RNA–Protein interactions for RNA: YMR086W

SEG1, Transcript of Component of eisosome required for proper eisosome assembly, yeast

Gene SEG1, Length 2,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEG1	YMR086W	OPI1	P21957	404 aa		4.56	□□□□□ -1.68
SEG1	YMR086W	PKC1	P24583	1151 aa		4.56	□□□□□ -1.68
SEG1	YMR086W	UBP1	P25037	809 aa		4.56	□□□□□ -1.68
SEG1	YMR086W	VPS27	P40343	622 aa	Known RBP	4.56	□□□□□ -1.68
SEG1	YMR086W	IOC3	P43596	787 aa		4.56	□□□□□ -1.68
SEG1	YMR086W	ECM16	Q04217	1267 aa	Known RBP	4.56	□□□□□ -1.68
SEG1	YMR086W	AIM7	Q12156	149 aa		4.56	□□□□□ -1.68
SEG1	YMR086W	YNR021W	P53723	404 aa	Known RBP	4.56	□□□□□ -1.68
SEG1	YMR086W	CFT2	Q12102	859 aa	Predicted RBP	4.56	□□□□□ -1.68
SEG1	YMR086W	ATE1	P16639	503 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	NSE3	Q05541	303 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	PEA2	P40091	420 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	TIM11	P81449	96 aa	Predicted RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	DBP10	Q12389	995 aa	Known RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	SSB1	P11484	613 aa	Known RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	GLC3	P32775	704 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	ESL2	P36168	1195 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	IPL1	P38991	367 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	SSB2	P40150	613 aa	Known RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	MEP1	P40260	492 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	YNL011C	P53980	444 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	HEL2	Q05580	639 aa	Known RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	RRP9	Q06506	573 aa	Known RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	IMH1	Q06704	911 aa	Known RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	NOP53	Q12080	455 aa	Known RBP	4.55	□□□□□ -1.68
SEG1	YMR086W	NKP1	Q12493	238 aa		4.55	□□□□□ -1.68
SEG1	YMR086W	PIM1	P36775	1133 aa		4.54	□□□□□ -1.68
SEG1	YMR086W	MUM2	P38236	366 aa		4.54	□□□□□ -1.68
SEG1	YMR086W	BFA1	P47113	574 aa		4.54	□□□□□ -1.68
SEG1	YMR086W	HOS2	P53096	452 aa	Predicted RBP	4.54	□□□□□ -1.68
SEG1	YMR086W	ETT1	Q08421	412 aa	Known RBP	4.54	□□□□□ -1.68
SEG1	YMR086W	SUP35	P05453	685 aa	Known RBP	4.54	□□□□□ -1.68
SEG1	YMR086W	BUD6	P41697	788 aa		4.54	□□□□□ -1.68
SEG1	YMR086W	TFB3	Q03290	321 aa		4.54	□□□□□ -1.68
SEG1	YMR086W	YSH1	Q06224	779 aa	Predicted RBP	4.54	□□□□□ -1.68
SEG1	YMR086W	IRC3	Q06683	689 aa		4.54	□□□□□ -1.68
SEG1	YMR086W	STM1	P39015	273 aa	Known RBP	4.53	□□□□□ -1.68
SEG1	YMR086W	NOC2	P39744	710 aa	Known RBP	4.53	□□□□□ -1.68
SEG1	YMR086W	OCA1	P50946	238 aa	Predicted RBP	4.53	□□□□□ -1.68
SEG1	YMR086W	ALG12	P53730	551 aa		4.53	□□□□□ -1.68
SEG1	YMR086W	CST9	Q06032	482 aa		4.53	□□□□□ -1.68
SEG1	YMR086W	PLP2	Q12017	286 aa		4.53	□□□□□ -1.68
SEG1	YMR086W	VMA1	P17255	1071 aa	Known RBP	4.52	□□□□□ -1.69
SEG1	YMR086W	POL4	P25615	582 aa		4.52	□□□□□ -1.69
SEG1	YMR086W	CDC11	P32458	415 aa		4.52	□□□□□ -1.69
SEG1	YMR086W	RAD17	P48581	401 aa		4.52	□□□□□ -1.69
SEG1	YMR086W	SYH1	Q02875	849 aa	Known RBP	4.52	□□□□□ -1.69
SEG1	YMR086W	MRF1	P30775	413 aa	Predicted RBP	4.52	□□□□□ -1.69
SEG1	YMR086W	SEC27	P41811	889 aa	Known RBP	4.52	□□□□□ -1.69
SEG1	YMR086W	NUP42	P49686	430 aa	Known RBP	4.52	□□□□□ -1.69
SEG1	YMR086W	BNI4	P53858	892 aa		4.52	□□□□□ -1.69
SEG1	YMR086W	FAP1	P53971	965 aa		4.52	□□□□□ -1.69
SEG1	YMR086W	YOL098C	Q12496	1037 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	ESF2	P53743	316 aa	Known RBP	4.51	□□□□□ -1.69
SEG1	YMR086W	HPC2	Q01448	625 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	OYE2	Q03558	400 aa	Known RBP	4.51	□□□□□ -1.69
SEG1	YMR086W	AVO1	Q08236	1176 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	RTG2	P32608	588 aa	Known RBP	4.51	□□□□□ -1.69
SEG1	YMR086W	SEC6	P32844	805 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	IES5	P40060	125 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	IES2	P40154	320 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	ATG32	P40458	529 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	MDM1	Q01846	1127 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	ENT2	Q05785	613 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	STB3	Q12427	513 aa		4.51	□□□□□ -1.69
SEG1	YMR086W	TY4B-P	A0A0B7P3V8	1104 aa		4.5	□□□□□ -1.69
SEG1	YMR086W	DIT2	P21595	489 aa		4.5	□□□□□ -1.69
SEG1	YMR086W	MFT1	P33441	392 aa	Known RBP	4.5	□□□□□ -1.69
SEG1	YMR086W	SLD2	P34252	453 aa		4.5	□□□□□ -1.69
SEG1	YMR086W	VPS24	P36095	224 aa	Known RBP	4.5	□□□□□ -1.69
SEG1	YMR086W	FUN12	P39730	1002 aa	Known RBP	4.5	□□□□□ -1.69
SEG1	YMR086W	VPS70	P47161	811 aa		4.5	□□□□□ -1.69
SEG1	YMR086W	TY4A-H	Q6Q5P6	413 aa		4.5	□□□□□ -1.69
SEG1	YMR086W	THS1	P04801	734 aa	Known RBP	4.5	□□□□□ -1.69
SEG1	YMR086W	TRX2	P22803	104 aa	Known RBP	4.5	□□□□□ -1.69
SEG1	YMR086W	MPH2	P0CD99	609 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	MPH3	P0CE00	602 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	AIM20	P40451	204 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	NNF1	P47149	201 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	ERG12	P07277	443 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	MAK16	P10962	306 aa	Predicted RBP	4.49	□□□□□ -1.69
SEG1	YMR086W	KAR1	P11927	433 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	SIT4	P20604	311 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	ECM32	P32644	1121 aa	Known RBP	4.49	□□□□□ -1.69
SEG1	YMR086W	YHR218W	P38899	603 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	BIM1	P40013	344 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	ATG1	P53104	897 aa		4.49	□□□□□ -1.69
SEG1	YMR086W	PIF1	P07271	859 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	GPI8	P49018	411 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	YML083C	Q04526	418 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	SVF1	Q05515	481 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	SMD2	Q06217	110 aa	Known RBP	4.48	□□□□□ -1.69
SEG1	YMR086W	RSC2	Q06488	889 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	CHD1	P32657	1468 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	BLI1	P35727	113 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	SET1	P38827	1080 aa	Known RBP	4.48	□□□□□ -1.69
SEG1	YMR086W	BDP1	P46678	594 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	HSP42	Q12329	375 aa		4.48	□□□□□ -1.69
SEG1	YMR086W	TPM1	P17536	199 aa	Known RBP	4.47	□□□□□ -1.69
SEG1	YMR086W	RRP14	P36080	434 aa	Known RBP	4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 6.4 ms