RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W SPS1P08458 490 aa5.22□□□□□ -1.57
CDC43YGL155W GAL3P13045 520 aa5.22□□□□□ -1.57
CDC43YGL155W CBS2P14905 389 aa5.22□□□□□ -1.57
CDC43YGL155W MTF1P14908 341 aaKnown RBP5.22□□□□□ -1.57
CDC43YGL155W IDI1P15496 288 aa5.22□□□□□ -1.57
CDC43YGL155W MET8P15807 274 aa5.22□□□□□ -1.57
CDC43YGL155W POL30P15873 258 aaKnown RBP5.22□□□□□ -1.57
CDC43YGL155W DAP2P18962 818 aa5.22□□□□□ -1.57
CDC43YGL155W PRI2P20457 528 aa5.22□□□□□ -1.57
CDC43YGL155W DAL81P21657 970 aa5.22□□□□□ -1.57
CDC43YGL155W PRP19P32523 503 aaKnown RBP5.22□□□□□ -1.57
CDC43YGL155W HBS1P32769 611 aaKnown RBP5.22□□□□□ -1.57
CDC43YGL155W YBR139WP38109 508 aa5.22□□□□□ -1.57
CDC43YGL155W PEX18P38855 283 aa5.22□□□□□ -1.57
CDC43YGL155W IPT1P38954 527 aa5.22□□□□□ -1.57
CDC43YGL155W MNN9P39107 395 aaKnown RBP5.22□□□□□ -1.57
CDC43YGL155W SOP4P39543 234 aaPredicted RBP5.22□□□□□ -1.57
CDC43YGL155W ERV46P39727 415 aa5.22□□□□□ -1.57
CDC43YGL155W RPH1P39956 796 aa5.22□□□□□ -1.57
CDC43YGL155W TPA1P40032 644 aaKnown RBP5.22□□□□□ -1.57
CDC43YGL155W DDI1P40087 428 aa5.22□□□□□ -1.57
CDC43YGL155W GYP8P43570 497 aa5.22□□□□□ -1.57
CDC43YGL155W PTR3P43606 678 aa5.22□□□□□ -1.57
CDC43YGL155W AIM14P53109 570 aa5.22□□□□□ -1.57
CDC43YGL155W SPC105P53148 917 aa5.22□□□□□ -1.57
CDC43YGL155W YNL018CP53976 612 aa5.22□□□□□ -1.57
CDC43YGL155W PEX13P80667 386 aa5.22□□□□□ -1.57
CDC43YGL155W RPL34AP87262 121 aaPredicted RBP5.22□□□□□ -1.57
CDC43YGL155W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
CDC43YGL155W FMP30Q02883 468 aa5.22□□□□□ -1.57
CDC43YGL155W HEH2Q03281 663 aa5.22□□□□□ -1.57
CDC43YGL155W YMR206WQ03695 313 aa5.22□□□□□ -1.57
CDC43YGL155W CCE1Q03702 353 aa5.22□□□□□ -1.57
CDC43YGL155W RRP17Q04031 235 aaPredicted RBP5.22□□□□□ -1.57
CDC43YGL155W MUS81Q04149 632 aaPredicted RBP5.22□□□□□ -1.57
CDC43YGL155W NEJ1Q06148 342 aa5.22□□□□□ -1.57
CDC43YGL155W RAD34Q06665 692 aa5.22□□□□□ -1.57
CDC43YGL155W MDM36Q06820 579 aa5.22□□□□□ -1.57
CDC43YGL155W YLR125WQ12138 136 aa5.22□□□□□ -1.57
CDC43YGL155W UPC2Q12151 913 aa5.22□□□□□ -1.57
CDC43YGL155W MNL2Q12205 849 aa5.22□□□□□ -1.57
CDC43YGL155W WTM1Q12363 437 aaKnown RBP5.22□□□□□ -1.57
CDC43YGL155W YDL199CQ12407 687 aa5.22□□□□□ -1.57
CDC43YGL155W YOR338WQ99326 363 aa5.22□□□□□ -1.57
CDC43YGL155W RPP1AP05318 106 aaPredicted RBP5.21□□□□□ -1.58
CDC43YGL155W DST1P07273 309 aa5.21□□□□□ -1.58
CDC43YGL155W APA1P16550 321 aaKnown RBP5.21□□□□□ -1.58
CDC43YGL155W SIR1P21691 654 aa5.21□□□□□ -1.58
CDC43YGL155W SFP1P32432 683 aa5.21□□□□□ -1.58
CDC43YGL155W UIP5P36137 443 aa5.21□□□□□ -1.58
CDC43YGL155W RCK1P38622 512 aa5.21□□□□□ -1.58
CDC43YGL155W UTP18P40362 594 aaPredicted RBP5.21□□□□□ -1.58
CDC43YGL155W BIR1P47134 954 aa5.21□□□□□ -1.58
CDC43YGL155W EFM3P47163 339 aa5.21□□□□□ -1.58
CDC43YGL155W AMA1P50082 593 aa5.21□□□□□ -1.58
CDC43YGL155W IMD3P50095 523 aaKnown RBP5.21□□□□□ -1.58
CDC43YGL155W SUT1P53032 299 aaKnown RBP5.21□□□□□ -1.58
CDC43YGL155W NQM1P53228 333 aaPredicted RBP5.21□□□□□ -1.58
CDC43YGL155W TWF1P53250 332 aa5.21□□□□□ -1.58
CDC43YGL155W DAM1P53267 343 aa5.21□□□□□ -1.58
CDC43YGL155W VPS62P53285 467 aa5.21□□□□□ -1.58
CDC43YGL155W MET31Q03081 177 aa5.21□□□□□ -1.58
CDC43YGL155W RSC9Q03124 581 aa5.21□□□□□ -1.58
CDC43YGL155W VHS1Q03785 461 aa5.21□□□□□ -1.58
CDC43YGL155W CIA1Q05583 330 aa5.21□□□□□ -1.58
CDC43YGL155W HBT1Q07653 1046 aaKnown RBP5.21□□□□□ -1.58
CDC43YGL155W RRT8Q08219 342 aa5.21□□□□□ -1.58
CDC43YGL155W BUD7Q08754 746 aa5.21□□□□□ -1.58
CDC43YGL155W RKM1Q08961 583 aaPredicted RBP5.21□□□□□ -1.58
CDC43YGL155W FLC1Q08967 793 aa5.21□□□□□ -1.58
CDC43YGL155W MLH3Q12083 715 aa5.21□□□□□ -1.58
CDC43YGL155W RRP42Q12277 265 aaPredicted RBP5.21□□□□□ -1.58
CDC43YGL155W SNF8Q12483 233 aa5.21□□□□□ -1.58
CDC43YGL155W DCP1Q12517 231 aaPredicted RBP5.21□□□□□ -1.58
CDC43YGL155W TIM9O74700 87 aa5.2□□□□□ -1.58
CDC43YGL155W FUR4P05316 633 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W RPL6BP05739 176 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W STE3P06783 470 aa5.2□□□□□ -1.58
CDC43YGL155W CMK1P27466 446 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W MRPL9P31334 269 aa5.2□□□□□ -1.58
CDC43YGL155W SPS19P32573 292 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W SDH3P33421 198 aa5.2□□□□□ -1.58
CDC43YGL155W GCS1P35197 352 aa5.2□□□□□ -1.58
CDC43YGL155W LRG1P35688 1017 aa5.2□□□□□ -1.58
CDC43YGL155W RMA1P36001 430 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W COS111P38308 924 aa5.2□□□□□ -1.58
CDC43YGL155W TSL1P38427 1098 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W HSE1P38753 452 aa5.2□□□□□ -1.58
CDC43YGL155W GIC1P38785 314 aa5.2□□□□□ -1.58
CDC43YGL155W YHR078WP38799 552 aa5.2□□□□□ -1.58
CDC43YGL155W EXO1P39875 702 aa5.2□□□□□ -1.58
CDC43YGL155W SPF1P39986 1215 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W YIL161WP40449 235 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W MET12P46151 657 aa5.2□□□□□ -1.58
CDC43YGL155W AIM22P47051 409 aa5.2□□□□□ -1.58
CDC43YGL155W YJR124CP47159 448 aa5.2□□□□□ -1.58
CDC43YGL155W TIS11P47977 285 aa5.2□□□□□ -1.58
CDC43YGL155W PSP1P50896 841 aaKnown RBP5.2□□□□□ -1.58
CDC43YGL155W MDM34P53083 459 aa5.2□□□□□ -1.58
CDC43YGL155W YNL140CP53910 189 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 45 ms