77
EBP2	YKL172W	HEM15	P16622	393 aa		3.99	□□□□□ -1.77
EBP2	YKL172W	SPS22	P25380	463 aa		3.99	□□□□□ -1.77
EBP2	YKL172W	ADK2	P26364	225 aa		3.99	□□□□□ -1.77
EBP2	YKL172W	DBF4	P32325	704 aa		3.99	□□□□□ -1.77
EBP2	YKL172W	ART5	P53244	586 aa	Known RBP	3.99	□□□□□ -1.77
EBP2	YKL172W	YIF1	P53845	314 aa	Known RBP	3.99	□□□□□ -1.77
EBP2	YKL172W	REX4	Q08237	289 aa		3.99	□□□□□ -1.77
EBP2	YKL172W	YLL056C	Q12177	298 aa		3.99	□□□□□ -1.77
EBP2	YKL172W	PKH2	Q12236	1081 aa	Known RBP	3.99	□□□□□ -1.77
EBP2	YKL172W	AFI1	Q99222	893 aa		3.99	□□□□□ -1.77
EBP2	YKL172W	ARG4	P04076	463 aa	Predicted RBP	3.98	□□□□□ -1.77
EBP2	YKL172W	SEC63	P14906	663 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	BEM1	P29366	551 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	TFB1	P32776	642 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	MPE1	P35728	441 aa	Known RBP	3.98	□□□□□ -1.77
EBP2	YKL172W	STB6	P36085	766 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	MMS4	P38257	691 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	PCA1	P38360	1216 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	MST28	P39552	234 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	SAS2	P40963	338 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	YGL242C	P53066	181 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	KTR5	P53966	522 aa	Predicted RBP	3.98	□□□□□ -1.77
EBP2	YKL172W	RMT2	Q03305	412 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	ESA1	Q08649	445 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	TIM18	Q08749	192 aa		3.98	□□□□□ -1.77
EBP2	YKL172W	RKM1	Q08961	583 aa	Predicted RBP	3.98	□□□□□ -1.77
EBP2	YKL172W	RHB1	P25378	209 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	TIP1	P27654	210 aa	Predicted RBP	3.97	□□□□□ -1.77
EBP2	YKL172W	HIR2	P32480	875 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	MIX23	P38162	196 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	RFC3	P38629	340 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	LAM5	P43560	674 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	CAK1	P43568	368 aa	Predicted RBP	3.97	□□□□□ -1.77
EBP2	YKL172W	BNI5	P53890	448 aa	Known RBP	3.97	□□□□□ -1.77
EBP2	YKL172W	HOT1	Q03213	719 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	ERB1	Q04660	807 aa	Known RBP	3.97	□□□□□ -1.77
EBP2	YKL172W	TLG2	Q08144	397 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	YLR108C	Q12259	485 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	RRP12	Q12754	1228 aa	Known RBP	3.97	□□□□□ -1.77
EBP2	YKL172W	ISN1	Q99312	450 aa		3.97	□□□□□ -1.77
EBP2	YKL172W	SCEI	P03882	235 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	SAM1	P10659	382 aa	Known RBP	3.96	□□□□□ -1.78
EBP2	YKL172W	SAM2	P19358	384 aa	Known RBP	3.96	□□□□□ -1.78
EBP2	YKL172W	CLB1	P24868	471 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	AVT5	P38176	459 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	LYS1	P38998	373 aa	RIP-Chip data	3.96	□□□□□ -1.78	RIP-Chip
EBP2	YKL172W	YPI1	P43587	155 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	YNR048W	P53740	393 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	YMR181C	Q03231	154 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	TAF12	Q03761	539 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	YDR131C	Q03899	556 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	YMR130W	Q04223	302 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	HEL2	Q05580	639 aa	Known RBP	3.96	□□□□□ -1.78
EBP2	YKL172W	THP3	Q12049	470 aa	Known RBP	3.96	□□□□□ -1.78
EBP2	YKL172W	ISA2	Q12425	185 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	RAD61	Q99359	647 aa		3.96	□□□□□ -1.78
EBP2	YKL172W	HHF1	P02309	103 aa	Known RBP	3.95	□□□□□ -1.78
EBP2	YKL172W	SPT15	P13393	240 aa	Known RBP	3.95	□□□□□ -1.78
EBP2	YKL172W	URA4	P20051	364 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	URA7	P28274	579 aa	Known RBP	3.95	□□□□□ -1.78
EBP2	YKL172W	BRF1	P29056	596 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	SDH3	P33421	198 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	HMS2	P47175	358 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	FRE4	P53746	719 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	MDG1	P53885	366 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	MDM30	Q05930	598 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	YPR022C	Q12139	1133 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	YER078W-A	Q3E7A2	54 aa		3.95	□□□□□ -1.78
EBP2	YKL172W	TEF1	P02994	458 aa	Known RBP	3.94	□□□□□ -1.78
EBP2	YKL172W	SUP35	P05453	685 aa	Known RBP	3.94	□□□□□ -1.78
EBP2	YKL172W	CHS1	P08004	1131 aa		3.94	□□□□□ -1.78
EBP2	YKL172W	LSB5	P25369	354 aa		3.94	□□□□□ -1.78
EBP2	YKL172W	GEX1	P25596	615 aa		3.94	□□□□□ -1.78
EBP2	YKL172W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.94	□□□□□ -1.78	not detected
EBP2	YKL172W	YBL059W	P34224	193 aa		3.94	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 117.2 ms