RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeastyeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP140YOR239W NNF2P53253 936 aa4.53□□□□□ -1.68
ABP140YOR239W ETT1Q08421 412 aaKnown RBP4.53□□□□□ -1.68
ABP140YOR239W DBP1P24784 617 aaKnown RBP4.52□□□□□ -1.69
ABP140YOR239W COQ8P27697 501 aa4.52□□□□□ -1.69
ABP140YOR239W PRP3Q03338 469 aaPredicted RBP4.52□□□□□ -1.69
ABP140YOR239W RLP24Q07915 199 aaKnown RBP4.52□□□□□ -1.69
ABP140YOR239W SWE1P32944 819 aa4.52□□□□□ -1.69
ABP140YOR239W DJP1P40564 432 aa4.52□□□□□ -1.69
ABP140YOR239W DSN1P40568 576 aa4.52□□□□□ -1.69
ABP140YOR239W YFR006WP43590 535 aa4.52□□□□□ -1.69
ABP140YOR239W TAN1P53072 289 aaPredicted RBP4.52□□□□□ -1.69
ABP140YOR239W NCR1Q12200 1170 aa4.52□□□□□ -1.69
ABP140YOR239W MSB4Q12317 492 aa4.52□□□□□ -1.69
ABP140YOR239W TAF2P23255 1407 aa4.51□□□□□ -1.69
ABP140YOR239W PCT1P13259 424 aa4.51□□□□□ -1.69
ABP140YOR239W RTG1P32607 177 aa4.51□□□□□ -1.69
ABP140YOR239W LTV1P34078 463 aa4.51□□□□□ -1.69
ABP140YOR239W MSP1P28737 362 aa4.5□□□□□ -1.69
ABP140YOR239W KNS1P32350 737 aaPredicted RBP4.5□□□□□ -1.69
ABP140YOR239W NST1P53935 1240 aa4.5□□□□□ -1.69
ABP140YOR239W DOS2P54858 310 aa4.5□□□□□ -1.69
ABP140YOR239W GRX3Q03835 250 aa4.5□□□□□ -1.69
ABP140YOR239W PAN1P32521 1480 aa4.5□□□□□ -1.69
ABP140YOR239W SRP54P20424 541 aaKnown RBP4.49□□□□□ -1.69
ABP140YOR239W CLB5P30283 435 aa4.49□□□□□ -1.69
ABP140YOR239W VPS24P36095 224 aaKnown RBP4.49□□□□□ -1.69
ABP140YOR239W BMS1Q08965 1183 aaKnown RBP4.49□□□□□ -1.69
ABP140YOR239W SCC2Q04002 1493 aa4.49□□□□□ -1.69
ABP140YOR239W MED8P38304 223 aa4.49□□□□□ -1.69
ABP140YOR239W IFH1P39520 1085 aa4.49□□□□□ -1.69
ABP140YOR239W NOP8Q08287 484 aaPredicted RBP4.49□□□□□ -1.69
ABP140YOR239W CBF5P33322 483 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
ABP140YOR239W ARL1P38116 183 aaKnown RBP4.48□□□□□ -1.69
ABP140YOR239W ECM16Q04217 1267 aaKnown RBP4.48□□□□□ -1.69
ABP140YOR239W RGA2Q06407 1009 aa4.48□□□□□ -1.69
ABP140YOR239W PIB1Q06651 286 aa4.48□□□□□ -1.69
ABP140YOR239W MHP1P43638 1398 aa4.48□□□□□ -1.69
ABP140YOR239W RPN7Q06103 429 aaKnown RBP4.47□□□□□ -1.69
ABP140YOR239W YSH1Q06224 779 aaPredicted RBP4.47□□□□□ -1.69
ABP140YOR239W RPS0AP32905 252 aaKnown RBP4.47□□□□□ -1.69
ABP140YOR239W CIN4P39110 191 aa4.47□□□□□ -1.69
ABP140YOR239W ECM1P39715 212 aa4.47□□□□□ -1.69
ABP140YOR239W VPS70P47161 811 aa4.47□□□□□ -1.69
ABP140YOR239W TPM2P40414 161 aa4.46□□□□□ -1.7
ABP140YOR239W TRM3Q07527 1436 aa4.46□□□□□ -1.7
ABP140YOR239W ATG2P53855 1592 aa4.46□□□□□ -1.7
ABP140YOR239W SWI3P32591 825 aa4.45□□□□□ -1.7
ABP140YOR239W SEC61P32915 480 aa4.45□□□□□ -1.7
ABP140YOR239W SAP190P36123 1033 aa4.45□□□□□ -1.7
ABP140YOR239W TCD1P38756 429 aa4.45□□□□□ -1.7
ABP140YOR239W VPS72Q03388 795 aa4.45□□□□□ -1.7
ABP140YOR239W POL1P13382 1468 aa4.45□□□□□ -1.7
ABP140YOR239W GEA1P47102 1408 aaPredicted RBP4.45□□□□□ -1.7
ABP140YOR239W TRP5P00931 707 aaKnown RBP4.45□□□□□ -1.7
ABP140YOR239W BCK2P33306 851 aa4.45□□□□□ -1.7
ABP140YOR239W PTC3P34221 468 aaKnown RBP4.45□□□□□ -1.7
ABP140YOR239W KIP3P53086 805 aaKnown RBP4.45□□□□□ -1.7
ABP140YOR239W SNU71P53207 620 aaKnown RBP4.45□□□□□ -1.7
ABP140YOR239W YNL035CP53962 389 aaKnown RBP4.45□□□□□ -1.7
ABP140YOR239W VPS60Q03390 229 aa4.45□□□□□ -1.7
ABP140YOR239W LSP1Q12230 341 aaKnown RBP4.45□□□□□ -1.7
ABP140YOR239W NOP14Q99207 810 aaKnown RBP4.45□□□□□ -1.7
ABP140YOR239W GCN2P15442 1659 aa4.45□□□□□ -1.7
ABP140YOR239W RAD2P07276 1031 aa4.44□□□□□ -1.7
ABP140YOR239W PET111P08468 800 aa4.44□□□□□ -1.7
ABP140YOR239W VMA1P17255 1071 aaKnown RBP4.44□□□□□ -1.7
ABP140YOR239W CLB1P24868 471 aa4.44□□□□□ -1.7
ABP140YOR239W DEP1P31385 405 aa4.44□□□□□ -1.7
ABP140YOR239W TFG1P41895 735 aaPredicted RBP4.44□□□□□ -1.7
ABP140YOR239W YCF1P39109 1515 aaKnown RBP4.44□□□□□ -1.7
ABP140YOR239W RAD51P25454 400 aa4.43□□□□□ -1.7
ABP140YOR239W RNT1Q02555 471 aa4.43□□□□□ -1.7
ABP140YOR239W RRP15Q06511 250 aaPredicted RBP4.43□□□□□ -1.7
ABP140YOR239W TEA1P47988 759 aa4.43□□□□□ -1.7
ABP140YOR239W TLG1Q03322 224 aa4.43□□□□□ -1.7
ABP140YOR239W ESC2Q06340 456 aa4.43□□□□□ -1.7
ABP140YOR239W CDC45Q08032 650 aa4.43□□□□□ -1.7
ABP140YOR239W SIN3P22579 1536 aa4.42□□□□□ -1.7
ABP140YOR239W SSK2P53599 1579 aa4.42□□□□□ -1.7
ABP140YOR239W SET4P42948 560 aa4.42□□□□□ -1.7
ABP140YOR239W CKB1P43639 278 aa4.42□□□□□ -1.7
ABP140YOR239W MDG1P53885 366 aa4.42□□□□□ -1.7
ABP140YOR239W RAD9P14737 1309 aa4.42□□□□□ -1.7
ABP140YOR239W NUP159P40477 1460 aa4.41□□□□□ -1.7
ABP140YOR239W RPP0P05317 312 aaKnown RBP4.41□□□□□ -1.7
ABP140YOR239W DSF2P38213 736 aa4.41□□□□□ -1.7
ABP140YOR239W VPS27P40343 622 aaKnown RBP4.41□□□□□ -1.7
ABP140YOR239W RSC1P53236 928 aa4.41□□□□□ -1.7
ABP140YOR239W HOS3Q02959 697 aaKnown RBP4.41□□□□□ -1.7
ABP140YOR239W ERV41Q04651 352 aa4.41□□□□□ -1.7
ABP140YOR239W YOL036WQ08206 761 aa4.41□□□□□ -1.7
ABP140YOR239W YOL087CQ99247 1116 aa4.41□□□□□ -1.7
ABP140YOR239W RRP14P36080 434 aaKnown RBP4.41□□□□□ -1.7
ABP140YOR239W APL5Q08951 932 aaKnown RBP4.41□□□□□ -1.7
ABP140YOR239W SAM3Q08986 587 aa4.41□□□□□ -1.7
ABP140YOR239W YVC1Q12324 675 aa4.41□□□□□ -1.7
ABP140YOR239W RVB2Q12464 471 aaKnown RBP4.41□□□□□ -1.7
ABP140YOR239W TSC11P40061 1430 aa4.4□□□□□ -1.7
ABP140YOR239W TOP1P04786 769 aa4.4□□□□□ -1.71
ABP140YOR239W SOL3P38858 249 aa4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms