RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W TUL1P36096 758 aa3.27□□□□□ -1.89
UBP8YMR223W YNG2P38806 282 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W SEC24P40482 926 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W RPN14P53196 417 aa3.27□□□□□ -1.89
UBP8YMR223W ERG26P53199 349 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W MSO1P53604 210 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W SPH1Q06160 661 aa3.27□□□□□ -1.89
UBP8YMR223W MMR1Q06324 491 aa3.27□□□□□ -1.89
UBP8YMR223W HNT3Q08702 217 aa3.27□□□□□ -1.89
UBP8YMR223W YRM1Q12340 786 aa3.27□□□□□ -1.89
UBP8YMR223W SKS1Q12505 502 aa3.27□□□□□ -1.89
UBP8YMR223W CAR1P00812 333 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W RPL19AP0CX82 189 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W RPL19BP0CX83 189 aaPredicted RBP3.27□□□□□ -1.89
UBP8YMR223W SMY1P32364 656 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W SSE1P32589 693 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W SRO77P38163 1010 aa3.27□□□□□ -1.89
UBP8YMR223W PEX18P38855 283 aa3.27□□□□□ -1.89
UBP8YMR223W RPS10BP46784 105 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W SDT1P53078 280 aa3.27□□□□□ -1.89
UBP8YMR223W YGL039WP53183 348 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W REG1Q00816 1014 aa3.27□□□□□ -1.89
UBP8YMR223W MUB1Q03162 620 aa3.27□□□□□ -1.89
UBP8YMR223W SPE3Q12074 293 aaKnown RBP3.27□□□□□ -1.89
UBP8YMR223W GPM3Q12326 303 aa3.27□□□□□ -1.89
UBP8YMR223W GRX6Q12438 231 aa3.27□□□□□ -1.89
UBP8YMR223W AMD1P15274 810 aaKnown RBP3.26□□□□□ -1.89
UBP8YMR223W DAP2P18962 818 aa3.26□□□□□ -1.89
UBP8YMR223W RPB4P20433 221 aaPredicted RBP3.26□□□□□ -1.89
UBP8YMR223W GRR1P24814 1151 aa3.26□□□□□ -1.89
UBP8YMR223W SPB1P25582 841 aaPredicted RBP3.26□□□□□ -1.89
UBP8YMR223W ERV1P27882 189 aa3.26□□□□□ -1.89
UBP8YMR223W HEL1P36113 551 aa3.26□□□□□ -1.89
UBP8YMR223W APE3P37302 537 aaKnown RBP3.26□□□□□ -1.89
UBP8YMR223W PEX32P38292 413 aa3.26□□□□□ -1.89
UBP8YMR223W MTC6P38849 526 aa3.26□□□□□ -1.89
UBP8YMR223W PTH1P38876 190 aaKnown RBP3.26□□□□□ -1.89
UBP8YMR223W SIP4P46954 829 aa3.26□□□□□ -1.89
UBP8YMR223W SHE4P51534 789 aa3.26□□□□□ -1.89
UBP8YMR223W EOS1P53938 366 aa3.26□□□□□ -1.89
UBP8YMR223W YSA1Q01976 231 aa3.26□□□□□ -1.89
UBP8YMR223W NGL3Q03210 505 aa3.26□□□□□ -1.89
UBP8YMR223W ABZ2Q03266 374 aa3.26□□□□□ -1.89
UBP8YMR223W DON1Q05610 365 aa3.26□□□□□ -1.89
UBP8YMR223W SKG3Q06315 1026 aa3.26□□□□□ -1.89
UBP8YMR223W MDM36Q06820 579 aa3.26□□□□□ -1.89
UBP8YMR223W NOP6Q07623 225 aaKnown RBP3.26□□□□□ -1.89
UBP8YMR223W RRT8Q08219 342 aa3.26□□□□□ -1.89
UBP8YMR223W NBP2Q12163 236 aa3.26□□□□□ -1.89
UBP8YMR223W AVL9Q12500 764 aa3.26□□□□□ -1.89
UBP8YMR223W RRP12Q12754 1228 aaKnown RBP3.26□□□□□ -1.89
UBP8YMR223W ISN1Q99312 450 aa3.26□□□□□ -1.89
UBP8YMR223W CLB1P24868 471 aa3.25□□□□□ -1.89
UBP8YMR223W SPS22P25380 463 aa3.25□□□□□ -1.89
UBP8YMR223W URA7P28274 579 aaKnown RBP3.25□□□□□ -1.89
UBP8YMR223W PDB1P32473 366 aaKnown RBP3.25□□□□□ -1.89
UBP8YMR223W MRE11P32829 692 aa3.25□□□□□ -1.89
UBP8YMR223W RPT5P33297 434 aaKnown RBP3.25□□□□□ -1.89
UBP8YMR223W BUD2P33314 1104 aa3.25□□□□□ -1.89
UBP8YMR223W YBL028CP38202 106 aa3.25□□□□□ -1.89
UBP8YMR223W VPS45P38932 577 aa3.25□□□□□ -1.89
UBP8YMR223W SMC2P38989 1170 aaKnown RBP3.25□□□□□ -1.89
UBP8YMR223W ELO1P39540 310 aa3.25□□□□□ -1.89
UBP8YMR223W YEL057CP39983 233 aa3.25□□□□□ -1.89
UBP8YMR223W ALD5P40047 520 aaKnown RBP3.25□□□□□ -1.89
UBP8YMR223W AIM20P40451 204 aa3.25□□□□□ -1.89
UBP8YMR223W TCB2P48231 1178 aa3.25□□□□□ -1.89
UBP8YMR223W BSC5P53755 489 aa3.25□□□□□ -1.89
UBP8YMR223W YPL014WQ02606 381 aa3.25□□□□□ -1.89
UBP8YMR223W RCO1Q04779 684 aa3.25□□□□□ -1.89
UBP8YMR223W RPS10AQ08745 105 aaPredicted RBP3.25□□□□□ -1.89
UBP8YMR223W LEU9Q12166 604 aaKnown RBP3.25□□□□□ -1.89
UBP8YMR223W TY3A-GQ12173 290 aa3.25□□□□□ -1.89
UBP8YMR223W YDL009CQ12210 107 aa3.25□□□□□ -1.89
UBP8YMR223W TY3A-IQ99219 290 aa3.25□□□□□ -1.89
UBP8YMR223W YLR302CO13544 120 aa3.24□□□□□ -1.89
UBP8YMR223W SUP35P05453 685 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W RPB2P08518 1224 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W SPT15P13393 240 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W YCK1P23291 538 aa3.24□□□□□ -1.89
UBP8YMR223W LSB5P25369 354 aa3.24□□□□□ -1.89
UBP8YMR223W ASF2P32448 525 aaPredicted RBP3.24□□□□□ -1.89
UBP8YMR223W KRE6P32486 720 aa3.24□□□□□ -1.89
UBP8YMR223W DOA4P32571 926 aa3.24□□□□□ -1.89
UBP8YMR223W YUH1P35127 236 aa3.24□□□□□ -1.89
UBP8YMR223W YKT6P36015 200 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W OSH3P38713 996 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W VPS52P39904 641 aa3.24□□□□□ -1.89
UBP8YMR223W AIM10P39965 576 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W BUR6P40096 142 aa3.24□□□□□ -1.89
UBP8YMR223W ARC1P46672 376 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W ALT2P52892 507 aa3.24□□□□□ -1.89
UBP8YMR223W SMM1P53720 384 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W INP2Q03824 705 aa3.24□□□□□ -1.89
UBP8YMR223W ECM18Q04623 453 aa3.24□□□□□ -1.89
UBP8YMR223W MRD1Q06106 887 aaKnown RBP3.24□□□□□ -1.89
UBP8YMR223W SYO1Q07395 620 aa3.24□□□□□ -1.89
UBP8YMR223W SKM1Q12469 655 aa3.24□□□□□ -1.89
UBP8YMR223W YBR126W-AQ8TGU7 68 aa3.24□□□□□ -1.89
UBP8YMR223W SEC53P07283 254 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms