RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeast

Gene RXT3, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RXT3	YDL076C	RKM3	P38222	552 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	IFA38	P38286	347 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	YBP1	P38315	674 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	CAJ1	P39101	391 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	LRO1	P40345	661 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	ALG8	P40351	577 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	SSU1	P41930	458 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	BRO1	P48582	844 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	IMA1	P53051	589 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	COG1	P53079	417 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	YGR054W	P53235	642 aa	Known RBP	4.28	□□□□□ -1.72
RXT3	YDL076C	RNT1	Q02555	471 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	PET117	Q02771	107 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	SOV1	Q04748	898 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	BSC6	Q08280	497 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	YDR056C	Q12025	205 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	TRM13	Q12383	476 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	LAG2	Q92325	660 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	YOL087C	Q99247	1116 aa		4.28	□□□□□ -1.72
RXT3	YDL076C	RIP1	P08067	215 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	RSR1	P13856	272 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	RRP43	P25359	394 aa	Predicted RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	HRR25	P29295	494 aa	Known RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	ARP2	P32381	391 aa	Known RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	DHR2	P36009	735 aa	Predicted RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	YPT52	P36018	234 aa	Known RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	CTP1	P38152	299 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	MRP21	P38175	177 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	LDB7	P38210	180 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	YSW1	P38280	609 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	RCK2	P38623	610 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	SMF2	P38778	549 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	LCP5	P40079	357 aa	Predicted RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	IDS2	P46958	469 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	RPC17	P47076	161 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	YAP1802	P53309	568 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	YGR250C	P53316	781 aa	Known RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	YPR003C	P53394	754 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	ALF1	P53904	254 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	RHO3	Q00245	231 aa	Known RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	SSL2	Q00578	843 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	NUP100	Q02629	959 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	HOF1	Q05080	669 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	YLR030W	Q07967	263 aa		4.27	□□□□□ -1.73
RXT3	YDL076C	SMF3	Q12078	473 aa	Predicted RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	RRP12	Q12754	1228 aa	Known RBP	4.27	□□□□□ -1.73
RXT3	YDL076C	UBR1	P19812	1950 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	SIR3	P06701	978 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	HSC82	P15108	705 aa	Known RBP	4.26	□□□□□ -1.73
RXT3	YDL076C	GUK1	P15454	187 aa	Known RBP	4.26	□□□□□ -1.73
RXT3	YDL076C	CKI1	P20485	582 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	BUD14	P27637	709 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	HXT1	P32465	570 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	GDA1	P32621	518 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	SET3	P36124	751 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	POP4	P38336	279 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	TCD1	P38756	429 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	YHR182W	P38870	785 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	AXL2	P38928	823 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	LYS1	P38998	373 aa	RIP-Chip data	4.26	□□□□□ -1.73	not detected
RXT3	YDL076C	YMR134W	P40207	237 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	DPH1	P40487	425 aa	Known RBP	4.26	□□□□□ -1.73
RXT3	YDL076C	TES1	P41903	349 aa	Known RBP	4.26	□□□□□ -1.73
RXT3	YDL076C	ALK1	P43633	760 aa	Known RBP	4.26	□□□□□ -1.73
RXT3	YDL076C	BNA1	P47096	177 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	PHO23	P50947	330 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	TEL2	P53038	688 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	BTN2	P53286	410 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	ARE2	P53629	642 aa	Known RBP	4.26	□□□□□ -1.73
RXT3	YDL076C	OSH6	Q02201	448 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	YML122C	Q03207	126 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	ARP9	Q05123	467 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	STP3	Q05937	343 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	IZH3	Q07959	543 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	USV1	Q12132	391 aa		4.26	□□□□□ -1.73
RXT3	YDL076C	HSH49	Q99181	213 aa	Predicted RBP	4.26	□□□□□ -1.73
RXT3	YDL076C	IPP1	P00817	287 aa	Known RBP	4.25	□□□□□ -1.73
RXT3	YDL076C	BCY1	P07278	416 aa	Known RBP	4.25	□□□□□ -1.73
RXT3	YDL076C	ALG7	P07286	448 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	PET122	P10355	254 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	ERG11	P10614	530 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	VPS34	P22543	875 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	YCL068C	P25593	260 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	CTS1	P29029	562 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	MSS1	P32559	526 aa	Predicted RBP	4.25	□□□□□ -1.73
RXT3	YDL076C	CYM1	P32898	989 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	YKL100C	P34248	587 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	MRPL37	P36532	105 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	END3	P39013	349 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	SCC4	P40090	624 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	YJR030C	P47101	745 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	FHN1	P53279	174 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	ESF2	P53743	316 aa	Known RBP	4.25	□□□□□ -1.73
RXT3	YDL076C	YPL108W	Q02872	168 aa	Predicted RBP	4.25	□□□□□ -1.73
RXT3	YDL076C	YMR114C	Q04471	368 aa	Known RBP	4.25	□□□□□ -1.73
RXT3	YDL076C	ARR3	Q06598	404 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	YDL086W	Q07505	273 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	MLH3	Q12083	715 aa		4.25	□□□□□ -1.73
RXT3	YDL076C	CDC24	P11433	854 aa	Predicted RBP	4.24	□□□□□ -1.73
RXT3	YDL076C	SPO16	P17122	198 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms