RNA–Protein interactions for RNA: YJL128C

PBS2, Transcript of MAP kinase kinase of the HOG signaling pathway, yeast

Gene PBS2, Length 2,007 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBS2	YJL128C	AAD3	P25612	363 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	MRPL9	P31334	269 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	SIN4	P32259	974 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	UGP1	P32861	499 aa	Known RBP	3.1	□□□□□ -1.91
PBS2	YJL128C	ECM13	P38195	257 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	PSD1	P39006	500 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	EXO1	P39875	702 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	TDA10	P42938	290 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	COG7	P53195	279 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	YGR079W	P53249	370 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	CBK1	P53894	756 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	PGA2	P53903	129 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	YDR541C	Q03049	344 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	MUB1	Q03162	620 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	PIR3	Q03180	325 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	HRD3	Q05787	833 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	PER33	Q12144	273 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	RPN13	O13563	156 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	GRR1	P24814	1151 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	SAT4	P25333	603 aa	Known RBP	3.1	□□□□□ -1.91
PBS2	YJL128C	YCR006C	P25350	157 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	LRE1	P25579	583 aa	Known RBP	3.1	□□□□□ -1.91
PBS2	YJL128C	YJU2	P28320	278 aa	Predicted RBP	3.1	□□□□□ -1.91
PBS2	YJL128C	NFU1	P32860	256 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	MUD2	P36084	527 aa	Known RBP	3.1	□□□□□ -1.91
PBS2	YJL128C	LAS21	P40367	830 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	IST3	P40565	148 aa	Predicted RBP	3.1	□□□□□ -1.91
PBS2	YJL128C	MRK1	P50873	501 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	NBP35	P52920	328 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	EGD1	Q02642	157 aa	Known RBP	3.1	□□□□□ -1.91
PBS2	YJL128C	YLH47	Q06493	454 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	TMA16	Q08687	178 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	YLR049C	Q12110	428 aa		3.1	□□□□□ -1.91
PBS2	YJL128C	RPB2	P08518	1224 aa	Known RBP	3.09	□□□□□ -1.91
PBS2	YJL128C	RRP43	P25359	394 aa	Predicted RBP	3.09	□□□□□ -1.91
PBS2	YJL128C	CNS1	P33313	385 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	NUP120	P35729	1037 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	KDX1	P36005	433 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	RSM22	P36056	628 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	PAC2	P39937	518 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	RIC1	P40395	1056 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	YIL166C	P40445	542 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	COG2	P53271	262 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	RSF1	Q05043	376 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	ATG23	Q06671	453 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	ATG10	Q07879	167 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	ULA1	Q12059	462 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	SWT1	Q12104	458 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	NBP2	Q12163	236 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	VCX1	Q99385	411 aa		3.09	□□□□□ -1.91
PBS2	YJL128C	COX1	P00401	534 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	FUM1	P08417	488 aa	Known RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	PPH21	P23594	369 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	YSP3	P25036	478 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	GFD2	P25370	566 aa	Known RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	RFA2	P26754	273 aa	Known RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	MRP20	P32387	263 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	FRE1	P32791	686 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	HES1	P35843	434 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	LHS1	P36016	881 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	SAP1	P39955	897 aa	Known RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	SIP4	P46954	829 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	BNA3	P47039	444 aa	Known RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	UPF3	P48412	387 aa	Known RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	YNL040W	P53960	456 aa	Predicted RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	REG1	Q00816	1014 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	YET2	Q04210	160 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	PLM2	Q04383	521 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	YPL191C	Q08930	360 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	AHA1	Q12449	350 aa	Known RBP	3.09	□□□□□ -1.92
PBS2	YJL128C	AI5_ALPHA	Q9ZZX1	630 aa		3.09	□□□□□ -1.92
PBS2	YJL128C	SPO16	P17122	198 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	REC107	P21651	314 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	RPA135	P22138	1203 aa	Known RBP	3.08	□□□□□ -1.92
PBS2	YJL128C	ERG8	P24521	451 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	ADY2	P25613	283 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	RPF2	P36160	344 aa	Known RBP	3.08	□□□□□ -1.92
PBS2	YJL128C	FTH1	P38310	465 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	RSM25	P40496	264 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	MSY1	P48527	492 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	ARK1	P53974	638 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	YKU80	Q04437	629 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	FAR10	Q06001	478 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	COG4	Q06096	861 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	DDC1	Q08949	612 aa		3.08	□□□□□ -1.92
PBS2	YJL128C	YLR302C	O13544	120 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	ADE5,7	P07244	802 aa	Known RBP	3.07	□□□□□ -1.92
PBS2	YJL128C	SAN1	P22470	610 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	NIP1	P32497	812 aa	Known RBP	3.07	□□□□□ -1.92
PBS2	YJL128C	SIP1	P32578	815 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	PMT1	P33775	817 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	VBA2	P38358	474 aa	Known RBP	3.07	□□□□□ -1.92
PBS2	YJL128C	TMA108	P40462	946 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	CDC1	P40986	491 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	EMC4	P53073	190 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	APM1	Q00776	475 aa	Predicted RBP	3.07	□□□□□ -1.92
PBS2	YJL128C	RCO1	Q04779	684 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	CYK3	Q07533	885 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	YDL211C	Q12121	372 aa		3.07	□□□□□ -1.92
PBS2	YJL128C	YDR262W	Q12331	272 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms