RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W PKP2P53170 491 aa2.12□□□□□ -2.07
SNC1YAL030W COP1P53622 1201 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W DUG3P53871 357 aa2.12□□□□□ -2.07
SNC1YAL030W YNL181WP53878 407 aa2.12□□□□□ -2.07
SNC1YAL030W ERG13P54839 491 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W RHO4Q00246 291 aa2.12□□□□□ -2.07
SNC1YAL030W SHR3Q02774 210 aa2.12□□□□□ -2.07
SNC1YAL030W YPL107WQ02873 248 aa2.12□□□□□ -2.07
SNC1YAL030W RSC9Q03124 581 aa2.12□□□□□ -2.07
SNC1YAL030W YMR130WQ04223 302 aa2.12□□□□□ -2.07
SNC1YAL030W YDR286CQ05530 114 aa2.12□□□□□ -2.07
SNC1YAL030W HEL2Q05580 639 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W DCS1Q06151 350 aa2.12□□□□□ -2.07
SNC1YAL030W YDL218WQ07629 317 aa2.12□□□□□ -2.07
SNC1YAL030W CUE5Q08412 411 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W DCI1Q08558 271 aa2.12□□□□□ -2.07
SNC1YAL030W RDR1Q08904 546 aa2.12□□□□□ -2.07
SNC1YAL030W AEP3Q12089 606 aa2.12□□□□□ -2.07
SNC1YAL030W FRE7Q12333 620 aa2.12□□□□□ -2.07
SNC1YAL030W ARP6Q12509 438 aa2.12□□□□□ -2.07
SNC1YAL030W MTR10Q99189 972 aa2.12□□□□□ -2.07
SNC1YAL030W BNR1P40450 1375 aa2.11□□□□□ -2.07
SNC1YAL030W RAD52P06778 471 aaKnown RBP2.11□□□□□ -2.07
SNC1YAL030W LPD1P09624 499 aaKnown RBP2.11□□□□□ -2.07
SNC1YAL030W HOM2P13663 365 aaKnown RBP2.11□□□□□ -2.07
SNC1YAL030W SRV2P17555 526 aaKnown RBP2.11□□□□□ -2.07
SNC1YAL030W SPO7P18410 259 aa2.11□□□□□ -2.07
SNC1YAL030W GID7P25569 745 aa2.11□□□□□ -2.07
SNC1YAL030W ATP11P32453 318 aa2.11□□□□□ -2.07
SNC1YAL030W HIR2P32480 875 aa2.11□□□□□ -2.07
SNC1YAL030W NIP1P32497 812 aaKnown RBP2.11□□□□□ -2.07
SNC1YAL030W PHD1P36093 366 aa2.11□□□□□ -2.07
SNC1YAL030W FLO10P36170 1169 aa2.11□□□□□ -2.07
SNC1YAL030W CBP4P37267 147 aa2.11□□□□□ -2.07
SNC1YAL030W ROT2P38138 954 aa2.11□□□□□ -2.07
SNC1YAL030W VHC1P38329 1120 aa2.11□□□□□ -2.07
SNC1YAL030W YER130CP39959 443 aa2.11□□□□□ -2.07
SNC1YAL030W SER3P40054 469 aa2.11□□□□□ -2.07
SNC1YAL030W VHS2P40463 436 aa2.11□□□□□ -2.07
SNC1YAL030W IAH1P41734 238 aa2.11□□□□□ -2.07
SNC1YAL030W VPS25P47142 202 aa2.11□□□□□ -2.07
SNC1YAL030W NUP100Q02629 959 aa2.11□□□□□ -2.07
SNC1YAL030W MGR3Q04472 501 aa2.11□□□□□ -2.07
SNC1YAL030W NDL1Q06568 189 aa2.11□□□□□ -2.07
SNC1YAL030W POS5Q06892 414 aa2.11□□□□□ -2.07
SNC1YAL030W SSK1Q07084 712 aa2.11□□□□□ -2.07
SNC1YAL030W RUP1Q12242 671 aa2.11□□□□□ -2.07
SNC1YAL030W RRD2Q12461 358 aa2.11□□□□□ -2.07
SNC1YAL030W YLR278CQ05854 1341 aa2.11□□□□□ -2.07
SNC1YAL030W SCEIP03882 235 aa2.1□□□□□ -2.07
SNC1YAL030W GAL4P04386 881 aa2.1□□□□□ -2.07
SNC1YAL030W RPL6BP05739 176 aaKnown RBP2.1□□□□□ -2.07
SNC1YAL030W YMR085WP0CF18 432 aa2.1□□□□□ -2.07
SNC1YAL030W BAR1P12630 587 aa2.1□□□□□ -2.07
SNC1YAL030W SEC63P14906 663 aa2.1□□□□□ -2.07
SNC1YAL030W ATP10P18496 279 aa2.1□□□□□ -2.07
SNC1YAL030W POT1P27796 417 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
SNC1YAL030W BEM1P29366 551 aa2.1□□□□□ -2.07
SNC1YAL030W SPC110P32380 944 aa2.1□□□□□ -2.07
SNC1YAL030W PRP21P32524 280 aaPredicted RBP2.1□□□□□ -2.07
SNC1YAL030W YEL043WP32618 956 aa2.1□□□□□ -2.07
SNC1YAL030W UTR4P32626 227 aa2.1□□□□□ -2.07
SNC1YAL030W SPC34P36131 295 aa2.1□□□□□ -2.07
SNC1YAL030W YPK3P38070 525 aa2.1□□□□□ -2.07
SNC1YAL030W RFC3P38629 340 aa2.1□□□□□ -2.07
SNC1YAL030W MLH1P38920 769 aa2.1□□□□□ -2.07
SNC1YAL030W CCT2P39076 527 aaKnown RBP2.1□□□□□ -2.07
SNC1YAL030W PCL6P40038 420 aa2.1□□□□□ -2.07
SNC1YAL030W RTS2P40962 232 aa2.1□□□□□ -2.07
SNC1YAL030W FYV8P46949 817 aaKnown RBP2.1□□□□□ -2.07
SNC1YAL030W ZPR1P53303 486 aaKnown RBP2.1□□□□□ -2.07
SNC1YAL030W TOF1P53840 1238 aa2.1□□□□□ -2.07
SNC1YAL030W NCS2P53923 493 aaPredicted RBP2.1□□□□□ -2.07
SNC1YAL030W RPL6AQ02326 176 aaKnown RBP2.1□□□□□ -2.07
SNC1YAL030W YPL014WQ02606 381 aa2.1□□□□□ -2.07
SNC1YAL030W TAF12Q03761 539 aa2.1□□□□□ -2.07
SNC1YAL030W PRP42Q03776 544 aaKnown RBP2.1□□□□□ -2.07
SNC1YAL030W RPN9Q04062 393 aaKnown RBP2.1□□□□□ -2.07
SNC1YAL030W COQ11Q05892 277 aa2.1□□□□□ -2.07
SNC1YAL030W MDM30Q05930 598 aa2.1□□□□□ -2.07
SNC1YAL030W YLR456WQ06199 204 aa2.1□□□□□ -2.07
SNC1YAL030W KEL3Q08979 651 aaPredicted RBP2.1□□□□□ -2.07
SNC1YAL030W VPS54Q12071 889 aa2.1□□□□□ -2.07
SNC1YAL030W NFI1Q12216 726 aa2.1□□□□□ -2.07
SNC1YAL030W HER1Q12276 1246 aa2.1□□□□□ -2.07
SNC1YAL030W CRC1Q12289 327 aa2.1□□□□□ -2.07
SNC1YAL030W HIF1Q12373 385 aa2.1□□□□□ -2.07
SNC1YAL030W FRE6Q12473 712 aa2.1□□□□□ -2.07
SNC1YAL030W YPR089WO13585 888 aa2.09□□□□□ -2.07
SNC1YAL030W CAR1P00812 333 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W ERG11P10614 530 aa2.09□□□□□ -2.07
SNC1YAL030W PHO84P25297 587 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W LAS1P36146 502 aaPredicted RBP2.09□□□□□ -2.07
SNC1YAL030W ADH5P38113 351 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W OLA1P38219 394 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W ZTA1P38230 334 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W SIF2P38262 535 aa2.09□□□□□ -2.07
SNC1YAL030W KEL1P38853 1164 aaKnown RBP2.09□□□□□ -2.07
SNC1YAL030W FAU1P40099 211 aa2.09□□□□□ -2.07
SNC1YAL030W VRG4P40107 337 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms