RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A ZTA1P38230 334 aaKnown RBP-0.11□□□□□ -2.43
TFB5YDR079C-A WSC4P38739 605 aa-0.11□□□□□ -2.43
TFB5YDR079C-A NPR3P38742 1146 aa-0.11□□□□□ -2.43
TFB5YDR079C-A BAT1P38891 393 aaKnown RBP-0.11□□□□□ -2.43
TFB5YDR079C-A FAD1P38913 306 aa-0.11□□□□□ -2.43
TFB5YDR079C-A STL1P39932 569 aa-0.11□□□□□ -2.43
TFB5YDR079C-A HAT2P39984 401 aa-0.11□□□□□ -2.43
TFB5YDR079C-A PRE6P40303 254 aaKnown RBP-0.11□□□□□ -2.43
TFB5YDR079C-A SAP185P40856 1058 aa-0.11□□□□□ -2.43
TFB5YDR079C-A PHB1P40961 287 aa-0.11□□□□□ -2.43
TFB5YDR079C-A LYS14P40971 790 aa-0.11□□□□□ -2.43
TFB5YDR079C-A SNX4P47057 423 aa-0.11□□□□□ -2.43
TFB5YDR079C-A PMT3P47190 753 aa-0.11□□□□□ -2.43
TFB5YDR079C-A AZR1P50080 613 aa-0.11□□□□□ -2.43
TFB5YDR079C-A VEL1P53058 206 aa-0.11□□□□□ -2.43
TFB5YDR079C-A SYF2P53277 215 aaPredicted RBP-0.11□□□□□ -2.43
TFB5YDR079C-A MEP3P53390 489 aa-0.11□□□□□ -2.43
TFB5YDR079C-A PAP2P53632 584 aaKnown RBP-0.11□□□□□ -2.43
TFB5YDR079C-A YNL247WP53852 767 aaKnown RBP-0.11□□□□□ -2.43
TFB5YDR079C-A MTQ1P53944 314 aa-0.11□□□□□ -2.43
TFB5YDR079C-A MSC1Q03104 513 aa-0.11□□□□□ -2.43
TFB5YDR079C-A MCH1Q07376 486 aa-0.11□□□□□ -2.43
TFB5YDR079C-A YLR036CQ07986 203 aa-0.11□□□□□ -2.43
TFB5YDR079C-A RCN2Q12044 265 aa-0.11□□□□□ -2.43
TFB5YDR079C-A YPR027CQ12079 277 aa-0.11□□□□□ -2.43
TFB5YDR079C-A LEU9Q12166 604 aaKnown RBP-0.11□□□□□ -2.43
TFB5YDR079C-A RRG1Q12167 365 aaPredicted RBP-0.11□□□□□ -2.43
TFB5YDR079C-A YDL009CQ12210 107 aa-0.11□□□□□ -2.43
TFB5YDR079C-A COX17Q12287 69 aa-0.11□□□□□ -2.43
TFB5YDR079C-A GEP5Q12393 293 aa-0.11□□□□□ -2.43
TFB5YDR079C-A SKM1Q12469 655 aa-0.11□□□□□ -2.43
TFB5YDR079C-A SEC39Q12745 709 aa-0.11□□□□□ -2.43
TFB5YDR079C-A RTP1Q12751 981 aa-0.11□□□□□ -2.43
TFB5YDR079C-A YOL087CQ99247 1116 aa-0.11□□□□□ -2.43
TFB5YDR079C-A YBT1P32386 1661 aa-0.11□□□□□ -2.43
TFB5YDR079C-A DNF3Q12674 1656 aa-0.11□□□□□ -2.43
TFB5YDR079C-A SKI3P17883 1432 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A NUP170P38181 1502 aa-0.12□□□□□ -2.43
TFB5YDR079C-A PDR12Q02785 1511 aa-0.12□□□□□ -2.43
TFB5YDR079C-A COX3P00420 269 aa-0.12□□□□□ -2.43
TFB5YDR079C-A PUT2P07275 575 aa-0.12□□□□□ -2.43
TFB5YDR079C-A YAK1P14680 807 aa-0.12□□□□□ -2.43
TFB5YDR079C-A VMA2P16140 517 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A FPR1P20081 114 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A PEX34P25584 144 aa-0.12□□□□□ -2.43
TFB5YDR079C-A ADK2P26364 225 aa-0.12□□□□□ -2.43
TFB5YDR079C-A MIG1P27705 504 aa-0.12□□□□□ -2.43
TFB5YDR079C-A HSP104P31539 908 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A AUA1P32450 94 aa-0.12□□□□□ -2.43
TFB5YDR079C-A DAL3P32459 195 aa-0.12□□□□□ -2.43
TFB5YDR079C-A DPH2P32461 534 aa-0.12□□□□□ -2.43
TFB5YDR079C-A ANP1P32629 500 aa-0.12□□□□□ -2.43
TFB5YDR079C-A UBP11P36026 717 aa-0.12□□□□□ -2.43
TFB5YDR079C-A MUD2P36084 527 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A DBP7P36120 742 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A KTR3P38130 404 aaPredicted RBP-0.12□□□□□ -2.43
TFB5YDR079C-A REG2P38232 338 aa-0.12□□□□□ -2.43
TFB5YDR079C-A OSH3P38713 996 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A TVP23P38962 199 aa-0.12□□□□□ -2.43
TFB5YDR079C-A MRX1P40050 688 aa-0.12□□□□□ -2.43
TFB5YDR079C-A SER3P40054 469 aa-0.12□□□□□ -2.43
TFB5YDR079C-A VID27P40157 782 aa-0.12□□□□□ -2.43
TFB5YDR079C-A OSW5P40219 148 aa-0.12□□□□□ -2.43
TFB5YDR079C-A AGE2P40529 298 aa-0.12□□□□□ -2.43
TFB5YDR079C-A YFR035CP43608 114 aa-0.12□□□□□ -2.43
TFB5YDR079C-A PMT4P46971 762 aa-0.12□□□□□ -2.43
TFB5YDR079C-A YGR237CP50089 785 aa-0.12□□□□□ -2.43
TFB5YDR079C-A PMT5P52867 743 aa-0.12□□□□□ -2.43
TFB5YDR079C-A LSG1P53145 640 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A SPC105P53148 917 aa-0.12□□□□□ -2.43
TFB5YDR079C-A SNU71P53207 620 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A YGR127WP53275 312 aa-0.12□□□□□ -2.43
TFB5YDR079C-A TIM10P87108 93 aa-0.12□□□□□ -2.43
TFB5YDR079C-A SVL3Q03088 825 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A ABZ2Q03266 374 aa-0.12□□□□□ -2.43
TFB5YDR079C-A PRP3Q03338 469 aaPredicted RBP-0.12□□□□□ -2.43
TFB5YDR079C-A POB3Q04636 552 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A DIB1Q06819 143 aaPredicted RBP-0.12□□□□□ -2.43
TFB5YDR079C-A SYO1Q07395 620 aa-0.12□□□□□ -2.43
TFB5YDR079C-A LOT6Q07923 191 aa-0.12□□□□□ -2.43
TFB5YDR079C-A PML1Q07930 204 aaPredicted RBP-0.12□□□□□ -2.43
TFB5YDR079C-A RPN8Q08723 338 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A YPL199CQ08954 240 aa-0.12□□□□□ -2.43
TFB5YDR079C-A FCY22Q12119 530 aa-0.12□□□□□ -2.43
TFB5YDR079C-A YOR342CQ12182 319 aa-0.12□□□□□ -2.43
TFB5YDR079C-A NCE102Q12207 173 aaRIP-Chip data-0.12□□□□□ -2.43not detected
TFB5YDR079C-A RKM5Q12367 367 aa-0.12□□□□□ -2.43
TFB5YDR079C-A PFK27Q12471 397 aaPredicted RBP-0.12□□□□□ -2.43
TFB5YDR079C-A VCX1Q99385 411 aa-0.12□□□□□ -2.43
TFB5YDR079C-A ADE6P38972 1358 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A VMR1P38735 1592 aa-0.12□□□□□ -2.43
TFB5YDR079C-A CHC1P22137 1653 aaKnown RBP-0.12□□□□□ -2.43
TFB5YDR079C-A YRF1-2P40105 1681 aa-0.12□□□□□ -2.43
TFB5YDR079C-A DOP1Q03921 1698 aa-0.12□□□□□ -2.43
TFB5YDR079C-A YIL177CP40434 1758 aa-0.12□□□□□ -2.43
TFB5YDR079C-A YJL225CP40889 1758 aa-0.12□□□□□ -2.43
TFB5YDR079C-A SWI1P09547 1314 aa-0.13□□□□□ -2.43
TFB5YDR079C-A TY2B-LR1P0C2J3 1770 aa-0.13□□□□□ -2.43
TFB5YDR079C-A TY2B-FP0CX63 1770 aa-0.13□□□□□ -2.43
TFB5YDR079C-A TY2B-GR2P0CX64 1770 aa-0.13□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms