RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W GCN20P43535 752 aaKnown RBP2.39□□□□□ -2.03
USO1YDL058W BTN2P53286 410 aa2.39□□□□□ -2.03
USO1YDL058W DSL1P53847 754 aa2.39□□□□□ -2.03
USO1YDL058W NSR1P27476 414 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
USO1YDL058W IMP2'P32351 346 aa2.39□□□□□ -2.03
USO1YDL058W PTH2P34222 208 aa2.39□□□□□ -2.03
USO1YDL058W VPS24P36095 224 aaKnown RBP2.39□□□□□ -2.03
USO1YDL058W BUD6P41697 788 aa2.39□□□□□ -2.03
USO1YDL058W CTR9P89105 1077 aa2.39□□□□□ -2.03
USO1YDL058W YSH1Q06224 779 aaPredicted RBP2.39□□□□□ -2.03
USO1YDL058W ATP4P05626 244 aa2.39□□□□□ -2.03
USO1YDL058W SSA4P22202 642 aaKnown RBP2.39□□□□□ -2.03
USO1YDL058W PKC1P24583 1151 aa2.39□□□□□ -2.03
USO1YDL058W NUG1P40010 520 aaKnown RBP2.39□□□□□ -2.03
USO1YDL058W VMA4P22203 233 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W CLB1P24868 471 aa2.38□□□□□ -2.03
USO1YDL058W TY4A-JP47023 414 aa2.38□□□□□ -2.03
USO1YDL058W ARP5P53946 755 aa2.38□□□□□ -2.03
USO1YDL058W CWC21Q03375 135 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W TAF1P46677 1066 aa2.38□□□□□ -2.03
USO1YDL058W NOP4P37838 685 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W TSR2Q06672 205 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W GLE1Q12315 538 aa2.38□□□□□ -2.03
USO1YDL058W CLN2P20438 545 aa2.38□□□□□ -2.03
USO1YDL058W PEX5P35056 612 aa2.38□□□□□ -2.03
USO1YDL058W RPG1P38249 964 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W RPT2P40327 437 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W SET2P46995 733 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W YLR257WQ06146 321 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W TSR1Q07381 788 aaKnown RBP2.38□□□□□ -2.03
USO1YDL058W RRI2Q12348 645 aa2.38□□□□□ -2.03
USO1YDL058W HIF1Q12373 385 aa2.38□□□□□ -2.03
USO1YDL058W CLC1P17891 233 aa2.37□□□□□ -2.03
USO1YDL058W NFU1P32860 256 aa2.37□□□□□ -2.03
USO1YDL058W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
USO1YDL058W BLI1P35727 113 aa2.37□□□□□ -2.03
USO1YDL058W RPP1BP10622 106 aaKnown RBP2.37□□□□□ -2.03
USO1YDL058W PUP2P32379 260 aa2.37□□□□□ -2.03
USO1YDL058W SPR3P41901 512 aa2.37□□□□□ -2.03
USO1YDL058W UTP13Q05946 817 aaKnown RBP2.37□□□□□ -2.03
USO1YDL058W YKL050CP35736 922 aa2.37□□□□□ -2.03
USO1YDL058W SWH1P35845 1188 aa2.37□□□□□ -2.03
USO1YDL058W RAD26P40352 1085 aa2.37□□□□□ -2.03
USO1YDL058W DJP1P40564 432 aa2.37□□□□□ -2.03
USO1YDL058W TPM1P17536 199 aaKnown RBP2.37□□□□□ -2.03
USO1YDL058W DEP1P31385 405 aa2.37□□□□□ -2.03
USO1YDL058W BRL1P38770 471 aa2.37□□□□□ -2.03
USO1YDL058W KAR3P17119 729 aa2.36□□□□□ -2.03
USO1YDL058W KRR1P25586 316 aaPredicted RBP2.36□□□□□ -2.03
USO1YDL058W CDC11P32458 415 aa2.36□□□□□ -2.03
USO1YDL058W GGA2P38817 585 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W CDC48P25694 835 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W PEP7P32609 515 aa2.36□□□□□ -2.03
USO1YDL058W PPX1P38698 397 aa2.36□□□□□ -2.03
USO1YDL058W HSE1P38753 452 aa2.36□□□□□ -2.03
USO1YDL058W SAP1P39955 897 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W BDP1P46678 594 aa2.36□□□□□ -2.03
USO1YDL058W JJJ1P53863 590 aa2.36□□□□□ -2.03
USO1YDL058W TFB3Q03290 321 aa2.36□□□□□ -2.03
USO1YDL058W YJU2P28320 278 aaPredicted RBP2.36□□□□□ -2.03
USO1YDL058W ZUO1P32527 433 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W HOS2P53096 452 aaPredicted RBP2.36□□□□□ -2.03
USO1YDL058W SPS1P08458 490 aa2.36□□□□□ -2.03
USO1YDL058W KSS1P14681 368 aa2.36□□□□□ -2.03
USO1YDL058W STI1P15705 589 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
USO1YDL058W SPB1P25582 841 aaPredicted RBP2.36□□□□□ -2.03
USO1YDL058W BRN1P38170 754 aa2.36□□□□□ -2.03
USO1YDL058W NOC2P39744 710 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W TFG1P41895 735 aaPredicted RBP2.36□□□□□ -2.03
USO1YDL058W PRP3Q03338 469 aaPredicted RBP2.36□□□□□ -2.03
USO1YDL058W URN1Q06525 465 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W YOL098CQ12496 1037 aa2.36□□□□□ -2.03
USO1YDL058W THO2P53552 1597 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W HIS4P00815 799 aaKnown RBP2.36□□□□□ -2.03
USO1YDL058W LAM1P38851 1228 aa2.36□□□□□ -2.03
USO1YDL058W IES1P43579 692 aa2.36□□□□□ -2.03
USO1YDL058W GIR2Q03768 265 aaPredicted RBP2.36□□□□□ -2.03
USO1YDL058W SPT7P35177 1332 aa2.35□□□□□ -2.03
USO1YDL058W YBR287WP38355 427 aa2.35□□□□□ -2.03
USO1YDL058W SYH1Q02875 849 aaKnown RBP2.35□□□□□ -2.03
USO1YDL058W RCF1Q03713 159 aa2.35□□□□□ -2.03
USO1YDL058W YPR097WQ06839 1073 aa2.35□□□□□ -2.03
USO1YDL058W PUS1Q12211 544 aaKnown RBP2.35□□□□□ -2.03
USO1YDL058W OXP1P28273 1286 aa2.35□□□□□ -2.03
USO1YDL058W JNM1P36224 373 aa2.35□□□□□ -2.03
USO1YDL058W REF2P42073 533 aaPredicted RBP2.35□□□□□ -2.03
USO1YDL058W PKH1Q03407 766 aa2.35□□□□□ -2.03
USO1YDL058W ADY3Q07732 790 aa2.35□□□□□ -2.03
USO1YDL058W SCM3Q12334 223 aa2.35□□□□□ -2.03
USO1YDL058W RKM4Q12504 494 aa2.35□□□□□ -2.03
USO1YDL058W SSE1P32589 693 aaKnown RBP2.35□□□□□ -2.03
USO1YDL058W SSF1P38789 453 aaPredicted RBP2.35□□□□□ -2.03
USO1YDL058W EAF7P53911 425 aaKnown RBP2.35□□□□□ -2.03
USO1YDL058W BRE1Q07457 700 aaKnown RBP2.35□□□□□ -2.03
USO1YDL058W RPP1AP05318 106 aaPredicted RBP2.35□□□□□ -2.03
USO1YDL058W PAM1P37304 830 aaKnown RBP2.35□□□□□ -2.03
USO1YDL058W TPM2P40414 161 aa2.35□□□□□ -2.03
USO1YDL058W POB3Q04636 552 aaKnown RBP2.35□□□□□ -2.03
USO1YDL058W RPP2BP02400 110 aaKnown RBP2.34□□□□□ -2.03
USO1YDL058W SWE1P32944 819 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms