RNA–Protein interactions for RNA: YLR160C

ASP3-4, Transcript of Cell-wall L-asparaginase II involved in asparagine catabolism, yeast

Gene ASP3-4, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASP3-4	YLR160C	CFT1	Q06632	1357 aa	Known RBP	11.73	□□□□□ -0.53
ASP3-4	YLR160C	PSD2	P53037	1138 aa	Known RBP	11.72	□□□□□ -0.53
ASP3-4	YLR160C	TY1B-NL2	Q99337	1749 aa	Known RBP	11.71	□□□□□ -0.54
ASP3-4	YLR160C	CHZ1	P40019	153 aa	Predicted RBP	11.7	□□□□□ -0.54
ASP3-4	YLR160C	RIA1	P53893	1110 aa		11.7	□□□□□ -0.54
ASP3-4	YLR160C	YMR196W	Q04336	1088 aa		11.69	□□□□□ -0.54
ASP3-4	YLR160C	USO1	P25386	1790 aa		11.68	□□□□□ -0.54
ASP3-4	YLR160C	FKH1	P40466	484 aa		11.65	□□□□□ -0.54
ASP3-4	YLR160C	LEU3	P08638	886 aa		11.64	□□□□□ -0.55
ASP3-4	YLR160C	RTG3	P38165	486 aa		11.62	□□□□□ -0.55
ASP3-4	YLR160C	YNR029C	P53729	429 aa	Known RBP	11.61	□□□□□ -0.55
ASP3-4	YLR160C	PSK1	P31374	1356 aa		11.61	□□□□□ -0.55
ASP3-4	YLR160C	RCM1	P53972	490 aa		11.59	□□□□□ -0.55
ASP3-4	YLR160C	MLP1	Q02455	1875 aa	Known RBP	11.57	□□□□□ -0.56
ASP3-4	YLR160C	THI12	P42883	340 aa		11.56	□□□□□ -0.56
ASP3-4	YLR160C	THI5	P43534	340 aa		11.56	□□□□□ -0.56
ASP3-4	YLR160C	THI11	P47183	340 aa		11.56	□□□□□ -0.56
ASP3-4	YLR160C	NST1	P53935	1240 aa		11.56	□□□□□ -0.56
ASP3-4	YLR160C	THI13	Q07748	340 aa		11.56	□□□□□ -0.56
ASP3-4	YLR160C	YML133C	Q03099	1374 aa		11.55	□□□□□ -0.56
ASP3-4	YLR160C	YLL067C	Q07888	1374 aa		11.55	□□□□□ -0.56
ASP3-4	YLR160C	YLL066C	Q99208	1374 aa		11.55	□□□□□ -0.56
ASP3-4	YLR160C	CPS1	P27614	576 aa		11.55	□□□□□ -0.56
ASP3-4	YLR160C	PPH3	P32345	308 aa		11.55	□□□□□ -0.56
ASP3-4	YLR160C	IOC4	Q04213	475 aa		11.53	□□□□□ -0.56
ASP3-4	YLR160C	LEU2	P04173	364 aa	Predicted RBP	11.51	□□□□□ -0.57
ASP3-4	YLR160C	PRS1	P32895	427 aa	Known RBP	11.51	□□□□□ -0.57
ASP3-4	YLR160C	TSR3	Q12094	313 aa	Known RBP	11.51	□□□□□ -0.57
ASP3-4	YLR160C	RPL17A	P05740	184 aa	Known RBP	11.5	□□□□□ -0.57
ASP3-4	YLR160C	RPL17B	P46990	184 aa	Known RBP	11.5	□□□□□ -0.57
ASP3-4	YLR160C	MTR4	P47047	1073 aa	Known RBP	11.49	□□□□□ -0.57
ASP3-4	YLR160C	YEF3	P16521	1044 aa	Known RBP	11.47	□□□□□ -0.57
ASP3-4	YLR160C	PDI1	P17967	522 aa	Known RBP	11.46	□□□□□ -0.57
ASP3-4	YLR160C	TAP42	Q04372	366 aa		11.46	□□□□□ -0.57
ASP3-4	YLR160C	RPP0	P05317	312 aa	Known RBP	11.43	□□□□□ -0.58
ASP3-4	YLR160C	TRK1	P12685	1235 aa		11.43	□□□□□ -0.58
ASP3-4	YLR160C	RTF1	P53064	558 aa		11.43	□□□□□ -0.58
ASP3-4	YLR160C	ADE6	P38972	1358 aa	Known RBP	11.42	□□□□□ -0.58
ASP3-4	YLR160C	GRX4	P32642	244 aa		11.42	□□□□□ -0.58
ASP3-4	YLR160C	PRP43	P53131	767 aa	Known RBP	11.42	□□□□□ -0.58
ASP3-4	YLR160C	KAR2	P16474	682 aa	Known RBP	11.41	□□□□□ -0.58
ASP3-4	YLR160C	REB1	P21538	810 aa		11.4	□□□□□ -0.58
ASP3-4	YLR160C	CSE4	P36012	229 aa		11.37	□□□□□ -0.59
ASP3-4	YLR160C	TFA1	P36100	482 aa		11.37	□□□□□ -0.59
ASP3-4	YLR160C	VPS27	P40343	622 aa	Known RBP	11.37	□□□□□ -0.59
ASP3-4	YLR160C	CDC45	Q08032	650 aa		11.36	□□□□□ -0.59
ASP3-4	YLR160C	RPS24A	P0CX31	135 aa	Known RBP	11.35	□□□□□ -0.59
ASP3-4	YLR160C	RPS24B	P0CX32	135 aa	Known RBP	11.35	□□□□□ -0.59
ASP3-4	YLR160C	YDL144C	Q07589	356 aa		11.35	□□□□□ -0.59
ASP3-4	YLR160C	AUS1	Q08409	1394 aa		11.35	□□□□□ -0.59
ASP3-4	YLR160C	NOP2	P40991	618 aa	Known RBP	11.34	□□□□□ -0.59
ASP3-4	YLR160C	HIM1	Q06674	414 aa		11.34	□□□□□ -0.59
ASP3-4	YLR160C	RRP46	P53256	223 aa	Predicted RBP	11.31	□□□□□ -0.6
ASP3-4	YLR160C	PAP2	P53632	584 aa	Known RBP	11.31	□□□□□ -0.6
ASP3-4	YLR160C	SNF2	P22082	1703 aa		11.31	□□□□□ -0.6
ASP3-4	YLR160C	GLN1	P32288	370 aa	Known RBP	11.3	□□□□□ -0.6
ASP3-4	YLR160C	PTP3	P40048	928 aa		11.3	□□□□□ -0.6
ASP3-4	YLR160C	RTR1	P40084	226 aa	Predicted RBP	11.3	□□□□□ -0.6
ASP3-4	YLR160C	YRB30	P53107	440 aa	Predicted RBP	11.3	□□□□□ -0.6
ASP3-4	YLR160C	RPO41	P13433	1351 aa	Known RBP	11.29	□□□□□ -0.6
ASP3-4	YLR160C	GAS4	Q08271	471 aa		11.29	□□□□□ -0.6
ASP3-4	YLR160C	DPS1	P04802	557 aa	Known RBP	11.28	□□□□□ -0.6
ASP3-4	YLR160C	MPP10	P47083	593 aa	Known RBP	11.28	□□□□□ -0.6
ASP3-4	YLR160C	YAH1	Q12184	172 aa	Known RBP	11.27	□□□□□ -0.61
ASP3-4	YLR160C	RVB2	Q12464	471 aa	Known RBP	11.26	□□□□□ -0.61
ASP3-4	YLR160C	PRD1	P25375	712 aa		11.25	□□□□□ -0.61
ASP3-4	YLR160C	TY4B-H	P0C2J7	1802 aa		11.24	□□□□□ -0.61
ASP3-4	YLR160C	TY4B-J	P47024	1803 aa		11.24	□□□□□ -0.61
ASP3-4	YLR160C	SUI2	P20459	304 aa	Known RBP	11.23	□□□□□ -0.61
ASP3-4	YLR160C	PRP5	P21372	849 aa	Predicted RBP	11.23	□□□□□ -0.61
ASP3-4	YLR160C	PRP45	P28004	379 aa	Predicted RBP	11.22	□□□□□ -0.61
ASP3-4	YLR160C	THI22	Q06490	572 aa		11.2	□□□□□ -0.62
ASP3-4	YLR160C	AKL1	P38080	1108 aa	Known RBP	11.19	□□□□□ -0.62
ASP3-4	YLR160C	SAP155	P43612	1002 aa		11.19	□□□□□ -0.62
ASP3-4	YLR160C	SLM3	Q12093	417 aa		11.19	□□□□□ -0.62
ASP3-4	YLR160C	YRF1-2	P40105	1681 aa		11.19	□□□□□ -0.62
ASP3-4	YLR160C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.18	□□□□□ -0.62	not detected
ASP3-4	YLR160C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	11.18	□□□□□ -0.62	RIP-Chip
ASP3-4	YLR160C	APC1	P53886	1748 aa		11.17	□□□□□ -0.62
ASP3-4	YLR160C	TPD3	P31383	635 aa		11.16	□□□□□ -0.62
ASP3-4	YLR160C	MSB3	P48566	633 aa	Predicted RBP	11.16	□□□□□ -0.62
ASP3-4	YLR160C	DSD1	P53095	428 aa		11.16	□□□□□ -0.62
ASP3-4	YLR160C	HEF3	P53978	1044 aa	Known RBP	11.15	□□□□□ -0.62
ASP3-4	YLR160C	RRP5	Q05022	1729 aa	Known RBP	11.15	□□□□□ -0.63
ASP3-4	YLR160C	YRF1-4	O13559	1382 aa		11.15	□□□□□ -0.63
ASP3-4	YLR160C	APP1	P53933	587 aa		11.14	□□□□□ -0.63
ASP3-4	YLR160C	TCB1	Q12466	1186 aa		11.14	□□□□□ -0.63
ASP3-4	YLR160C	RTT109	Q07794	436 aa		11.13	□□□□□ -0.63
ASP3-4	YLR160C	HAA1	Q12753	694 aa	Known RBP	11.13	□□□□□ -0.63
ASP3-4	YLR160C	SIR4	P11978	1358 aa		11.13	□□□□□ -0.63
ASP3-4	YLR160C	FUN12	P39730	1002 aa	Known RBP	11.12	□□□□□ -0.63
ASP3-4	YLR160C	YCK3	P39962	524 aa		11.12	□□□□□ -0.63
ASP3-4	YLR160C	YNL050C	P53952	270 aa		11.12	□□□□□ -0.63
ASP3-4	YLR160C	CTF4	Q01454	927 aa		11.12	□□□□□ -0.63
ASP3-4	YLR160C	YIL177C	P40434	1758 aa		11.11	□□□□□ -0.63
ASP3-4	YLR160C	YJL225C	P40889	1758 aa		11.11	□□□□□ -0.63
ASP3-4	YLR160C	FPR3	P38911	411 aa	Known RBP	11.11	□□□□□ -0.63
ASP3-4	YLR160C	ENT1	Q12518	454 aa		11.11	□□□□□ -0.63
ASP3-4	YLR160C	RAD2	P07276	1031 aa		11.1	□□□□□ -0.63
ASP3-4	YLR160C	NTH2	P35172	780 aa		11.1	□□□□□ -0.63

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