RNA–Protein interactions for RNA: YFL018C

LPD1, Transcript of Dihydrolipoamide dehydrogenase, yeastyeast

Gene LPD1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LPD1YFL018C RRP14P36080 434 aaKnown RBP9.31□□□□□ -0.92
LPD1YFL018C RSC1P53236 928 aa9.3□□□□□ -0.92
LPD1YFL018C TLG1Q03322 224 aa9.3□□□□□ -0.92
LPD1YFL018C LCD1Q04377 747 aa9.3□□□□□ -0.92
LPD1YFL018C NUP157P40064 1391 aaKnown RBP9.3□□□□□ -0.92
LPD1YFL018C VPS30Q02948 557 aa9.29□□□□□ -0.92
LPD1YFL018C YOL087CQ99247 1116 aa9.29□□□□□ -0.92
LPD1YFL018C PDR15Q04182 1529 aaKnown RBP9.28□□□□□ -0.92
LPD1YFL018C ERV41Q04651 352 aa9.28□□□□□ -0.92
LPD1YFL018C YVC1Q12324 675 aa9.28□□□□□ -0.92
LPD1YFL018C YOR1P53049 1477 aa9.27□□□□□ -0.93
LPD1YFL018C SWH1P35845 1188 aa9.27□□□□□ -0.93
LPD1YFL018C UBP10P53874 792 aaPredicted RBP9.27□□□□□ -0.93
LPD1YFL018C MDG1P53885 366 aa9.27□□□□□ -0.93
LPD1YFL018C UTP13Q05946 817 aaKnown RBP9.27□□□□□ -0.93
LPD1YFL018C MDM38Q08179 573 aa9.27□□□□□ -0.93
LPD1YFL018C DNF1P32660 1571 aa9.27□□□□□ -0.93
LPD1YFL018C RKR1Q04781 1562 aa9.27□□□□□ -0.93
LPD1YFL018C SPB4P25808 606 aaPredicted RBP9.26□□□□□ -0.93
LPD1YFL018C RIM101P33400 625 aa9.26□□□□□ -0.93
LPD1YFL018C APL5Q08951 932 aaKnown RBP9.26□□□□□ -0.93
LPD1YFL018C TOP1P04786 769 aa9.26□□□□□ -0.93
LPD1YFL018C MRS2Q01926 470 aa9.25□□□□□ -0.93
LPD1YFL018C RSC8P43609 557 aaKnown RBP9.24□□□□□ -0.93
LPD1YFL018C PUS1Q12211 544 aaKnown RBP9.24□□□□□ -0.93
LPD1YFL018C HIF1Q12373 385 aa9.24□□□□□ -0.93
LPD1YFL018C RAD3P06839 778 aa9.23□□□□□ -0.93
LPD1YFL018C PDS5Q04264 1277 aa9.23□□□□□ -0.93
LPD1YFL018C SEC39Q12745 709 aa9.23□□□□□ -0.93
LPD1YFL018C ZUO1P32527 433 aaKnown RBP9.22□□□□□ -0.93
LPD1YFL018C ITC1P53125 1264 aa9.22□□□□□ -0.93
LPD1YFL018C YNL050CP53952 270 aa9.22□□□□□ -0.93
LPD1YFL018C ALD3P54114 506 aa9.22□□□□□ -0.93
LPD1YFL018C SFI1Q12369 946 aa9.22□□□□□ -0.93
LPD1YFL018C MCM2P29469 868 aa9.21□□□□□ -0.93
LPD1YFL018C PXR1P53335 271 aaPredicted RBP9.21□□□□□ -0.93
LPD1YFL018C COG8Q04632 607 aa9.21□□□□□ -0.93
LPD1YFL018C DNF2Q12675 1612 aa9.21□□□□□ -0.94
LPD1YFL018C PSE1P32337 1089 aaKnown RBP9.21□□□□□ -0.94
LPD1YFL018C RPC82P32349 654 aa9.21□□□□□ -0.94
LPD1YFL018C YMR124WP39523 943 aaKnown RBP9.21□□□□□ -0.94
LPD1YFL018C STU2P46675 888 aa9.21□□□□□ -0.94
LPD1YFL018C BDP1P46678 594 aa9.21□□□□□ -0.94
LPD1YFL018C YGL140CP53120 1219 aa9.21□□□□□ -0.94
LPD1YFL018C NHA1Q99271 985 aa9.21□□□□□ -0.94
LPD1YFL018C ARO1P08566 1588 aaKnown RBP9.2□□□□□ -0.94
LPD1YFL018C GEA2P39993 1459 aaKnown RBP9.2□□□□□ -0.94
LPD1YFL018C SPT5P27692 1063 aaKnown RBP9.2□□□□□ -0.94
LPD1YFL018C YMR102CQ03177 834 aa9.2□□□□□ -0.94
LPD1YFL018C ULS1Q08562 1619 aa9.19□□□□□ -0.94
LPD1YFL018C KAR3P17119 729 aa9.19□□□□□ -0.94
LPD1YFL018C RTT107P38850 1070 aa9.19□□□□□ -0.94
LPD1YFL018C HAP5Q02516 242 aa9.19□□□□□ -0.94
LPD1YFL018C SML1Q04964 104 aa9.19□□□□□ -0.94
LPD1YFL018C YLL054CQ12244 843 aa9.19□□□□□ -0.94
LPD1YFL018C MET5P47169 1442 aa9.19□□□□□ -0.94
LPD1YFL018C GDB1Q06625 1536 aa9.18□□□□□ -0.94
LPD1YFL018C RKM3P38222 552 aa9.18□□□□□ -0.94
LPD1YFL018C YMR1P47147 688 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
LPD1YFL018C PEA2P40091 420 aa9.17□□□□□ -0.94
LPD1YFL018C TY3B-GQ99315 1547 aa9.17□□□□□ -0.94
LPD1YFL018C VPS15P22219 1454 aa9.16□□□□□ -0.94
LPD1YFL018C SSA1P10591 642 aaKnown RBP9.16□□□□□ -0.94
LPD1YFL018C SSA2P10592 639 aaKnown RBP9.16□□□□□ -0.94
LPD1YFL018C PUP2P32379 260 aa9.16□□□□□ -0.94
LPD1YFL018C SPT16P32558 1035 aaKnown RBP9.16□□□□□ -0.94
LPD1YFL018C CEP3P40969 608 aa9.16□□□□□ -0.94
LPD1YFL018C VID30P53076 958 aa9.16□□□□□ -0.94
LPD1YFL018C ORC1P54784 914 aaPredicted RBP9.16□□□□□ -0.94
LPD1YFL018C TOA1P32773 286 aa9.15□□□□□ -0.94
LPD1YFL018C NDC80P40460 691 aa9.15□□□□□ -0.94
LPD1YFL018C SUP35P05453 685 aaKnown RBP9.15□□□□□ -0.95
LPD1YFL018C MIC60P36112 540 aa9.15□□□□□ -0.95
LPD1YFL018C RIO2P40160 425 aaKnown RBP9.15□□□□□ -0.95
LPD1YFL018C NDL1Q06568 189 aa9.15□□□□□ -0.95
LPD1YFL018C MGA2P40578 1113 aa9.14□□□□□ -0.95
LPD1YFL018C ROM2P51862 1356 aaKnown RBP9.13□□□□□ -0.95
LPD1YFL018C ATG2P53855 1592 aa9.13□□□□□ -0.95
LPD1YFL018C PSO2P30620 661 aa9.13□□□□□ -0.95
LPD1YFL018C CDC11P32458 415 aa9.13□□□□□ -0.95
LPD1YFL018C ORM2Q06144 216 aa9.13□□□□□ -0.95
LPD1YFL018C NOP56Q12460 504 aaKnown RBP RIP-Chip data9.13□□□□□ -0.95 RIP-Chip
LPD1YFL018C SNF2P22082 1703 aa9.13□□□□□ -0.95
LPD1YFL018C YBT1P32386 1661 aa9.13□□□□□ -0.95
LPD1YFL018C TY1B-AO13527 1196 aaKnown RBP9.12□□□□□ -0.95
LPD1YFL018C PBY1P38254 753 aa9.12□□□□□ -0.95
LPD1YFL018C VPS41P38959 992 aa9.12□□□□□ -0.95
LPD1YFL018C NOP7P53261 605 aaKnown RBP9.12□□□□□ -0.95
LPD1YFL018C MPP10P47083 593 aaKnown RBP9.11□□□□□ -0.95
LPD1YFL018C YOR389WQ08912 624 aa9.11□□□□□ -0.95
LPD1YFL018C NFI1Q12216 726 aa9.11□□□□□ -0.95
LPD1YFL018C TY3B-IQ7LHG5 1498 aaKnown RBP9.11□□□□□ -0.95
LPD1YFL018C MSH1P25846 959 aa9.1□□□□□ -0.95
LPD1YFL018C CYC8P14922 966 aa9.1□□□□□ -0.95
LPD1YFL018C YKR023WP36119 530 aaKnown RBP9.1□□□□□ -0.95
LPD1YFL018C GDT1P38301 280 aaPredicted RBP9.1□□□□□ -0.95
LPD1YFL018C LEM3P42838 414 aa9.1□□□□□ -0.95
LPD1YFL018C PEX19Q07418 342 aa9.1□□□□□ -0.95
LPD1YFL018C MCM1P11746 286 aa9.09□□□□□ -0.95
LPD1YFL018C SRS2P12954 1174 aa9.09□□□□□ -0.95
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms