RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeastyeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EBP2YKL172W DRS1P32892 752 aaKnown RBP14.39□□□□□ -0.11
EBP2YKL172W MTC1P47018 478 aaKnown RBP14.38□□□□□ -0.11
EBP2YKL172W BFR2Q06631 534 aaKnown RBP12.44□□□□□ -0.42
EBP2YKL172W FAP1P53971 965 aa12.3□□□□□ -0.44
EBP2YKL172W DIP2Q12220 943 aaPredicted RBP12.26□□□□□ -0.45
EBP2YKL172W AVT3P36062 692 aa12.07□□□□□ -0.48
EBP2YKL172W ISW2Q08773 1120 aa11.76□□□□□ -0.53
EBP2YKL172W TFA1P36100 482 aa11.68□□□□□ -0.54
EBP2YKL172W RSE1Q04693 1361 aaKnown RBP11.62□□□□□ -0.55
EBP2YKL172W PRY3P47033 881 aa11.58□□□□□ -0.56
EBP2YKL172W PRI1P10363 409 aa11.56□□□□□ -0.56
EBP2YKL172W RPG1P38249 964 aaKnown RBP11.53□□□□□ -0.56
EBP2YKL172W AAD16Q02895 342 aa11.38□□□□□ -0.59
EBP2YKL172W RPL17AP05740 184 aaKnown RBP11.14□□□□□ -0.63
EBP2YKL172W RPL17BP46990 184 aaKnown RBP11.14□□□□□ -0.63
EBP2YKL172W REB1P21538 810 aa11.05□□□□□ -0.64
EBP2YKL172W YCK3P39962 524 aa10.94□□□□□ -0.66
EBP2YKL172W TSR3Q12094 313 aaKnown RBP10.94□□□□□ -0.66
EBP2YKL172W HAA1Q12753 694 aaKnown RBP10.82□□□□□ -0.68
EBP2YKL172W SPT21P35209 758 aa10.72□□□□□ -0.69
EBP2YKL172W MRPL32P25348 183 aa10.59□□□□□ -0.71
EBP2YKL172W RIM101P33400 625 aa10.57□□□□□ -0.72
EBP2YKL172W YKR023WP36119 530 aaKnown RBP10.36□□□□□ -0.75
EBP2YKL172W OXP1P28273 1286 aa10.2□□□□□ -0.78
EBP2YKL172W TFC8Q12308 588 aa10.18□□□□□ -0.78
EBP2YKL172W PTP3P40048 928 aa10.17□□□□□ -0.78
EBP2YKL172W YIL055CP40523 627 aaKnown RBP10.15□□□□□ -0.78
EBP2YKL172W HOP09932 586 aa10.14□□□□□ -0.79
EBP2YKL172W CDC27P38042 758 aa10.14□□□□□ -0.79
EBP2YKL172W SSP1P38871 571 aa10.11□□□□□ -0.79
EBP2YKL172W YAH1Q12184 172 aaKnown RBP10.07□□□□□ -0.8
EBP2YKL172W DCD1P06773 312 aa10.04□□□□□ -0.8
EBP2YKL172W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.02□□□□□ -0.81not detected
EBP2YKL172W RQC2Q12532 1038 aaKnown RBP10□□□□□ -0.81
EBP2YKL172W RSM7P47150 247 aa9.96□□□□□ -0.82
EBP2YKL172W YGL015CP33199 130 aa9.93□□□□□ -0.82
EBP2YKL172W YLR271WQ06152 274 aa9.93□□□□□ -0.82
EBP2YKL172W BCH2P36122 765 aa9.87□□□□□ -0.83
EBP2YKL172W UBP10P53874 792 aaPredicted RBP9.85□□□□□ -0.83
EBP2YKL172W BBC1P47068 1157 aa9.8□□□□□ -0.84
EBP2YKL172W AI2P03876 854 aa9.79□□□□□ -0.84
EBP2YKL172W MGA2P40578 1113 aa9.78□□□□□ -0.84
EBP2YKL172W MAP2P38174 421 aaKnown RBP9.74□□□□□ -0.85
EBP2YKL172W SCY1P53009 804 aa9.74□□□□□ -0.85
EBP2YKL172W EPS1P40557 701 aa9.72□□□□□ -0.85
EBP2YKL172W PSD2P53037 1138 aaKnown RBP9.71□□□□□ -0.86
EBP2YKL172W BDF1P35817 686 aa9.64□□□□□ -0.87
EBP2YKL172W CST9Q06032 482 aa9.61□□□□□ -0.87
EBP2YKL172W SLX5P32828 619 aaKnown RBP9.6□□□□□ -0.87
EBP2YKL172W DMA1P38823 416 aa9.55□□□□□ -0.88
EBP2YKL172W MRM1P25270 412 aa9.48□□□□□ -0.89
EBP2YKL172W TIF4632P39936 914 aaKnown RBP9.47□□□□□ -0.89
EBP2YKL172W RTG3P38165 486 aa9.38□□□□□ -0.91
EBP2YKL172W TGL3P40308 642 aa9.36□□□□□ -0.91
EBP2YKL172W BUD31P25337 157 aaPredicted RBP9.31□□□□□ -0.92
EBP2YKL172W NSR1P27476 414 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92not detected
EBP2YKL172W RAM2P29703 316 aa9.28□□□□□ -0.92
EBP2YKL172W RCR1P38212 213 aa9.28□□□□□ -0.92
EBP2YKL172W VPS29P38759 282 aa9.23□□□□□ -0.93
EBP2YKL172W YMR1P47147 688 aaKnown RBP RIP-Chip data9.23□□□□□ -0.93not detected
EBP2YKL172W MAK11P20484 414 aaKnown RBP9.22□□□□□ -0.93
EBP2YKL172W YAP5P40574 245 aa9.21□□□□□ -0.94
EBP2YKL172W YOR238WQ08634 303 aa9.17□□□□□ -0.94
EBP2YKL172W DBP1P24784 617 aaKnown RBP9.13□□□□□ -0.95
EBP2YKL172W SET1P38827 1080 aaKnown RBP9.11□□□□□ -0.95
EBP2YKL172W SAS10Q12136 610 aaPredicted RBP9.11□□□□□ -0.95
EBP2YKL172W STS1P38637 319 aa9.1□□□□□ -0.95
EBP2YKL172W IFH1P39520 1085 aa9.08□□□□□ -0.96
EBP2YKL172W MST1P07236 462 aa9.06□□□□□ -0.96
EBP2YKL172W YFR006WP43590 535 aa9.06□□□□□ -0.96
EBP2YKL172W COQ8P27697 501 aa9.05□□□□□ -0.96
EBP2YKL172W NOP53Q12080 455 aaKnown RBP9.05□□□□□ -0.96
EBP2YKL172W MIF2P35201 549 aa9.02□□□□□ -0.97
EBP2YKL172W PIB1Q06651 286 aa9.01□□□□□ -0.97
EBP2YKL172W YPR148CQ06523 435 aa8.99□□□□□ -0.97
EBP2YKL172W GTT3P39996 337 aa8.98□□□□□ -0.97
EBP2YKL172W VMA1P17255 1071 aaKnown RBP8.97□□□□□ -0.97
EBP2YKL172W EDS1P38073 919 aa8.94□□□□□ -0.98
EBP2YKL172W CKB1P43639 278 aa8.93□□□□□ -0.98
EBP2YKL172W PTC3P34221 468 aaKnown RBP8.91□□□□□ -0.98
EBP2YKL172W VPS70P47161 811 aa8.91□□□□□ -0.98
EBP2YKL172W SAM3Q08986 587 aa8.9□□□□□ -0.98
EBP2YKL172W UBP9P39967 754 aa8.86□□□□□ -0.99
EBP2YKL172W ABP1P15891 592 aaKnown RBP8.85□□□□□ -0.99
EBP2YKL172W GRE2Q12068 342 aaKnown RBP8.85□□□□□ -0.99
EBP2YKL172W ATH1P48016 1211 aa8.84□□□□□ -0.99
EBP2YKL172W MSB4Q12317 492 aa8.83□□□□□ -1
EBP2YKL172W LEU3P08638 886 aa8.82□□□□□ -1
EBP2YKL172W SIS1P25294 352 aaKnown RBP8.82□□□□□ -1
EBP2YKL172W GUT1P32190 709 aa8.82□□□□□ -1
EBP2YKL172W GYP5Q12344 894 aa8.82□□□□□ -1
EBP2YKL172W YOL036WQ08206 761 aa8.8□□□□□ -1
EBP2YKL172W SPB4P25808 606 aaPredicted RBP8.77□□□□□ -1.01
EBP2YKL172W WSC3Q12215 556 aa8.77□□□□□ -1.01
EBP2YKL172W EAP1P36041 632 aaKnown RBP8.75□□□□□ -1.01
EBP2YKL172W REF2P42073 533 aaPredicted RBP8.75□□□□□ -1.01
EBP2YKL172W SET4P42948 560 aa8.75□□□□□ -1.01
EBP2YKL172W YBL029C-AQ3E756 94 aa8.73□□□□□ -1.01
EBP2YKL172W HTA1P04911 132 aaKnown RBP8.72□□□□□ -1.01
EBP2YKL172W HTA2P04912 132 aa8.72□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms