RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W ROD1Q02805 837 aa3.91□□□□□ -1.78
SRO7YPR032W YPL071CQ02864 156 aa3.91□□□□□ -1.78
SRO7YPR032W SPP1Q03012 353 aa3.91□□□□□ -1.78
SRO7YPR032W YML131WQ03102 365 aa3.91□□□□□ -1.78
SRO7YPR032W YDR514CQ04408 483 aa3.91□□□□□ -1.78
SRO7YPR032W YDR109CQ04585 715 aa3.91□□□□□ -1.78
SRO7YPR032W ECM30Q06673 1274 aa3.91□□□□□ -1.78
SRO7YPR032W SVS1Q12254 260 aa3.91□□□□□ -1.78
SRO7YPR032W YOR131CQ12486 218 aa3.91□□□□□ -1.78
SRO7YPR032W LDB19Q12502 818 aa3.91□□□□□ -1.78
SRO7YPR032W CYC1P00044 109 aaPredicted RBP3.9□□□□□ -1.78
SRO7YPR032W PHO80P20052 293 aa3.9□□□□□ -1.78
SRO7YPR032W RNR1P21524 888 aaKnown RBP3.9□□□□□ -1.78
SRO7YPR032W MRPL8P22353 238 aa3.9□□□□□ -1.78
SRO7YPR032W PPZ1P26570 692 aa3.9□□□□□ -1.78
SRO7YPR032W NDC1P32500 655 aa3.9□□□□□ -1.78
SRO7YPR032W MDL2P33311 773 aa3.9□□□□□ -1.78
SRO7YPR032W YPT52P36018 234 aaKnown RBP3.9□□□□□ -1.78
SRO7YPR032W VRP1P37370 817 aa3.9□□□□□ -1.78
SRO7YPR032W APN2P38207 520 aa3.9□□□□□ -1.78
SRO7YPR032W SIF2P38262 535 aa3.9□□□□□ -1.78
SRO7YPR032W RIM11P38615 370 aa3.9□□□□□ -1.78
SRO7YPR032W VRG4P40107 337 aa3.9□□□□□ -1.78
SRO7YPR032W ECM27P47144 725 aa3.9□□□□□ -1.78
SRO7YPR032W ASN2P49090 572 aaKnown RBP3.9□□□□□ -1.78
SRO7YPR032W YBP2P53169 641 aa3.9□□□□□ -1.78
SRO7YPR032W SWC4P53201 476 aa3.9□□□□□ -1.78
SRO7YPR032W TIM8P57744 87 aa3.9□□□□□ -1.78
SRO7YPR032W NUP116Q02630 1113 aa3.9□□□□□ -1.78
SRO7YPR032W PHM6Q05637 104 aa3.9□□□□□ -1.78
SRO7YPR032W ATG38Q05789 226 aaKnown RBP3.9□□□□□ -1.78
SRO7YPR032W YLR224WQ05947 369 aa3.9□□□□□ -1.78
SRO7YPR032W HDA3Q06623 655 aa3.9□□□□□ -1.78
SRO7YPR032W ISA1Q07821 250 aaPredicted RBP3.9□□□□□ -1.78
SRO7YPR032W YOR283WQ12040 230 aaKnown RBP3.9□□□□□ -1.78
SRO7YPR032W MHF1Q3E835 90 aa3.9□□□□□ -1.78
SRO7YPR032W GSC2P40989 1895 aa3.9□□□□□ -1.78
SRO7YPR032W RPP1AP05318 106 aaPredicted RBP3.9□□□□□ -1.79
SRO7YPR032W HOP09932 586 aa3.9□□□□□ -1.79
SRO7YPR032W LAT1P12695 482 aaKnown RBP3.9□□□□□ -1.79
SRO7YPR032W DBR1P24309 405 aaKnown RBP3.9□□□□□ -1.79
SRO7YPR032W KRR1P25586 316 aaPredicted RBP3.9□□□□□ -1.79
SRO7YPR032W RIM1P32445 135 aaKnown RBP3.9□□□□□ -1.79
SRO7YPR032W SKG6P32900 734 aaPredicted RBP3.9□□□□□ -1.79
SRO7YPR032W FRE2P36033 711 aa3.9□□□□□ -1.79
SRO7YPR032W YKL077WP36081 392 aa3.9□□□□□ -1.79
SRO7YPR032W COS111P38308 924 aa3.9□□□□□ -1.79
SRO7YPR032W BFR1P38934 470 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SRO7YPR032W MNN1P39106 762 aa3.9□□□□□ -1.79
SRO7YPR032W GIP4P39732 760 aa3.9□□□□□ -1.79
SRO7YPR032W SAW1P39735 261 aa3.9□□□□□ -1.79
SRO7YPR032W PIG2P40187 538 aa3.9□□□□□ -1.79
SRO7YPR032W NUP85P46673 744 aa3.9□□□□□ -1.79
SRO7YPR032W ERV14P53173 138 aa3.9□□□□□ -1.79
SRO7YPR032W YAT1P80235 687 aa3.9□□□□□ -1.79
SRO7YPR032W YCL001W-AP87012 153 aa3.9□□□□□ -1.79
SRO7YPR032W SLD5Q03406 294 aa3.9□□□□□ -1.79
SRO7YPR032W YPR091CQ06833 770 aa3.9□□□□□ -1.79
SRO7YPR032W YDL121CQ07541 149 aa3.9□□□□□ -1.79
SRO7YPR032W ARG3P05150 338 aa3.9□□□□□ -1.79
SRO7YPR032W MIS1P09440 975 aaKnown RBP3.9□□□□□ -1.79
SRO7YPR032W KIN1P13185 1064 aa3.9□□□□□ -1.79
SRO7YPR032W GLK1P17709 500 aaKnown RBP3.9□□□□□ -1.79
SRO7YPR032W RPL24BP24000 155 aaKnown RBP3.9□□□□□ -1.79
SRO7YPR032W TAH1P25638 111 aaPredicted RBP3.9□□□□□ -1.79
SRO7YPR032W CDC50P25656 391 aa3.9□□□□□ -1.79
SRO7YPR032W NDI1P32340 513 aa3.9□□□□□ -1.79
SRO7YPR032W SCM4P32564 187 aa3.9□□□□□ -1.79
SRO7YPR032W DOA4P32571 926 aa3.9□□□□□ -1.79
SRO7YPR032W TAT1P38085 619 aa3.9□□□□□ -1.79
SRO7YPR032W APM3P38153 483 aa3.9□□□□□ -1.79
SRO7YPR032W YAP1801P38856 637 aa3.9□□□□□ -1.79
SRO7YPR032W FAD1P38913 306 aa3.9□□□□□ -1.79
SRO7YPR032W PES4P39684 611 aa3.9□□□□□ -1.79
SRO7YPR032W RBG1P39729 369 aa3.9□□□□□ -1.79
SRO7YPR032W SLX8P40072 274 aa3.9□□□□□ -1.79
SRO7YPR032W UTP25P40498 721 aaKnown RBP3.9□□□□□ -1.79
SRO7YPR032W YJR030CP47101 745 aa3.9□□□□□ -1.79
SRO7YPR032W SPC98P53540 846 aa3.9□□□□□ -1.79
SRO7YPR032W YDR090CQ03193 310 aa3.9□□□□□ -1.79
SRO7YPR032W AIM36Q03798 255 aa3.9□□□□□ -1.79
SRO7YPR032W VPS74Q06385 345 aa3.9□□□□□ -1.79
SRO7YPR032W CRN1Q06440 651 aa3.9□□□□□ -1.79
SRO7YPR032W GPI11Q06636 219 aa3.9□□□□□ -1.79
SRO7YPR032W SWA2Q06677 668 aa3.9□□□□□ -1.79
SRO7YPR032W YDL086WQ07505 273 aa3.9□□□□□ -1.79
SRO7YPR032W YOR022CQ12204 715 aa3.9□□□□□ -1.79
SRO7YPR032W RBD2Q12270 262 aa3.9□□□□□ -1.79
SRO7YPR032W PNS1Q12412 539 aa3.9□□□□□ -1.79
SRO7YPR032W PFK27Q12471 397 aaPredicted RBP3.9□□□□□ -1.79
SRO7YPR032W YFR010W-AP0C5N0 62 aa3.89□□□□□ -1.79
SRO7YPR032W COS2P0CX12 379 aa3.89□□□□□ -1.79
SRO7YPR032W COS3P0CX13 379 aa3.89□□□□□ -1.79
SRO7YPR032W CDC23P16522 626 aa3.89□□□□□ -1.79
SRO7YPR032W FUS3P16892 353 aaKnown RBP3.89□□□□□ -1.79
SRO7YPR032W CCA1P21269 546 aa3.89□□□□□ -1.79
SRO7YPR032W APN1P22936 367 aa3.89□□□□□ -1.79
SRO7YPR032W BUD31P25337 157 aaPredicted RBP3.89□□□□□ -1.79
SRO7YPR032W RPL8BP29453 256 aaKnown RBP3.89□□□□□ -1.79
SRO7YPR032W PAH1P32567 862 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms