RNA–Protein interactions for RNA: YDR297W

SUR2, Transcript of Sphinganine C4-hydroxylase, yeast

Gene SUR2, Length 1,050 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUR2	YDR297W	FZO1	P38297	855 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	TDP1	P38319	544 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	RCK2	P38623	610 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	YHR033W	P38690	423 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	CCT4	P39078	528 aa	Known RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	PZF1	P39933	429 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	YIL108W	P40483	696 aa	Known RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	TAH11	P47112	604 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	GTO1	P48239	356 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	ASN1	P49089	572 aa	Known RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	RRN9	P53437	365 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	RCF2	P53721	224 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	PRM1	P53835	661 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	VAC7	P53950	1165 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	REG1	Q00816	1014 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	PET117	Q02771	107 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	TAF12	Q03761	539 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	RAD30	Q04049	632 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	BNA7	Q04066	261 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	EMI2	Q04409	500 aa	Known RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	YLR456W	Q06199	204 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	YPR147C	Q06522	304 aa	Known RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	LUC7	Q07508	261 aa	Predicted RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	IES4	Q08561	116 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	ESA1	Q08649	445 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	THP3	Q12049	470 aa	Known RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	MED2	Q12124	431 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	LEU9	Q12166	604 aa	Known RBP	4.64	□□□□□ -1.67
SUR2	YDR297W	COX17	Q12287	69 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	SET6	Q12529	373 aa		4.64	□□□□□ -1.67
SUR2	YDR297W	CDC33	P07260	213 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SUR2	YDR297W	GCD2	P12754	651 aa	Predicted RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	APE1	P14904	514 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	PEX1	P24004	1043 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	PTP1	P25044	335 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	GIT1	P25346	518 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	YUR1	P26725	428 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	RPC19	P28000	142 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	ARP2	P32381	391 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	YBL010C	P32788	280 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	RAD5	P32849	1169 aa	Predicted RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	MNN2	P38069	597 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	HMT1	P38074	348 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	CDS1	P38221	457 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	TAE1	P38340	232 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	FRT2	P39734	528 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	SOK1	P40317	901 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	ATM1	P40416	690 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	YIL001W	P40560	513 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	SSY5	P47002	699 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	YGR127W	P53275	312 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	OKP1	P53298	406 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	RPN9	Q04062	393 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	BUD22	Q04347	519 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	PEX12	Q04370	399 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	ECM22	Q05958	814 aa	Predicted RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	HBT1	Q07653	1046 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	NOP12	Q08208	459 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	YPL272C	Q08984	517 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	AIM41	Q12032	185 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	RTK1	Q12100	620 aa	Predicted RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	HAL9	Q12180	1030 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SUR2	YDR297W	IES3	Q12345	250 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	TRM11	Q12463	433 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	RRP12	Q12754	1228 aa	Known RBP	4.63	□□□□□ -1.67
SUR2	YDR297W	RIF1	P29539	1916 aa		4.63	□□□□□ -1.67
SUR2	YDR297W	RPL6B	P05739	176 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	CHS1	P08004	1131 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	ERG20	P08524	352 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	RPL35A	P0CX84	120 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	RPL35B	P0CX85	120 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	ERG11	P10614	530 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	POL30	P15873	258 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	ERS1	P17261	260 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SUR2	YDR297W	CPR2	P23285	205 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	KIN82	P25341	720 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	RVS161	P25343	265 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	RHB1	P25378	209 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	SEC1	P30619	724 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	ATP7	P30902	174 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	RPD3	P32561	433 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	GCS1	P35197	352 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	SRP102	P36057	244 aa	Predicted RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	HEL1	P36113	551 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	MAL32	P38158	584 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	MRX3	P38172	270 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	FES1	P38260	290 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	VID24	P38263	362 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	HIS2	P38635	335 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	RRP3	P38712	501 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	FHL1	P39521	936 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	FCY21	P40039	528 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	ICE2	P40499	491 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	QRI1	P43123	477 aa	Known RBP	4.62	□□□□□ -1.67
SUR2	YDR297W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.62	□□□□□ -1.67	not detected
SUR2	YDR297W	RPC17	P47076	161 aa		4.62	□□□□□ -1.67
SUR2	YDR297W	AAD10	P47182	288 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms