RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 APE4P38821 490 aa7.87□□□□□ -1.15
NME1NME1 GWT1P47026 490 aa7.87□□□□□ -1.15
NME1NME1 ECM27P47144 725 aa7.87□□□□□ -1.15
NME1NME1 RPM2Q02773 1202 aa7.87□□□□□ -1.15
NME1NME1 UAF30Q08747 228 aa7.87□□□□□ -1.15
NME1NME1 RPN5Q12250 445 aaKnown RBP7.87□□□□□ -1.15
NME1NME1 TY1B-AO13527 1196 aaKnown RBP7.86□□□□□ -1.15
NME1NME1 HIS4P00815 799 aaKnown RBP7.86□□□□□ -1.15
NME1NME1 SCEIP03882 235 aa7.86□□□□□ -1.15
NME1NME1 MTF1P14908 341 aaKnown RBP7.86□□□□□ -1.15
NME1NME1 NDC1P32500 655 aa7.86□□□□□ -1.15
NME1NME1 ECM25P32525 599 aa7.86□□□□□ -1.15
NME1NME1 RXT2P38255 430 aa7.86□□□□□ -1.15
NME1NME1 PCP1P53259 346 aa7.86□□□□□ -1.15
NME1NME1 OCA2P53949 197 aa7.86□□□□□ -1.15
NME1NME1 PNG1Q02890 363 aa7.86□□□□□ -1.15
NME1NME1 GRS2Q06817 618 aa7.86□□□□□ -1.15
NME1NME1 YAR066WP0CX18 203 aa7.85□□□□□ -1.15
NME1NME1 YHR214WP0CX19 203 aa7.85□□□□□ -1.15
NME1NME1 EFM4P40516 257 aa7.85□□□□□ -1.15
NME1NME1 TOM22P49334 152 aa7.85□□□□□ -1.15
NME1NME1 PEX25Q02969 394 aa7.85□□□□□ -1.15
NME1NME1 LPD1P09624 499 aaKnown RBP7.84□□□□□ -1.15
NME1NME1 SEC1P30619 724 aaKnown RBP7.84□□□□□ -1.15
NME1NME1 SHO1P40073 367 aa7.84□□□□□ -1.15
NME1NME1 TRS85P46944 698 aa7.84□□□□□ -1.15
NME1NME1 SOR1P35497 357 aaKnown RBP7.83□□□□□ -1.16
NME1NME1 VHS2P40463 436 aa7.83□□□□□ -1.16
NME1NME1 SOR2Q07786 357 aa7.83□□□□□ -1.16
NME1NME1 CYB2P00175 591 aa7.82□□□□□ -1.16
NME1NME1 PUP2P32379 260 aa7.82□□□□□ -1.16
NME1NME1 SWH1P35845 1188 aa7.82□□□□□ -1.16
NME1NME1 YCR041WP37265 110 aa7.82□□□□□ -1.16
NME1NME1 RRN10P38204 145 aa7.82□□□□□ -1.16
NME1NME1 ZTA1P38230 334 aaKnown RBP7.82□□□□□ -1.16
NME1NME1 YJL070CP40361 888 aa7.82□□□□□ -1.16
NME1NME1 RTT101P47050 842 aa7.82□□□□□ -1.16
NME1NME1 YIP1P53039 248 aa7.82□□□□□ -1.16
NME1NME1 HCR1Q05775 265 aaKnown RBP7.82□□□□□ -1.16
NME1NME1 MRS3P10566 314 aa7.81□□□□□ -1.16
NME1NME1 OPI1P21957 404 aa7.81□□□□□ -1.16
NME1NME1 YCR100CP25606 316 aa7.81□□□□□ -1.16
NME1NME1 ALG8P40351 577 aa7.81□□□□□ -1.16
NME1NME1 YAP7Q08182 245 aa7.81□□□□□ -1.16
NME1NME1 REX4Q08237 289 aa7.81□□□□□ -1.16
NME1NME1 DAP1Q12091 152 aa7.81□□□□□ -1.16
NME1NME1 RRP7P25368 297 aaPredicted RBP7.8□□□□□ -1.16
NME1NME1 CRM1P30822 1084 aaKnown RBP7.8□□□□□ -1.16
NME1NME1 HAT2P39984 401 aa7.8□□□□□ -1.16
NME1NME1 YLR456WQ06199 204 aa7.8□□□□□ -1.16
NME1NME1 BUG1Q12191 341 aa7.8□□□□□ -1.16
NME1NME1 YCR022CP25620 114 aa7.79□□□□□ -1.16
NME1NME1 NDI1P32340 513 aa7.79□□□□□ -1.16
NME1NME1 SPC110P32380 944 aa7.79□□□□□ -1.16
NME1NME1 VPH1P32563 840 aaKnown RBP7.79□□□□□ -1.16
NME1NME1 FAD1P38913 306 aa7.79□□□□□ -1.16
NME1NME1 PHO86P46956 311 aa7.79□□□□□ -1.16
NME1NME1 ODC1Q03028 310 aa7.79□□□□□ -1.16
NME1NME1 RPL1AP0CX43 217 aaKnown RBP7.78□□□□□ -1.16
NME1NME1 RPL1BP0CX44 217 aaKnown RBP7.78□□□□□ -1.16
NME1NME1 PMR1P13586 950 aa7.78□□□□□ -1.16
NME1NME1 ASC1P38011 319 aaKnown RBP7.78□□□□□ -1.16
NME1NME1 MTC4P38335 694 aaKnown RBP7.78□□□□□ -1.16
NME1NME1 RPL20AP0CX23 172 aaKnown RBP7.77□□□□□ -1.17
NME1NME1 RPL20BP0CX24 172 aaPredicted RBP7.77□□□□□ -1.17
NME1NME1 SMY1P32364 656 aaKnown RBP7.77□□□□□ -1.17
NME1NME1 HEL1P36113 551 aa7.77□□□□□ -1.17
NME1NME1 TAF12Q03761 539 aa7.77□□□□□ -1.17
NME1NME1 ERP1Q05359 219 aaKnown RBP7.77□□□□□ -1.17
NME1NME1 SPT7P35177 1332 aa7.77□□□□□ -1.17
NME1NME1 ADE4P04046 510 aaKnown RBP7.76□□□□□ -1.17
NME1NME1 RPL15AP05748 204 aaKnown RBP7.76□□□□□ -1.17
NME1NME1 NAT1P12945 854 aaKnown RBP7.76□□□□□ -1.17
NME1NME1 ARO3P14843 370 aaKnown RBP7.76□□□□□ -1.17
NME1NME1 DPH2P32461 534 aa7.76□□□□□ -1.17
NME1NME1 PMU1P36069 295 aa7.76□□□□□ -1.17
NME1NME1 HMS2P47175 358 aa7.76□□□□□ -1.17
NME1NME1 YLL056CQ12177 298 aa7.76□□□□□ -1.17
NME1NME1 SET6Q12529 373 aa7.76□□□□□ -1.17
NME1NME1 PDE2P06776 526 aa7.75□□□□□ -1.17
NME1NME1 ATR1P13090 542 aa7.75□□□□□ -1.17
NME1NME1 RIM1P32445 135 aaKnown RBP7.75□□□□□ -1.17
NME1NME1 OLA1P38219 394 aaKnown RBP7.75□□□□□ -1.17
NME1NME1 RRP4P38792 359 aaKnown RBP7.75□□□□□ -1.17
NME1NME1 LYS1P38998 373 aaRIP-Chip data7.75□□□□□ -1.17not detected
NME1NME1 GCD10P41814 478 aa7.75□□□□□ -1.17
NME1NME1 AVT4P50944 713 aa7.75□□□□□ -1.17
NME1NME1 POP6P53218 158 aa7.75□□□□□ -1.17
NME1NME1 ARK1P53974 638 aa7.75□□□□□ -1.17
NME1NME1 GIP3Q03016 1276 aa7.75□□□□□ -1.17
NME1NME1 SGT1Q08446 395 aa7.75□□□□□ -1.17
NME1NME1 MUM3Q08750 479 aa7.75□□□□□ -1.17
NME1NME1 GLC7P32598 312 aaKnown RBP7.74□□□□□ -1.17
NME1NME1 AYT1Q12226 474 aa7.74□□□□□ -1.17
NME1NME1 RTT107P38850 1070 aa7.73□□□□□ -1.17
NME1NME1 RPH1P39956 796 aa7.73□□□□□ -1.17
NME1NME1 RPR2P40571 144 aa7.73□□□□□ -1.17
NME1NME1 SSN8P47821 323 aa7.73□□□□□ -1.17
NME1NME1 RHO5P53879 331 aaKnown RBP7.73□□□□□ -1.17
NME1NME1 CRZ1P53968 678 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms