RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C POS5Q06892 414 aa3.47□□□□□ -1.85
MSM1YGR171C CFT2Q12102 859 aaPredicted RBP3.47□□□□□ -1.85
MSM1YGR171C SGT2Q12118 346 aaKnown RBP3.47□□□□□ -1.85
MSM1YGR171C NCE102Q12207 173 aaRIP-Chip data3.47□□□□□ -1.85not detected
MSM1YGR171C CEX1Q12453 761 aa3.47□□□□□ -1.85
MSM1YGR171C CBP1P07252 654 aa3.46□□□□□ -1.86
MSM1YGR171C COR1P07256 457 aa3.46□□□□□ -1.86
MSM1YGR171C PEP4P07267 405 aaKnown RBP3.46□□□□□ -1.86
MSM1YGR171C SPS4P09937 338 aa3.46□□□□□ -1.86
MSM1YGR171C SRV2P17555 526 aaKnown RBP3.46□□□□□ -1.86
MSM1YGR171C MDM10P18409 493 aa3.46□□□□□ -1.86
MSM1YGR171C AFG1P32317 509 aa3.46□□□□□ -1.86
MSM1YGR171C RRT2P38332 387 aa3.46□□□□□ -1.86
MSM1YGR171C YHR054CP38780 354 aa3.46□□□□□ -1.86
MSM1YGR171C SPT8P38915 602 aa3.46□□□□□ -1.86
MSM1YGR171C SNG1P46950 547 aa3.46□□□□□ -1.86
MSM1YGR171C URB2P47108 1174 aa3.46□□□□□ -1.86
MSM1YGR171C COS5P47187 383 aa3.46□□□□□ -1.86
MSM1YGR171C YGR149WP48236 432 aa3.46□□□□□ -1.86
MSM1YGR171C ARP5P53946 755 aa3.46□□□□□ -1.86
MSM1YGR171C STP1Q00947 519 aa3.46□□□□□ -1.86
MSM1YGR171C SKO1Q02100 647 aa3.46□□□□□ -1.86
MSM1YGR171C YVH1Q02256 364 aaKnown RBP3.46□□□□□ -1.86
MSM1YGR171C HOT1Q03213 719 aa3.46□□□□□ -1.86
MSM1YGR171C YLH47Q06493 454 aa3.46□□□□□ -1.86
MSM1YGR171C COS7Q07788 383 aa3.46□□□□□ -1.86
MSM1YGR171C SIL1Q08199 421 aa3.46□□□□□ -1.86
MSM1YGR171C THP1Q08231 455 aa3.46□□□□□ -1.86
MSM1YGR171C ATX2Q12067 313 aa3.46□□□□□ -1.86
MSM1YGR171C VPS54Q12071 889 aa3.46□□□□□ -1.86
MSM1YGR171C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.46□□□□□ -1.86not detected
MSM1YGR171C YPR089WO13585 888 aa3.45□□□□□ -1.86
MSM1YGR171C GRR1P24814 1151 aa3.45□□□□□ -1.86
MSM1YGR171C YIM1P28625 365 aa3.45□□□□□ -1.86
MSM1YGR171C YKL023WP36103 277 aaKnown RBP3.45□□□□□ -1.86
MSM1YGR171C WSS1P38838 269 aa3.45□□□□□ -1.86
MSM1YGR171C VPS45P38932 577 aa3.45□□□□□ -1.86
MSM1YGR171C EFM4P40516 257 aa3.45□□□□□ -1.86
MSM1YGR171C HXT9P40885 567 aa3.45□□□□□ -1.86
MSM1YGR171C MDE1P47095 244 aa3.45□□□□□ -1.86
MSM1YGR171C SHE10P53075 577 aa3.45□□□□□ -1.86
MSM1YGR171C YGL108CP53139 140 aa3.45□□□□□ -1.86
MSM1YGR171C SMM1P53720 384 aaKnown RBP3.45□□□□□ -1.86
MSM1YGR171C TOF1P53840 1238 aa3.45□□□□□ -1.86
MSM1YGR171C CTL1Q03220 320 aaKnown RBP3.45□□□□□ -1.86
MSM1YGR171C GRX3Q03835 250 aa3.45□□□□□ -1.86
MSM1YGR171C MRPL1Q04599 285 aa3.45□□□□□ -1.86
MSM1YGR171C YLR456WQ06199 204 aa3.45□□□□□ -1.86
MSM1YGR171C DCI1Q08558 271 aa3.45□□□□□ -1.86
MSM1YGR171C RTC5Q12108 567 aaKnown RBP3.45□□□□□ -1.86
MSM1YGR171C YLR112WQ12130 139 aa3.45□□□□□ -1.86
MSM1YGR171C INO80P53115 1489 aa3.45□□□□□ -1.86
MSM1YGR171C EDE1P34216 1381 aa3.45□□□□□ -1.86
MSM1YGR171C HIP1P06775 603 aa3.44□□□□□ -1.86
MSM1YGR171C YER190C-BP0CX94 160 aa3.44□□□□□ -1.86
MSM1YGR171C YEL077W-AP0CX95 160 aa3.44□□□□□ -1.86
MSM1YGR171C YGR296C-BP0CX96 160 aa3.44□□□□□ -1.86
MSM1YGR171C YPL283W-BP0CX97 160 aa3.44□□□□□ -1.86
MSM1YGR171C YPR204C-AP0CX98 160 aa3.44□□□□□ -1.86
MSM1YGR171C RNA1P11745 407 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C LTV1P34078 463 aa3.44□□□□□ -1.86
MSM1YGR171C PIM1P36775 1133 aa3.44□□□□□ -1.86
MSM1YGR171C THI2P38141 450 aa3.44□□□□□ -1.86
MSM1YGR171C SLM4P38247 162 aa3.44□□□□□ -1.86
MSM1YGR171C TIF5P38431 405 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C YHR131CP38835 850 aa3.44□□□□□ -1.86
MSM1YGR171C YHR210CP38893 341 aa3.44□□□□□ -1.86
MSM1YGR171C YMR124WP39523 943 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C YNL234WP53857 426 aa3.44□□□□□ -1.86
MSM1YGR171C HEF3P53978 1044 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C RPL15BP54780 204 aaPredicted RBP3.44□□□□□ -1.86
MSM1YGR171C SHR3Q02774 210 aa3.44□□□□□ -1.86
MSM1YGR171C HEL2Q05580 639 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C YDL218WQ07629 317 aa3.44□□□□□ -1.86
MSM1YGR171C RDR1Q08904 546 aa3.44□□□□□ -1.86
MSM1YGR171C KEL3Q08979 651 aaPredicted RBP3.44□□□□□ -1.86
MSM1YGR171C RPN5Q12250 445 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C MDY2Q12285 212 aa3.44□□□□□ -1.86
MSM1YGR171C BRR1Q99177 341 aaPredicted RBP3.44□□□□□ -1.86
MSM1YGR171C RAV1P47104 1357 aa3.44□□□□□ -1.86
MSM1YGR171C RHO2P06781 192 aa3.44□□□□□ -1.86
MSM1YGR171C PEP5P12868 1029 aa3.44□□□□□ -1.86
MSM1YGR171C NIP1P32497 812 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C YEL043WP32618 956 aa3.44□□□□□ -1.86
MSM1YGR171C RIB7P33312 244 aa3.44□□□□□ -1.86
MSM1YGR171C BNA4P38169 460 aa3.44□□□□□ -1.86
MSM1YGR171C TCM62P38228 572 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C YIL089WP40500 205 aa3.44□□□□□ -1.86
MSM1YGR171C ZPR1P53303 486 aaKnown RBP3.44□□□□□ -1.86
MSM1YGR171C SLG1P54867 378 aa3.44□□□□□ -1.86
MSM1YGR171C GSH2Q08220 491 aa3.44□□□□□ -1.86
MSM1YGR171C HER1Q12276 1246 aa3.44□□□□□ -1.86
MSM1YGR171C YIL002W-AQ3E7Z5 69 aa3.44□□□□□ -1.86
MSM1YGR171C GPH1P06738 902 aaKnown RBP3.43□□□□□ -1.86
MSM1YGR171C AIM17P23180 465 aaKnown RBP3.43□□□□□ -1.86
MSM1YGR171C POT1P27796 417 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
MSM1YGR171C IME2P32581 645 aa3.43□□□□□ -1.86
MSM1YGR171C ARA1P38115 344 aa3.43□□□□□ -1.86
MSM1YGR171C SIF2P38262 535 aa3.43□□□□□ -1.86
MSM1YGR171C LEU5P38702 357 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms