RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W UGA2P38067 497 aa3.3□□□□□ -1.88
NUP100YKL068W SET1P38827 1080 aaKnown RBP3.3□□□□□ -1.88
NUP100YKL068W TY2B-BQ12491 1770 aa3.29□□□□□ -1.88
NUP100YKL068W GLC3P32775 704 aa3.29□□□□□ -1.88
NUP100YKL068W RCR1P38212 213 aa3.29□□□□□ -1.88
NUP100YKL068W SMC4Q12267 1418 aa3.28□□□□□ -1.88
NUP100YKL068W HGH1P48362 394 aaKnown RBP3.28□□□□□ -1.88
NUP100YKL068W NOP7P53261 605 aaKnown RBP3.28□□□□□ -1.88
NUP100YKL068W GEF1P37020 779 aa3.27□□□□□ -1.89
NUP100YKL068W GUA1P38625 525 aaKnown RBP3.27□□□□□ -1.89
NUP100YKL068W IQG1Q12280 1495 aa3.27□□□□□ -1.89
NUP100YKL068W VMR1P38735 1592 aa3.26□□□□□ -1.89
NUP100YKL068W MLP2P40457 1679 aa3.26□□□□□ -1.89
NUP100YKL068W DSF2P38213 736 aa3.26□□□□□ -1.89
NUP100YKL068W EPS1P40557 701 aa3.26□□□□□ -1.89
NUP100YKL068W YNR021WP53723 404 aaKnown RBP3.26□□□□□ -1.89
NUP100YKL068W SUB2Q07478 446 aaKnown RBP3.26□□□□□ -1.89
NUP100YKL068W BDF1P35817 686 aa3.26□□□□□ -1.89
NUP100YKL068W MAM3Q12296 706 aa3.26□□□□□ -1.89
NUP100YKL068W YBT1P32386 1661 aa3.25□□□□□ -1.89
NUP100YKL068W TY1B-JR2P47100 1755 aaKnown RBP3.25□□□□□ -1.89
NUP100YKL068W TY1B-ER2Q03619 1755 aa3.25□□□□□ -1.89
NUP100YKL068W TY1B-MR1Q04214 1755 aa3.25□□□□□ -1.89
NUP100YKL068W TY1B-MR2Q04670 1755 aaKnown RBP3.25□□□□□ -1.89
NUP100YKL068W TY1B-LR1Q12088 1755 aaKnown RBP3.25□□□□□ -1.89
NUP100YKL068W TY1B-NL1Q12112 1755 aa3.25□□□□□ -1.89
NUP100YKL068W TY1B-GR1Q12141 1755 aa3.25□□□□□ -1.89
NUP100YKL068W TY1B-BLQ12490 1755 aa3.25□□□□□ -1.89
NUP100YKL068W PBS2P08018 668 aa3.25□□□□□ -1.89
NUP100YKL068W PDR12Q02785 1511 aa3.24□□□□□ -1.89
NUP100YKL068W GCN2P15442 1659 aa3.24□□□□□ -1.89
NUP100YKL068W MRX12P47084 519 aa3.24□□□□□ -1.89
NUP100YKL068W MAK11P20484 414 aaKnown RBP3.23□□□□□ -1.89
NUP100YKL068W YAP3P38749 330 aa3.23□□□□□ -1.89
NUP100YKL068W VPS29P38759 282 aa3.23□□□□□ -1.89
NUP100YKL068W THI12P42883 340 aa3.23□□□□□ -1.89
NUP100YKL068W THI5P43534 340 aa3.23□□□□□ -1.89
NUP100YKL068W THI11P47183 340 aa3.23□□□□□ -1.89
NUP100YKL068W THI13Q07748 340 aa3.23□□□□□ -1.89
NUP100YKL068W NUM1Q00402 2748 aa3.23□□□□□ -1.89
NUP100YKL068W SSA4P22202 642 aaKnown RBP3.23□□□□□ -1.89
NUP100YKL068W BRL1P38770 471 aa3.23□□□□□ -1.89
NUP100YKL068W BBC1P47068 1157 aa3.23□□□□□ -1.89
NUP100YKL068W PDR5P33302 1511 aaKnown RBP3.23□□□□□ -1.89
NUP100YKL068W MRM1P25270 412 aa3.22□□□□□ -1.89
NUP100YKL068W UBP9P39967 754 aa3.22□□□□□ -1.89
NUP100YKL068W YPR117WQ06116 2489 aa3.22□□□□□ -1.89
NUP100YKL068W TOP1P04786 769 aa3.22□□□□□ -1.89
NUP100YKL068W MET10P39692 1035 aa3.22□□□□□ -1.89
NUP100YKL068W SNU71P53207 620 aaKnown RBP3.22□□□□□ -1.89
NUP100YKL068W TFB3Q03290 321 aa3.22□□□□□ -1.89
NUP100YKL068W YBL086CP38177 466 aa3.22□□□□□ -1.89
NUP100YKL068W AIM7Q12156 149 aa3.22□□□□□ -1.89
NUP100YKL068W DIT2P21595 489 aa3.21□□□□□ -1.9
NUP100YKL068W RTG3P38165 486 aa3.21□□□□□ -1.9
NUP100YKL068W IES2P40154 320 aa3.21□□□□□ -1.9
NUP100YKL068W PKC1P24583 1151 aa3.2□□□□□ -1.9
NUP100YKL068W NOP53Q12080 455 aaKnown RBP3.2□□□□□ -1.9
NUP100YKL068W YVH1Q02256 364 aaKnown RBP3.2□□□□□ -1.9
NUP100YKL068W TY1B-DR3Q99231 1755 aa3.2□□□□□ -1.9
NUP100YKL068W PAM1P37304 830 aaKnown RBP3.19□□□□□ -1.9
NUP100YKL068W RRN6P32786 894 aa3.19□□□□□ -1.9
NUP100YKL068W BRN1P38170 754 aa3.18□□□□□ -1.9
NUP100YKL068W YRB30P53107 440 aaPredicted RBP3.18□□□□□ -1.9
NUP100YKL068W SLD2P34252 453 aa3.18□□□□□ -1.9
NUP100YKL068W NUP42P49686 430 aaKnown RBP3.18□□□□□ -1.9
NUP100YKL068W MAL31P38156 614 aa3.18□□□□□ -1.9
NUP100YKL068W HPC2Q01448 625 aa3.18□□□□□ -1.9
NUP100YKL068W COQ8P27697 501 aa3.17□□□□□ -1.9
NUP100YKL068W BIM1P40013 344 aa3.17□□□□□ -1.9
NUP100YKL068W YJL007CP47080 104 aa3.17□□□□□ -1.9
NUP100YKL068W CTH1P47976 325 aa3.17□□□□□ -1.9
NUP100YKL068W SRB8P25648 1427 aa3.17□□□□□ -1.9
NUP100YKL068W CUP1-1P0CX80 61 aa3.17□□□□□ -1.9
NUP100YKL068W CUP1-2P0CX81 61 aa3.17□□□□□ -1.9
NUP100YKL068W EDS1P38073 919 aa3.17□□□□□ -1.9
NUP100YKL068W ATG32P40458 529 aa3.17□□□□□ -1.9
NUP100YKL068W ATF2P53296 535 aa3.17□□□□□ -1.9
NUP100YKL068W UBP10P53874 792 aaPredicted RBP3.17□□□□□ -1.9
NUP100YKL068W LAM6Q08001 693 aa3.17□□□□□ -1.9
NUP100YKL068W SRF1Q12516 437 aa3.17□□□□□ -1.9
NUP100YKL068W PDR11P40550 1411 aa3.16□□□□□ -1.9
NUP100YKL068W NUP157P40064 1391 aaKnown RBP3.16□□□□□ -1.9
NUP100YKL068W ALD2P47771 506 aa3.16□□□□□ -1.9
NUP100YKL068W STS1P38637 319 aa3.16□□□□□ -1.9
NUP100YKL068W ATG36P46983 293 aa3.16□□□□□ -1.9
NUP100YKL068W NUP188P52593 1655 aaKnown RBP3.16□□□□□ -1.9
NUP100YKL068W SSN2P38931 1420 aa3.15□□□□□ -1.9
NUP100YKL068W CPS1P27614 576 aa3.15□□□□□ -1.9
NUP100YKL068W SPC42P36094 363 aa3.15□□□□□ -1.9
NUP100YKL068W MAP2P38174 421 aaKnown RBP3.15□□□□□ -1.9
NUP100YKL068W ERG12P07277 443 aa3.15□□□□□ -1.91
NUP100YKL068W NUG1P40010 520 aaKnown RBP3.15□□□□□ -1.91
NUP100YKL068W YJR008WP47085 338 aa3.15□□□□□ -1.91
NUP100YKL068W SCY1P53009 804 aa3.15□□□□□ -1.91
NUP100YKL068W APP1P53933 587 aa3.15□□□□□ -1.91
NUP100YKL068W RPL34AP87262 121 aaPredicted RBP3.14□□□□□ -1.91
NUP100YKL068W VTH1P40438 1549 aa3.14□□□□□ -1.91
NUP100YKL068W VTH2P40890 1549 aa3.14□□□□□ -1.91
NUP100YKL068W EAR1Q03212 550 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms