RNA–Protein interactions for RNA: YFL018C

LPD1, Transcript of Dihydrolipoamide dehydrogenase, yeastyeast

Gene LPD1, Length 1,500 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LPD1YFL018C BFR2Q06631 534 aaKnown RBP12.38□□□□□ -0.43
LPD1YFL018C RQC2Q12532 1038 aaKnown RBP12.21□□□□□ -0.46
LPD1YFL018C NOP2P40991 618 aaKnown RBP11.69□□□□□ -0.54
LPD1YFL018C EBP2P36049 427 aaKnown RBP11.31□□□□□ -0.6
LPD1YFL018C CAB3P36076 571 aa11.3□□□□□ -0.6
LPD1YFL018C SPA2P23201 1466 aaKnown RBP11.25□□□□□ -0.61
LPD1YFL018C SKI3P17883 1432 aaKnown RBP11.21□□□□□ -0.61
LPD1YFL018C NSR1P27476 414 aaKnown RBP RIP-Chip data11.19□□□□□ -0.62not detected
LPD1YFL018C URN1Q06525 465 aaKnown RBP11.1□□□□□ -0.63
LPD1YFL018C SIS2P36024 562 aa10.99□□□□□ -0.65
LPD1YFL018C SSN2P38931 1420 aa10.88□□□□□ -0.67
LPD1YFL018C YPR148CQ06523 435 aa10.81□□□□□ -0.68
LPD1YFL018C SGS1P35187 1447 aa10.73□□□□□ -0.69
LPD1YFL018C TCB3Q03640 1545 aaKnown RBP10.71□□□□□ -0.7
LPD1YFL018C TAF7Q05021 590 aa10.63□□□□□ -0.71
LPD1YFL018C ENP1P38333 483 aaKnown RBP10.56□□□□□ -0.72
LPD1YFL018C AVT3P36062 692 aa10.53□□□□□ -0.72
LPD1YFL018C YFR016CP43597 1233 aaKnown RBP10.53□□□□□ -0.72
LPD1YFL018C DRS1P32892 752 aaKnown RBP10.51□□□□□ -0.73
LPD1YFL018C TCB2P48231 1178 aa10.48□□□□□ -0.73
LPD1YFL018C RPS0BP46654 252 aaKnown RBP10.44□□□□□ -0.74
LPD1YFL018C MNN4P36044 1178 aa10.43□□□□□ -0.74
LPD1YFL018C CHD1P32657 1468 aa10.41□□□□□ -0.74
LPD1YFL018C MMS22Q06164 1454 aa10.39□□□□□ -0.75
LPD1YFL018C UFD4P33202 1483 aa10.36□□□□□ -0.75
LPD1YFL018C STH1P32597 1359 aa10.35□□□□□ -0.75
LPD1YFL018C TFA1P36100 482 aa10.32□□□□□ -0.76
LPD1YFL018C CLC1P17891 233 aa10.27□□□□□ -0.77
LPD1YFL018C LEO1P38439 464 aa10.25□□□□□ -0.77
LPD1YFL018C QCR6P00127 147 aa10.23□□□□□ -0.77
LPD1YFL018C INO80P53115 1489 aa10.23□□□□□ -0.77
LPD1YFL018C CWC22P53333 577 aaKnown RBP10.23□□□□□ -0.77
LPD1YFL018C SEC3P33332 1336 aaKnown RBP10.23□□□□□ -0.77
LPD1YFL018C AIM44Q99299 758 aa10.23□□□□□ -0.77
LPD1YFL018C MON2P48563 1636 aaPredicted RBP10.22□□□□□ -0.77
LPD1YFL018C XRN1P22147 1528 aaKnown RBP10.22□□□□□ -0.77
LPD1YFL018C SPP41P38904 1435 aa10.22□□□□□ -0.77
LPD1YFL018C RSE1Q04693 1361 aaKnown RBP10.22□□□□□ -0.77
LPD1YFL018C ECM5Q03214 1411 aa10.16□□□□□ -0.78
LPD1YFL018C IME2P32581 645 aa10.16□□□□□ -0.78
LPD1YFL018C RLF2Q12495 606 aa10.16□□□□□ -0.78
LPD1YFL018C POL5P39985 1022 aaKnown RBP10.15□□□□□ -0.78
LPD1YFL018C SPT7P35177 1332 aa10.14□□□□□ -0.79
LPD1YFL018C DIP2Q12220 943 aaPredicted RBP10.14□□□□□ -0.79
LPD1YFL018C PRS1P32895 427 aaKnown RBP10.13□□□□□ -0.79
LPD1YFL018C YRB30P53107 440 aaPredicted RBP10.12□□□□□ -0.79
LPD1YFL018C KRI1P42846 591 aaKnown RBP10.12□□□□□ -0.79
LPD1YFL018C NOP53Q12080 455 aaKnown RBP10.11□□□□□ -0.79
LPD1YFL018C FPR3P38911 411 aaKnown RBP10.1□□□□□ -0.79
LPD1YFL018C YGR130CP53278 816 aa10.07□□□□□ -0.8
LPD1YFL018C NUG1P40010 520 aaKnown RBP10.07□□□□□ -0.8
LPD1YFL018C TRM732Q03496 1420 aa10.05□□□□□ -0.8
LPD1YFL018C DEF1P35732 738 aaKnown RBP10.05□□□□□ -0.8
LPD1YFL018C EAF7P53911 425 aaKnown RBP10.05□□□□□ -0.8
LPD1YFL018C PEP1P32319 1579 aa10.02□□□□□ -0.8
LPD1YFL018C ENV11P53246 860 aa10.02□□□□□ -0.81
LPD1YFL018C IKI3Q06706 1349 aaKnown RBP9.98□□□□□ -0.81
LPD1YFL018C OPY1P38271 328 aa9.98□□□□□ -0.81
LPD1YFL018C RIX1P38883 763 aaPredicted RBP9.97□□□□□ -0.81
LPD1YFL018C RNA1P11745 407 aaKnown RBP9.96□□□□□ -0.82
LPD1YFL018C PDR10P51533 1564 aa9.95□□□□□ -0.82
LPD1YFL018C FPR4Q06205 392 aaPredicted RBP9.94□□□□□ -0.82
LPD1YFL018C SPT21P35209 758 aa9.93□□□□□ -0.82
LPD1YFL018C CFT1Q06632 1357 aaKnown RBP9.93□□□□□ -0.82
LPD1YFL018C TOP2P06786 1428 aaKnown RBP9.92□□□□□ -0.82
LPD1YFL018C MLP2P40457 1679 aa9.91□□□□□ -0.82
LPD1YFL018C SNF7P39929 240 aaKnown RBP9.91□□□□□ -0.82
LPD1YFL018C BUD4P47136 1447 aa9.9□□□□□ -0.83
LPD1YFL018C SRB8P25648 1427 aa9.89□□□□□ -0.83
LPD1YFL018C MYO2P19524 1574 aaKnown RBP9.89□□□□□ -0.83
LPD1YFL018C SAS10Q12136 610 aaPredicted RBP9.88□□□□□ -0.83
LPD1YFL018C NUP170P38181 1502 aa9.88□□□□□ -0.83
LPD1YFL018C RPC31P17890 251 aa9.87□□□□□ -0.83
LPD1YFL018C MTC1P47018 478 aaKnown RBP9.87□□□□□ -0.83
LPD1YFL018C THO2P53552 1597 aaKnown RBP9.87□□□□□ -0.83
LPD1YFL018C PAF1P38351 445 aa9.87□□□□□ -0.83
LPD1YFL018C YTA7P40340 1379 aa9.86□□□□□ -0.83
LPD1YFL018C FUN12P39730 1002 aaKnown RBP9.84□□□□□ -0.83
LPD1YFL018C SPT2P06843 333 aaPredicted RBP9.82□□□□□ -0.84
LPD1YFL018C YLR419WQ06698 1435 aaKnown RBP9.82□□□□□ -0.84
LPD1YFL018C SPC110P32380 944 aa9.82□□□□□ -0.84
LPD1YFL018C PSH1Q12161 406 aa9.81□□□□□ -0.84
LPD1YFL018C MMS1Q06211 1407 aa9.8□□□□□ -0.84
LPD1YFL018C HSP82P02829 709 aaKnown RBP9.8□□□□□ -0.84
LPD1YFL018C MYO4P32492 1471 aa9.79□□□□□ -0.84
LPD1YFL018C SSM4P40318 1319 aa9.78□□□□□ -0.84
LPD1YFL018C ROX1P25042 368 aa9.77□□□□□ -0.84
LPD1YFL018C IRC20Q06554 1556 aa9.77□□□□□ -0.84
LPD1YFL018C NMD2P38798 1089 aaKnown RBP9.77□□□□□ -0.85
LPD1YFL018C PLP2Q12017 286 aa9.77□□□□□ -0.85
LPD1YFL018C NOP58Q12499 511 aaKnown RBP9.76□□□□□ -0.85
LPD1YFL018C NAP1P25293 417 aaKnown RBP9.75□□□□□ -0.85
LPD1YFL018C STU1P38198 1513 aa9.74□□□□□ -0.85
LPD1YFL018C LEU3P08638 886 aa9.72□□□□□ -0.85
LPD1YFL018C SMC4Q12267 1418 aa9.72□□□□□ -0.85
LPD1YFL018C RTT106P40161 455 aa9.72□□□□□ -0.85
LPD1YFL018C YPK9Q12697 1472 aa9.71□□□□□ -0.85
LPD1YFL018C SMC3P47037 1230 aa9.71□□□□□ -0.86
LPD1YFL018C SLN1P39928 1220 aaPredicted RBP9.7□□□□□ -0.86
LPD1YFL018C CTR9P89105 1077 aa9.69□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 89.7 ms