RNA–Protein interactions for RNA: YDR104C

SPO71, Transcript of Meiosis-specific protein required for spore wall formation, yeastyeast

Gene SPO71, Length 3,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPO71YDR104C BRN1P38170 754 aa3.69□□□□□ -1.82
SPO71YDR104C VPS72Q03388 795 aa3.69□□□□□ -1.82
SPO71YDR104C APL5Q08951 932 aaKnown RBP3.69□□□□□ -1.82
SPO71YDR104C PDR10P51533 1564 aa3.69□□□□□ -1.82
SPO71YDR104C TY1B-AO13527 1196 aaKnown RBP3.68□□□□□ -1.82
SPO71YDR104C NOP58Q12499 511 aaKnown RBP3.68□□□□□ -1.82
SPO71YDR104C CDC11P32458 415 aa3.68□□□□□ -1.82
SPO71YDR104C SEC9P40357 651 aa3.68□□□□□ -1.82
SPO71YDR104C LEM3P42838 414 aa3.67□□□□□ -1.82
SPO71YDR104C TPO2P53283 614 aa3.67□□□□□ -1.82
SPO71YDR104C POL1P13382 1468 aa3.67□□□□□ -1.82
SPO71YDR104C ISW1P38144 1129 aa3.67□□□□□ -1.82
SPO71YDR104C DSN1P40568 576 aa3.67□□□□□ -1.82
SPO71YDR104C RSC8P43609 557 aaKnown RBP3.67□□□□□ -1.82
SPO71YDR104C YLL054CQ12244 843 aa3.66□□□□□ -1.82
SPO71YDR104C YMR196WQ04336 1088 aa3.66□□□□□ -1.82
SPO71YDR104C SUP35P05453 685 aaKnown RBP3.66□□□□□ -1.82
SPO71YDR104C HSC82P15108 705 aaKnown RBP3.66□□□□□ -1.82
SPO71YDR104C ABP1P15891 592 aaKnown RBP3.66□□□□□ -1.82
SPO71YDR104C ATG36P46983 293 aa3.66□□□□□ -1.82
SPO71YDR104C RKR1Q04781 1562 aa3.65□□□□□ -1.82
SPO71YDR104C DEP1P31385 405 aa3.65□□□□□ -1.82
SPO71YDR104C ASF1P32447 279 aa3.65□□□□□ -1.82
SPO71YDR104C HOS4P40480 1083 aa3.65□□□□□ -1.82
SPO71YDR104C TAF13P11747 167 aa3.65□□□□□ -1.83
SPO71YDR104C DAL5P15365 543 aa3.65□□□□□ -1.83
SPO71YDR104C MRPL32P25348 183 aa3.64□□□□□ -1.83
SPO71YDR104C AIM20P40451 204 aa3.64□□□□□ -1.83
SPO71YDR104C RRP15Q06511 250 aaPredicted RBP3.64□□□□□ -1.83
SPO71YDR104C RPC31P17890 251 aa3.64□□□□□ -1.83
SPO71YDR104C VID30P53076 958 aa3.64□□□□□ -1.83
SPO71YDR104C ALD3P54114 506 aa3.64□□□□□ -1.83
SPO71YDR104C CFT1Q06632 1357 aaKnown RBP3.64□□□□□ -1.83
SPO71YDR104C SRP54P20424 541 aaKnown RBP3.64□□□□□ -1.83
SPO71YDR104C CLB5P30283 435 aa3.64□□□□□ -1.83
SPO71YDR104C NAB3P38996 802 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SPO71YDR104C BMS1Q08965 1183 aaKnown RBP3.64□□□□□ -1.83
SPO71YDR104C CFT2Q12102 859 aaPredicted RBP3.64□□□□□ -1.83
SPO71YDR104C ROX1P25042 368 aa3.63□□□□□ -1.83
SPO71YDR104C POL5P39985 1022 aaKnown RBP3.63□□□□□ -1.83
SPO71YDR104C RAD51P25454 400 aa3.63□□□□□ -1.83
SPO71YDR104C RPC82P32349 654 aa3.63□□□□□ -1.83
SPO71YDR104C PAP2P53632 584 aaKnown RBP3.63□□□□□ -1.83
SPO71YDR104C YVC1Q12324 675 aa3.63□□□□□ -1.83
SPO71YDR104C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
SPO71YDR104C YMR124WP39523 943 aaKnown RBP3.62□□□□□ -1.83
SPO71YDR104C RCF1Q03713 159 aa3.62□□□□□ -1.83
SPO71YDR104C ERV41Q04651 352 aa3.62□□□□□ -1.83
SPO71YDR104C YAH1Q12184 172 aaKnown RBP3.62□□□□□ -1.83
SPO71YDR104C BPT1P14772 1559 aa3.62□□□□□ -1.83
SPO71YDR104C TY3B-GQ99315 1547 aa3.62□□□□□ -1.83
SPO71YDR104C MED8P38304 223 aa3.62□□□□□ -1.83
SPO71YDR104C MTR4P47047 1073 aaKnown RBP3.62□□□□□ -1.83
SPO71YDR104C SEC20P28791 383 aa3.62□□□□□ -1.83
SPO71YDR104C YPP1P46951 817 aa3.61□□□□□ -1.83
SPO71YDR104C DJP1P40564 432 aa3.61□□□□□ -1.83
SPO71YDR104C KIP3P53086 805 aaKnown RBP3.61□□□□□ -1.83
SPO71YDR104C CDC25P04821 1589 aa3.61□□□□□ -1.83
SPO71YDR104C PIM1P36775 1133 aa3.61□□□□□ -1.83
SPO71YDR104C OSW7P43611 510 aa3.61□□□□□ -1.83
SPO71YDR104C IMH1Q06704 911 aaKnown RBP3.61□□□□□ -1.83
SPO71YDR104C NFI1Q12216 726 aa3.61□□□□□ -1.83
SPO71YDR104C TY4B-PA0A0B7P3V8 1104 aa3.6□□□□□ -1.83
SPO71YDR104C ECM1P39715 212 aa3.6□□□□□ -1.83
SPO71YDR104C SLN1P39928 1220 aaPredicted RBP3.6□□□□□ -1.83
SPO71YDR104C GGA1Q06336 557 aa3.6□□□□□ -1.83
SPO71YDR104C VPS5Q92331 675 aa3.6□□□□□ -1.83
SPO71YDR104C STU1P38198 1513 aa3.6□□□□□ -1.83
SPO71YDR104C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SPO71YDR104C BUD4P47136 1447 aa3.6□□□□□ -1.83
SPO71YDR104C SWI3P32591 825 aa3.59□□□□□ -1.83
SPO71YDR104C YOR389WQ08912 624 aa3.59□□□□□ -1.83
SPO71YDR104C TOP2P06786 1428 aaKnown RBP3.59□□□□□ -1.83
SPO71YDR104C CHZ1P40019 153 aaPredicted RBP3.59□□□□□ -1.83
SPO71YDR104C YIL055CP40523 627 aaKnown RBP3.59□□□□□ -1.83
SPO71YDR104C YDR341CQ05506 607 aaKnown RBP3.59□□□□□ -1.83
SPO71YDR104C LAM6Q08001 693 aa3.59□□□□□ -1.83
SPO71YDR104C SPO14P36126 1683 aa3.59□□□□□ -1.83
SPO71YDR104C YOR1P53049 1477 aa3.59□□□□□ -1.83
SPO71YDR104C PKH1Q03407 766 aa3.59□□□□□ -1.84
SPO71YDR104C MMS1Q06211 1407 aa3.59□□□□□ -1.84
SPO71YDR104C BDP1P46678 594 aa3.58□□□□□ -1.84
SPO71YDR104C RTS3P53289 263 aa3.58□□□□□ -1.84
SPO71YDR104C CLF1Q12309 687 aaPredicted RBP3.58□□□□□ -1.84
SPO71YDR104C CLN1P20437 546 aa3.58□□□□□ -1.84
SPO71YDR104C PHO87P25360 923 aa3.58□□□□□ -1.84
SPO71YDR104C NPR3P38742 1146 aa3.58□□□□□ -1.84
SPO71YDR104C RPT2P40327 437 aaKnown RBP3.58□□□□□ -1.84
SPO71YDR104C TPS3P38426 1054 aaKnown RBP3.58□□□□□ -1.84
SPO71YDR104C SSP1P38871 571 aa3.58□□□□□ -1.84
SPO71YDR104C CEF1Q03654 590 aaPredicted RBP3.58□□□□□ -1.84
SPO71YDR104C NDL1Q06568 189 aa3.58□□□□□ -1.84
SPO71YDR104C BUD21Q08492 214 aaPredicted RBP3.58□□□□□ -1.84
SPO71YDR104C GLE1Q12315 538 aa3.58□□□□□ -1.84
SPO71YDR104C DMA2P53924 522 aa3.57□□□□□ -1.84
SPO71YDR104C PSR1Q07800 427 aa3.57□□□□□ -1.84
SPO71YDR104C BNI1P41832 1953 aa3.57□□□□□ -1.84
SPO71YDR104C NOT3P06102 836 aaKnown RBP3.57□□□□□ -1.84
SPO71YDR104C KAR3P17119 729 aa3.57□□□□□ -1.84
SPO71YDR104C PUP2P32379 260 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms