RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB1YDL229W TY4A-JP47023 414 aa5.11□□□□□ -1.59
SSB1YDL229W GGA1Q06336 557 aa5.11□□□□□ -1.59
SSB1YDL229W RAD2P07276 1031 aa5.11□□□□□ -1.59
SSB1YDL229W DSF2P38213 736 aa5.11□□□□□ -1.59
SSB1YDL229W SSF1P38789 453 aaPredicted RBP5.11□□□□□ -1.59
SSB1YDL229W NAB3P38996 802 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SSB1YDL229W PRY3P47033 881 aa5.11□□□□□ -1.59
SSB1YDL229W MEH1Q02205 184 aa5.11□□□□□ -1.59
SSB1YDL229W GDE1Q02979 1223 aa5.11□□□□□ -1.59
SSB1YDL229W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
SSB1YDL229W TY4B-PA0A0B7P3V8 1104 aa5.1□□□□□ -1.59
SSB1YDL229W CLN1P20437 546 aa5.1□□□□□ -1.59
SSB1YDL229W PHO87P25360 923 aa5.1□□□□□ -1.59
SSB1YDL229W CFT1Q06632 1357 aaKnown RBP5.1□□□□□ -1.59
SSB1YDL229W ECM1P39715 212 aa5.09□□□□□ -1.59
SSB1YDL229W YVC1Q12324 675 aa5.09□□□□□ -1.59
SSB1YDL229W ATG2P53855 1592 aa5.09□□□□□ -1.59
SSB1YDL229W SRP54P20424 541 aaKnown RBP5.09□□□□□ -1.6
SSB1YDL229W BDP1P46678 594 aa5.09□□□□□ -1.6
SSB1YDL229W SSK2P53599 1579 aa5.08□□□□□ -1.6
SSB1YDL229W UBP1P25037 809 aa5.08□□□□□ -1.6
SSB1YDL229W RPL5P26321 297 aaKnown RBP5.08□□□□□ -1.6
SSB1YDL229W LAM1P38851 1228 aa5.08□□□□□ -1.6
SSB1YDL229W YMR124WP39523 943 aaKnown RBP5.08□□□□□ -1.6
SSB1YDL229W HEL2Q05580 639 aaKnown RBP5.08□□□□□ -1.6
SSB1YDL229W YLR257WQ06146 321 aaKnown RBP5.08□□□□□ -1.6
SSB1YDL229W MDS3P53094 1487 aa5.08□□□□□ -1.6
SSB1YDL229W PEP1P32319 1579 aa5.08□□□□□ -1.6
SSB1YDL229W GAL11P19659 1081 aa5.07□□□□□ -1.6
SSB1YDL229W NPR3P38742 1146 aa5.07□□□□□ -1.6
SSB1YDL229W SEC27P41811 889 aaKnown RBP5.07□□□□□ -1.6
SSB1YDL229W YML020WQ03722 664 aa5.07□□□□□ -1.6
SSB1YDL229W YOR389WQ08912 624 aa5.07□□□□□ -1.6
SSB1YDL229W SPB4P25808 606 aaPredicted RBP5.07□□□□□ -1.6
SSB1YDL229W NMD3P38861 518 aaKnown RBP5.07□□□□□ -1.6
SSB1YDL229W PUP2P32379 260 aa5.06□□□□□ -1.6
SSB1YDL229W IES2P40154 320 aa5.06□□□□□ -1.6
SSB1YDL229W TFG1P41895 735 aaPredicted RBP5.06□□□□□ -1.6
SSB1YDL229W YPP1P46951 817 aa5.06□□□□□ -1.6
SSB1YDL229W GIR2Q03768 265 aaPredicted RBP5.06□□□□□ -1.6
SSB1YDL229W COG8Q04632 607 aa5.06□□□□□ -1.6
SSB1YDL229W YPR172WQ06608 200 aa5.06□□□□□ -1.6
SSB1YDL229W RPC31P17890 251 aa5.05□□□□□ -1.6
SSB1YDL229W RPA135P22138 1203 aaKnown RBP5.05□□□□□ -1.6
SSB1YDL229W ROX1P25042 368 aa5.05□□□□□ -1.6
SSB1YDL229W RIM101P33400 625 aa5.05□□□□□ -1.6
SSB1YDL229W MGA2P40578 1113 aa5.05□□□□□ -1.6
SSB1YDL229W APL6P46682 809 aa5.05□□□□□ -1.6
SSB1YDL229W BNI4P53858 892 aa5.05□□□□□ -1.6
SSB1YDL229W RRB1Q04225 511 aaKnown RBP5.05□□□□□ -1.6
SSB1YDL229W ORM2Q06144 216 aa5.05□□□□□ -1.6
SSB1YDL229W NDL1Q06568 189 aa5.05□□□□□ -1.6
SSB1YDL229W TAF2P23255 1407 aa5.05□□□□□ -1.6
SSB1YDL229W RPL17AP05740 184 aaKnown RBP5.04□□□□□ -1.6
SSB1YDL229W GCD6P32501 712 aaKnown RBP5.04□□□□□ -1.6
SSB1YDL229W MPE1P35728 441 aaKnown RBP5.04□□□□□ -1.6
SSB1YDL229W SLN1P39928 1220 aaPredicted RBP5.04□□□□□ -1.6
SSB1YDL229W RSC1P53236 928 aa5.04□□□□□ -1.6
SSB1YDL229W SYH1Q02875 849 aaKnown RBP5.04□□□□□ -1.6
SSB1YDL229W SPC42P36094 363 aa5.04□□□□□ -1.6
SSB1YDL229W ALD2P47771 506 aa5.04□□□□□ -1.6
SSB1YDL229W ITC1P53125 1264 aa5.04□□□□□ -1.6
SSB1YDL229W LSP1Q12230 341 aaKnown RBP5.04□□□□□ -1.6
SSB1YDL229W CHD1P32657 1468 aa5.04□□□□□ -1.6
SSB1YDL229W KEX2P13134 814 aa5.03□□□□□ -1.6
SSB1YDL229W SEC6P32844 805 aa5.03□□□□□ -1.6
SSB1YDL229W VTC3Q02725 835 aa5.03□□□□□ -1.6
SSB1YDL229W SLP1Q12232 587 aa5.03□□□□□ -1.6
SSB1YDL229W GLE1Q12315 538 aa5.03□□□□□ -1.6
SSB1YDL229W ESP1Q03018 1630 aa5.03□□□□□ -1.6
SSB1YDL229W SWI3P32591 825 aa5.02□□□□□ -1.61
SSB1YDL229W HXT5P38695 592 aa5.02□□□□□ -1.61
SSB1YDL229W SIT1P39980 628 aa5.02□□□□□ -1.61
SSB1YDL229W RRP9Q06506 573 aaKnown RBP5.02□□□□□ -1.61
SSB1YDL229W ARR1Q06596 294 aa5.02□□□□□ -1.61
SSB1YDL229W PSO2P30620 661 aa5.02□□□□□ -1.61
SSB1YDL229W MRX12P47084 519 aa5.02□□□□□ -1.61
SSB1YDL229W HUL5P53119 910 aa5.02□□□□□ -1.61
SSB1YDL229W BNI5P53890 448 aaKnown RBP5.02□□□□□ -1.61
SSB1YDL229W RSC2Q06488 889 aa5.02□□□□□ -1.61
SSB1YDL229W CDC45Q08032 650 aa5.02□□□□□ -1.61
SSB1YDL229W CMP2P14747 604 aa5.01□□□□□ -1.61
SSB1YDL229W SEC23P15303 768 aaKnown RBP5.01□□□□□ -1.61
SSB1YDL229W HOS2P53096 452 aaPredicted RBP5.01□□□□□ -1.61
SSB1YDL229W JJJ1P53863 590 aa5.01□□□□□ -1.61
SSB1YDL229W UTP4Q06679 776 aaKnown RBP5.01□□□□□ -1.61
SSB1YDL229W SPT5P27692 1063 aaKnown RBP5□□□□□ -1.61
SSB1YDL229W MRF1P30775 413 aaPredicted RBP5□□□□□ -1.61
SSB1YDL229W BEM4P39011 633 aa5□□□□□ -1.61
SSB1YDL229W YMR1P47147 688 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
SSB1YDL229W UBP10P53874 792 aaPredicted RBP5□□□□□ -1.61
SSB1YDL229W VPS30Q02948 557 aa5□□□□□ -1.61
SSB1YDL229W KAR3P17119 729 aa5□□□□□ -1.61
SSB1YDL229W ZUO1P32527 433 aaKnown RBP5□□□□□ -1.61
SSB1YDL229W NPL4P33755 580 aa5□□□□□ -1.61
SSB1YDL229W YKR023WP36119 530 aaKnown RBP5□□□□□ -1.61
SSB1YDL229W PES4P39684 611 aa5□□□□□ -1.61
SSB1YDL229W FAF1P40546 346 aaPredicted RBP5□□□□□ -1.61
SSB1YDL229W GYP7P48365 746 aa5□□□□□ -1.61
SSB1YDL229W PXR1P53335 271 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms