RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C RVB2Q12464 471 aaKnown RBP3.7□□□□□ -1.82
RPN1YHR027C NHA1Q99271 985 aa3.7□□□□□ -1.82
RPN1YHR027C ARO1P08566 1588 aaKnown RBP3.7□□□□□ -1.82
RPN1YHR027C TY3B-GQ99315 1547 aa3.7□□□□□ -1.82
RPN1YHR027C CLB1P24868 471 aa3.7□□□□□ -1.82
RPN1YHR027C RRP14P36080 434 aaKnown RBP3.7□□□□□ -1.82
RPN1YHR027C CDC45Q08032 650 aa3.7□□□□□ -1.82
RPN1YHR027C HIF1Q12373 385 aa3.7□□□□□ -1.82
RPN1YHR027C YOR1P53049 1477 aa3.7□□□□□ -1.82
RPN1YHR027C SPT16P32558 1035 aaKnown RBP3.69□□□□□ -1.82
RPN1YHR027C VPS27P40343 622 aaKnown RBP3.69□□□□□ -1.82
RPN1YHR027C PAP2P53632 584 aaKnown RBP3.69□□□□□ -1.82
RPN1YHR027C UBP10P53874 792 aaPredicted RBP3.69□□□□□ -1.82
RPN1YHR027C RNT1Q02555 471 aa3.69□□□□□ -1.82
RPN1YHR027C HOS3Q02959 697 aaKnown RBP3.69□□□□□ -1.82
RPN1YHR027C ORM2Q06144 216 aa3.69□□□□□ -1.82
RPN1YHR027C PDR15Q04182 1529 aaKnown RBP3.69□□□□□ -1.82
RPN1YHR027C GDB1Q06625 1536 aa3.69□□□□□ -1.82
RPN1YHR027C RPP0P05317 312 aaKnown RBP3.69□□□□□ -1.82
RPN1YHR027C RIM101P33400 625 aa3.69□□□□□ -1.82
RPN1YHR027C PEA2P40091 420 aa3.69□□□□□ -1.82
RPN1YHR027C RPC82P32349 654 aa3.69□□□□□ -1.82
RPN1YHR027C COG8Q04632 607 aa3.69□□□□□ -1.82
RPN1YHR027C YVC1Q12324 675 aa3.69□□□□□ -1.82
RPN1YHR027C DNF1P32660 1571 aa3.68□□□□□ -1.82
RPN1YHR027C ATG2P53855 1592 aa3.68□□□□□ -1.82
RPN1YHR027C MRS2Q01926 470 aa3.68□□□□□ -1.82
RPN1YHR027C VPS30Q02948 557 aa3.68□□□□□ -1.82
RPN1YHR027C UTP13Q05946 817 aaKnown RBP3.68□□□□□ -1.82
RPN1YHR027C ULS1Q08562 1619 aa3.68□□□□□ -1.82
RPN1YHR027C DNF2Q12675 1612 aa3.68□□□□□ -1.82
RPN1YHR027C GEA2P39993 1459 aaKnown RBP3.68□□□□□ -1.82
RPN1YHR027C SWH1P35845 1188 aa3.68□□□□□ -1.82
RPN1YHR027C PXR1P53335 271 aaPredicted RBP3.68□□□□□ -1.82
RPN1YHR027C YNL050CP53952 270 aa3.68□□□□□ -1.82
RPN1YHR027C LCD1Q04377 747 aa3.68□□□□□ -1.82
RPN1YHR027C SML1Q04964 104 aa3.68□□□□□ -1.82
RPN1YHR027C TY1B-AO13527 1196 aaKnown RBP3.67□□□□□ -1.82
RPN1YHR027C SUP35P05453 685 aaKnown RBP3.67□□□□□ -1.82
RPN1YHR027C MCM2P29469 868 aa3.67□□□□□ -1.82
RPN1YHR027C YMR1P47147 688 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
RPN1YHR027C VID30P53076 958 aa3.67□□□□□ -1.82
RPN1YHR027C SEC39Q12745 709 aa3.67□□□□□ -1.82
RPN1YHR027C RAD3P06839 778 aa3.67□□□□□ -1.82
RPN1YHR027C SSA1P10591 642 aaKnown RBP3.67□□□□□ -1.82
RPN1YHR027C SSA2P10592 639 aaKnown RBP3.67□□□□□ -1.82
RPN1YHR027C SPT5P27692 1063 aaKnown RBP3.67□□□□□ -1.82
RPN1YHR027C HAP5Q02516 242 aa3.67□□□□□ -1.82
RPN1YHR027C NFI1Q12216 726 aa3.67□□□□□ -1.82
RPN1YHR027C YLL054CQ12244 843 aa3.67□□□□□ -1.82
RPN1YHR027C RKR1Q04781 1562 aa3.67□□□□□ -1.82
RPN1YHR027C TOP1P04786 769 aa3.66□□□□□ -1.82
RPN1YHR027C PSE1P32337 1089 aaKnown RBP3.66□□□□□ -1.82
RPN1YHR027C YGL140CP53120 1219 aa3.66□□□□□ -1.82
RPN1YHR027C YMR102CQ03177 834 aa3.66□□□□□ -1.82
RPN1YHR027C RPO31P04051 1460 aa3.66□□□□□ -1.82
RPN1YHR027C ROM2P51862 1356 aaKnown RBP3.66□□□□□ -1.82
RPN1YHR027C MCM1P11746 286 aa3.66□□□□□ -1.82
RPN1YHR027C MSH1P25846 959 aa3.66□□□□□ -1.82
RPN1YHR027C BDP1P46678 594 aa3.66□□□□□ -1.82
RPN1YHR027C YNL035CP53962 389 aaKnown RBP3.66□□□□□ -1.82
RPN1YHR027C VPS15P22219 1454 aa3.66□□□□□ -1.82
RPN1YHR027C TY3B-IQ7LHG5 1498 aaKnown RBP3.66□□□□□ -1.82
RPN1YHR027C RKM3P38222 552 aa3.66□□□□□ -1.82
RPN1YHR027C ITC1P53125 1264 aa3.66□□□□□ -1.82
RPN1YHR027C SNF2P22082 1703 aa3.66□□□□□ -1.82
RPN1YHR027C MET5P47169 1442 aa3.65□□□□□ -1.82
RPN1YHR027C PDS5Q04264 1277 aa3.65□□□□□ -1.82
RPN1YHR027C ESC2Q06340 456 aa3.65□□□□□ -1.82
RPN1YHR027C NDL1Q06568 189 aa3.65□□□□□ -1.82
RPN1YHR027C PUS1Q12211 544 aaKnown RBP3.65□□□□□ -1.82
RPN1YHR027C RAD16P31244 790 aa3.65□□□□□ -1.83
RPN1YHR027C CEP3P40969 608 aa3.65□□□□□ -1.83
RPN1YHR027C LEM3P42838 414 aa3.65□□□□□ -1.83
RPN1YHR027C STU2P46675 888 aa3.65□□□□□ -1.83
RPN1YHR027C MDM38Q08179 573 aa3.65□□□□□ -1.83
RPN1YHR027C SLP1Q12232 587 aa3.65□□□□□ -1.83
RPN1YHR027C PUP2P32379 260 aa3.64□□□□□ -1.83
RPN1YHR027C NUP145P49687 1317 aa3.64□□□□□ -1.83
RPN1YHR027C KAR3P17119 729 aa3.64□□□□□ -1.83
RPN1YHR027C CLN1P20437 546 aa3.64□□□□□ -1.83
RPN1YHR027C CDC11P32458 415 aa3.64□□□□□ -1.83
RPN1YHR027C IAH1P41734 238 aa3.64□□□□□ -1.83
RPN1YHR027C YOR389WQ08912 624 aa3.64□□□□□ -1.83
RPN1YHR027C IQG1Q12280 1495 aa3.64□□□□□ -1.83
RPN1YHR027C SPB4P25808 606 aaPredicted RBP3.63□□□□□ -1.83
RPN1YHR027C TOA1P32773 286 aa3.63□□□□□ -1.83
RPN1YHR027C RTT107P38850 1070 aa3.63□□□□□ -1.83
RPN1YHR027C YBT1P32386 1661 aa3.63□□□□□ -1.83
RPN1YHR027C HAP1P0CE41 1502 aa3.63□□□□□ -1.83
RPN1YHR027C ZUO1P32527 433 aaKnown RBP3.63□□□□□ -1.83
RPN1YHR027C AIM20P40451 204 aa3.63□□□□□ -1.83
RPN1YHR027C MGA2P40578 1113 aa3.63□□□□□ -1.83
RPN1YHR027C SFI1Q12369 946 aa3.63□□□□□ -1.83
RPN1YHR027C PSO2P30620 661 aa3.63□□□□□ -1.83
RPN1YHR027C OLA1P38219 394 aaKnown RBP3.63□□□□□ -1.83
RPN1YHR027C YMR124WP39523 943 aaKnown RBP3.63□□□□□ -1.83
RPN1YHR027C AUS1Q08409 1394 aa3.62□□□□□ -1.83
RPN1YHR027C PBY1P38254 753 aa3.62□□□□□ -1.83
RPN1YHR027C VPS41P38959 992 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms