RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YBL113CQ7M4S9 792 aa9.49□□□□□ -0.89
HDA1YNL021W RIM21P48565 533 aa9.48□□□□□ -0.89
HDA1YNL021W HST2P53686 357 aa9.48□□□□□ -0.89
HDA1YNL021W URN1Q06525 465 aaKnown RBP9.48□□□□□ -0.89
HDA1YNL021W KEX1P09620 729 aa9.47□□□□□ -0.89
HDA1YNL021W ERP5P38819 212 aa9.47□□□□□ -0.89
HDA1YNL021W SCJ1P25303 377 aa9.47□□□□□ -0.89
HDA1YNL021W ASF1P32447 279 aa9.47□□□□□ -0.89
HDA1YNL021W YGR273CP53329 174 aa9.47□□□□□ -0.89
HDA1YNL021W FPK1P53739 893 aa9.47□□□□□ -0.89
HDA1YNL021W MSC6Q08818 692 aaKnown RBP9.47□□□□□ -0.89
HDA1YNL021W KIC1P38692 1080 aa9.46□□□□□ -0.89
HDA1YNL021W SOL3P38858 249 aa9.46□□□□□ -0.89
HDA1YNL021W ESS1P22696 170 aa9.46□□□□□ -0.9
HDA1YNL021W CST6P40535 587 aa9.46□□□□□ -0.9
HDA1YNL021W POL1P13382 1468 aa9.45□□□□□ -0.9
HDA1YNL021W TRL1P09880 827 aaKnown RBP9.45□□□□□ -0.9
HDA1YNL021W RAD54P32863 898 aa9.45□□□□□ -0.9
HDA1YNL021W YJU3P28321 313 aa9.44□□□□□ -0.9
HDA1YNL021W PEP12P32854 288 aa9.44□□□□□ -0.9
HDA1YNL021W PKH3Q03306 898 aaPredicted RBP9.44□□□□□ -0.9
HDA1YNL021W SIS2P36024 562 aa9.44□□□□□ -0.9
HDA1YNL021W YAF9P53930 226 aa9.44□□□□□ -0.9
HDA1YNL021W TPS3P38426 1054 aaKnown RBP9.43□□□□□ -0.9
HDA1YNL021W YOR238WQ08634 303 aa9.43□□□□□ -0.9
HDA1YNL021W WHI5Q12416 295 aa9.43□□□□□ -0.9
HDA1YNL021W SCC2Q04002 1493 aa9.43□□□□□ -0.9
HDA1YNL021W SEC20P28791 383 aa9.43□□□□□ -0.9
HDA1YNL021W FPR4Q06205 392 aaPredicted RBP9.43□□□□□ -0.9
HDA1YNL021W MAG2Q06436 670 aaKnown RBP9.42□□□□□ -0.9
HDA1YNL021W RDS2P19541 446 aaKnown RBP9.41□□□□□ -0.9
HDA1YNL021W YCK3P39962 524 aa9.41□□□□□ -0.9
HDA1YNL021W STB3Q12427 513 aa9.41□□□□□ -0.9
HDA1YNL021W MVP1P40959 511 aaKnown RBP9.41□□□□□ -0.9
HDA1YNL021W SWE1P32944 819 aa9.4□□□□□ -0.9
HDA1YNL021W NUG1P40010 520 aaKnown RBP9.4□□□□□ -0.9
HDA1YNL021W RPO31P04051 1460 aa9.4□□□□□ -0.91
HDA1YNL021W GUT1P32190 709 aa9.4□□□□□ -0.91
HDA1YNL021W STU1P38198 1513 aa9.4□□□□□ -0.91
HDA1YNL021W RSC30P38781 883 aa9.39□□□□□ -0.91
HDA1YNL021W MDJ2P42834 146 aa9.39□□□□□ -0.91
HDA1YNL021W POL32P47110 350 aa9.39□□□□□ -0.91
HDA1YNL021W NNF1P47149 201 aa9.39□□□□□ -0.91
HDA1YNL021W MMP1Q12372 583 aa9.39□□□□□ -0.91
HDA1YNL021W MAP2P38174 421 aaKnown RBP9.38□□□□□ -0.91
HDA1YNL021W YHL050CP38721 697 aa9.38□□□□□ -0.91
HDA1YNL021W NMD2P38798 1089 aaKnown RBP9.38□□□□□ -0.91
HDA1YNL021W YHR219WP38900 624 aa9.38□□□□□ -0.91
HDA1YNL021W YEL077CQ3E7X8 1277 aa9.38□□□□□ -0.91
HDA1YNL021W GAP1P19145 602 aaPredicted RBP9.37□□□□□ -0.91
HDA1YNL021W UFD4P33202 1483 aa9.37□□□□□ -0.91
HDA1YNL021W YJR008WP47085 338 aa9.37□□□□□ -0.91
HDA1YNL021W NST1P53935 1240 aa9.37□□□□□ -0.91
HDA1YNL021W ECM23Q02710 187 aa9.37□□□□□ -0.91
HDA1YNL021W VMA1P17255 1071 aaKnown RBP9.36□□□□□ -0.91
HDA1YNL021W ATH1P48016 1211 aa9.36□□□□□ -0.91
HDA1YNL021W RKR1Q04781 1562 aa9.36□□□□□ -0.91
HDA1YNL021W CHD1P32657 1468 aa9.35□□□□□ -0.91
HDA1YNL021W SVF1Q05515 481 aa9.35□□□□□ -0.91
HDA1YNL021W MAK16P10962 306 aaPredicted RBP9.34□□□□□ -0.91
HDA1YNL021W GRE2Q12068 342 aaKnown RBP9.34□□□□□ -0.91
HDA1YNL021W CLB5P30283 435 aa9.34□□□□□ -0.91
HDA1YNL021W SEC8P32855 1065 aa9.34□□□□□ -0.91
HDA1YNL021W RNH70P53331 553 aa9.34□□□□□ -0.91
HDA1YNL021W TOP2P06786 1428 aaKnown RBP9.33□□□□□ -0.92
HDA1YNL021W SPT5P27692 1063 aaKnown RBP9.33□□□□□ -0.92
HDA1YNL021W HAA1Q12753 694 aaKnown RBP9.33□□□□□ -0.92
HDA1YNL021W YOR1P53049 1477 aa9.33□□□□□ -0.92
HDA1YNL021W SIT4P20604 311 aa9.32□□□□□ -0.92
HDA1YNL021W CWC15Q03772 175 aaKnown RBP9.32□□□□□ -0.92
HDA1YNL021W ARG8P18544 423 aa9.32□□□□□ -0.92
HDA1YNL021W PPX1P38698 397 aa9.32□□□□□ -0.92
HDA1YNL021W RTS3P53289 263 aa9.32□□□□□ -0.92
HDA1YNL021W OYE2Q03558 400 aaKnown RBP9.31□□□□□ -0.92
HDA1YNL021W YCF1P39109 1515 aaKnown RBP9.31□□□□□ -0.92
HDA1YNL021W YMR196WQ04336 1088 aa9.31□□□□□ -0.92
HDA1YNL021W YOL098CQ12496 1037 aa9.31□□□□□ -0.92
HDA1YNL021W PIB1Q06651 286 aa9.3□□□□□ -0.92
HDA1YNL021W BPT1P14772 1559 aa9.3□□□□□ -0.92
HDA1YNL021W TY2B-LR1P0C2J3 1770 aa9.28□□□□□ -0.92
HDA1YNL021W TY2B-FP0CX63 1770 aa9.28□□□□□ -0.92
HDA1YNL021W TY2B-GR2P0CX64 1770 aa9.28□□□□□ -0.92
HDA1YNL021W TY2B-CP25384 1770 aa9.28□□□□□ -0.92
HDA1YNL021W TY2B-DR2Q03494 1770 aa9.28□□□□□ -0.92
HDA1YNL021W TY1B-DR1Q03855 1755 aa9.28□□□□□ -0.92
HDA1YNL021W TY2B-DR3Q07791 1770 aaKnown RBP9.28□□□□□ -0.92
HDA1YNL021W TY2B-OR1Q12113 1770 aa9.28□□□□□ -0.92
HDA1YNL021W TY2B-DR1Q12472 1770 aa9.28□□□□□ -0.92
HDA1YNL021W TY2B-OR2Q12501 1770 aa9.28□□□□□ -0.92
HDA1YNL021W KAR5Q04746 504 aa9.28□□□□□ -0.92
HDA1YNL021W SMC4Q12267 1418 aa9.28□□□□□ -0.92
HDA1YNL021W MMS22Q06164 1454 aa9.28□□□□□ -0.92
HDA1YNL021W KTR7P40504 517 aa9.28□□□□□ -0.92
HDA1YNL021W YJR107WP47145 328 aa9.28□□□□□ -0.92
HDA1YNL021W UBX7P38349 436 aa9.27□□□□□ -0.93
HDA1YNL021W GRS1P38088 690 aaKnown RBP9.26□□□□□ -0.93
HDA1YNL021W ILV3P39522 585 aaKnown RBP9.26□□□□□ -0.93
HDA1YNL021W UBP10P53874 792 aaPredicted RBP9.26□□□□□ -0.93
HDA1YNL021W UBX5Q06682 500 aa9.26□□□□□ -0.93
HDA1YNL021W GAL2P13181 574 aa9.26□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms