RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	SKO1	Q02100	647 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	RRP45	Q05636	305 aa	Known RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	DIC1	Q06143	298 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	SSK1	Q07084	712 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	COS7	Q07788	383 aa		3.18	□□□□□ -1.9
TSR4	YOL022C	SPE3	Q12074	293 aa	Known RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	BRR1	Q99177	341 aa	Predicted RBP	3.18	□□□□□ -1.9
TSR4	YOL022C	HIP1	P06775	603 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	TYR1	P20049	452 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	ATP11	P32453	318 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	VPH1	P32563	840 aa	Known RBP	3.17	□□□□□ -1.9
TSR4	YOL022C	PHD1	P36093	366 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	SLM4	P38247	162 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	KRE9	P39005	276 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	SEC28	P40509	296 aa	Known RBP	3.17	□□□□□ -1.9
TSR4	YOL022C	DIM1	P41819	318 aa	Known RBP	3.17	□□□□□ -1.9
TSR4	YOL022C	YJL055W	P47044	245 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	OCA1	P50946	238 aa	Predicted RBP	3.17	□□□□□ -1.9
TSR4	YOL022C	YGR111W	P53265	400 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	ACL4	Q03771	387 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	MMR1	Q06324	491 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	CTF3	Q12748	733 aa		3.17	□□□□□ -1.9
TSR4	YOL022C	GPH1	P06738	902 aa	Known RBP	3.16	□□□□□ -1.9
TSR4	YOL022C	RIP1	P08067	215 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	PRP16	P15938	1071 aa	Predicted RBP	3.16	□□□□□ -1.9
TSR4	YOL022C	ATP10	P18496	279 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	GEX1	P25596	615 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	MCM4	P30665	933 aa	Known RBP	3.16	□□□□□ -1.9
TSR4	YOL022C	NIP100	P33420	868 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	YOX1	P34161	385 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	ARA1	P38115	344 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	SER3	P40054	469 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	EFM4	P40516	257 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	SYG1	P40528	902 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	ALT2	P52892	507 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	RPT4	P53549	437 aa	Known RBP	3.16	□□□□□ -1.9
TSR4	YOL022C	PEX25	Q02969	394 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	HOT1	Q03213	719 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	MSS11	Q03825	758 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	HEL2	Q05580	639 aa	Known RBP	3.16	□□□□□ -1.9
TSR4	YOL022C	HCR1	Q05775	265 aa	Known RBP	3.16	□□□□□ -1.9
TSR4	YOL022C	UAF30	Q08747	228 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	VPS54	Q12071	889 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	VAM3	Q12241	283 aa		3.16	□□□□□ -1.9
TSR4	YOL022C	RPN5	Q12250	445 aa	Known RBP	3.16	□□□□□ -1.9
TSR4	YOL022C	MES1	P00958	751 aa	Known RBP	3.15	□□□□□ -1.91
TSR4	YOL022C	URA4	P20051	364 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	PUP2	P32379	260 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	HIR2	P32480	875 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	UTR4	P32626	227 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	LTV1	P34078	463 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	TFG2	P41896	400 aa	Predicted RBP	3.15	□□□□□ -1.91
TSR4	YOL022C	ECM27	P47144	725 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	RMD9	P53140	646 aa	Known RBP	3.15	□□□□□ -1.91
TSR4	YOL022C	YGR016W	P53209	190 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	YMR130W	Q04223	302 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	PHO92	Q06390	306 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
TSR4	YOL022C	DCI1	Q08558	271 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	ARP6	Q12509	438 aa		3.15	□□□□□ -1.91
TSR4	YOL022C	LPD1	P09624	499 aa	Known RBP	3.14	□□□□□ -1.91
TSR4	YOL022C	SEC63	P14906	663 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	SRV2	P17555	526 aa	Known RBP	3.14	□□□□□ -1.91
TSR4	YOL022C	GLK1	P17709	500 aa	Known RBP	3.14	□□□□□ -1.91
TSR4	YOL022C	SPO7	P18410	259 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	CLN1	P20437	546 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	FUN19	P28003	413 aa	Predicted RBP	3.14	□□□□□ -1.91
TSR4	YOL022C	ACH1	P32316	526 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	HEL1	P36113	551 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	VHC1	P38329	1120 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	YHR054C	P38780	354 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	CAJ1	P39101	391 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	TDA7	P53882	636 aa	Predicted RBP	3.14	□□□□□ -1.91
TSR4	YOL022C	SAM50	P53969	484 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	RPM2	Q02773	1202 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	RBA50	Q04418	439 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	GLO2	Q05584	274 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	MDM30	Q05930	598 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	TLG2	Q08144	397 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	THI20	Q08224	551 aa		3.14	□□□□□ -1.91
TSR4	YOL022C	KEL3	Q08979	651 aa	Predicted RBP	3.14	□□□□□ -1.91
TSR4	YOL022C	CFT2	Q12102	859 aa	Predicted RBP	3.14	□□□□□ -1.91
TSR4	YOL022C	RPL1A	P0CX43	217 aa	Known RBP	3.13	□□□□□ -1.91
TSR4	YOL022C	RPL1B	P0CX44	217 aa	Known RBP	3.13	□□□□□ -1.91
TSR4	YOL022C	KRE2	P27809	442 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	BRF1	P29056	596 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	BEM1	P29366	551 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	SIN4	P32259	974 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	PRO3	P32263	286 aa	Known RBP	3.13	□□□□□ -1.91
TSR4	YOL022C	PRP21	P32524	280 aa	Predicted RBP	3.13	□□□□□ -1.91
TSR4	YOL022C	GYP6	P32806	458 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	RFC3	P38629	340 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	RRP3	P38712	501 aa	Known RBP	3.13	□□□□□ -1.91
TSR4	YOL022C	CCT2	P39076	527 aa	Known RBP	3.13	□□□□□ -1.91
TSR4	YOL022C	POP1	P41812	875 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
TSR4	YOL022C	RPS0B	P46654	252 aa	Known RBP	3.13	□□□□□ -1.91
TSR4	YOL022C	YJL132W	P47014	750 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	TOM22	P49334	152 aa		3.13	□□□□□ -1.91
TSR4	YOL022C	SLD5	Q03406	294 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms