RNA–Protein interactions for RNA: YDR104C

SPO71, Transcript of Meiosis-specific protein required for spore wall formation, yeast

Gene SPO71, Length 3,738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO71	YDR104C	YIR035C	P40579	254 aa		3	□□□□□ -1.93
SPO71	YDR104C	SIP4	P46954	829 aa		3	□□□□□ -1.93
SPO71	YDR104C	PUS4	P48567	403 aa	Known RBP	3	□□□□□ -1.93
SPO71	YDR104C	CUE3	P53137	624 aa	Known RBP	3	□□□□□ -1.93
SPO71	YDR104C	ERV14	P53173	138 aa		3	□□□□□ -1.93
SPO71	YDR104C	ATF2	P53296	535 aa		3	□□□□□ -1.93
SPO71	YDR104C	ASI2	P53895	289 aa		3	□□□□□ -1.93
SPO71	YDR104C	OCA2	P53949	197 aa		3	□□□□□ -1.93
SPO71	YDR104C	SLD5	Q03406	294 aa		3	□□□□□ -1.93
SPO71	YDR104C	THI7	Q05998	598 aa		3	□□□□□ -1.93
SPO71	YDR104C	CDA1	Q06702	301 aa		3	□□□□□ -1.93
SPO71	YDR104C	MFG1	Q07684	458 aa		3	□□□□□ -1.93
SPO71	YDR104C	RTT109	Q07794	436 aa		3	□□□□□ -1.93
SPO71	YDR104C	RRP40	Q08285	240 aa	Known RBP	3	□□□□□ -1.93
SPO71	YDR104C	NSL1	Q12143	216 aa		3	□□□□□ -1.93
SPO71	YDR104C	WIP1	Q2V2P8	89 aa		3	□□□□□ -1.93
SPO71	YDR104C	YOR111W	Q99210	232 aa		3	□□□□□ -1.93
SPO71	YDR104C	COB	P00163	385 aa		3	□□□□□ -1.93
SPO71	YDR104C	CDC28	P00546	298 aa	Known RBP	3	□□□□□ -1.93
SPO71	YDR104C	COS2	P0CX12	379 aa		3	□□□□□ -1.93
SPO71	YDR104C	COS3	P0CX13	379 aa		3	□□□□□ -1.93
SPO71	YDR104C	CAF20	P12962	161 aa	Known RBP	3	□□□□□ -1.93
SPO71	YDR104C	AMS1	P22855	1083 aa		3	□□□□□ -1.93
SPO71	YDR104C	SHP1	P34223	423 aa		3	□□□□□ -1.93
SPO71	YDR104C	SHM1	P37292	490 aa	Predicted RBP	3	□□□□□ -1.93
SPO71	YDR104C	SHG1	P38337	142 aa		3	□□□□□ -1.93
SPO71	YDR104C	KHA1	P40309	873 aa		3	□□□□□ -1.93
SPO71	YDR104C	YNL320W	P42840	284 aa		3	□□□□□ -1.93
SPO71	YDR104C	LSB6	P42951	607 aa		3	□□□□□ -1.93
SPO71	YDR104C	SNG1	P46950	547 aa		3	□□□□□ -1.93
SPO71	YDR104C	PPT1	P53043	513 aa		3	□□□□□ -1.93
SPO71	YDR104C	SWC4	P53201	476 aa		3	□□□□□ -1.93
SPO71	YDR104C	TGL2	P54857	326 aa		3	□□□□□ -1.93
SPO71	YDR104C	MTG1	Q03151	367 aa	Predicted RBP	3	□□□□□ -1.93
SPO71	YDR104C	ECM18	Q04623	453 aa		3	□□□□□ -1.93
SPO71	YDR104C	APC9	Q12107	265 aa		3	□□□□□ -1.93
SPO71	YDR104C	YOL107W	Q12239	342 aa		3	□□□□□ -1.93
SPO71	YDR104C	SAS5	Q99314	248 aa		3	□□□□□ -1.93
SPO71	YDR104C	HIS5	P07172	385 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	CLN3	P13365	580 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	RFA1	P22336	621 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	PRE7	P23724	241 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	EMC1	P25574	760 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
SPO71	YDR104C	PGM1	P33401	570 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	TSA1	P34760	196 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	RPC25	P35718	212 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	CBT1	P36038	271 aa	Predicted RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	APN2	P38207	520 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	AIM3	P38266	947 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	POP4	P38336	279 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	COS8	P38723	381 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	YHR078W	P38799	552 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	YNG2	P38806	282 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	SEO1	P39709	593 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	RBG1	P39729	369 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	NAS2	P40555	220 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	NBP35	P52920	328 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	USE1	P53146	245 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	ARE2	P53629	642 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	PRM15	Q03262	622 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	LDB18	Q07887	179 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	SYC1	Q08553	188 aa	Predicted RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	FLC1	Q08967	793 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	SRO7	Q12038	1033 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	BMT6	Q12291	365 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	PRC1	P00729	532 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	HXK2	P04807	486 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	IMA3	P0CW40	589 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	IMA4	P0CW41	589 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	RPS18A	P0CX55	146 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	RPS18B	P0CX56	146 aa	Predicted RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	RPL35A	P0CX84	120 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	RPL35B	P0CX85	120 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	ZWF1	P11412	505 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	CCA1	P21269	546 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	SRM1	P21827	482 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	DBR1	P24309	405 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	CEM1	P39525	442 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	ECM10	P39987	644 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	TIR3	P40552	269 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	MAD2	P40958	196 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	SLD3	P53135	668 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	YNL181W	P53878	407 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	SKY1	Q03656	742 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	PEX12	Q04370	399 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	MYO5	Q04439	1219 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	FRA1	Q07825	749 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	IMA2	Q08295	589 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	SVS1	Q12254	260 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	HER1	Q12276	1246 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	RPS6A	P0CX37	236 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	RPS6B	P0CX38	236 aa	Predicted RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	RER1	P25560	188 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	2.99	□□□□□ -1.93	not detected
SPO71	YDR104C	SUA5	P32579	426 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	EAP1	P36041	632 aa	Known RBP	2.99	□□□□□ -1.93
SPO71	YDR104C	PLB1	P39105	664 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	FAU1	P40099	211 aa		2.99	□□□□□ -1.93
SPO71	YDR104C	NIT1	P40447	199 aa		2.99	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms