RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W YKL100CP34248 587 aa1.97□□□□□ -2.09
VPS15YBR097W MIC60P36112 540 aa1.97□□□□□ -2.09
VPS15YBR097W TSR1Q07381 788 aaKnown RBP1.97□□□□□ -2.09
VPS15YBR097W SMC2P38989 1170 aaKnown RBP1.97□□□□□ -2.09
VPS15YBR097W ISW2Q08773 1120 aa1.97□□□□□ -2.09
VPS15YBR097W SAP1P39955 897 aaKnown RBP1.97□□□□□ -2.09
VPS15YBR097W HUL5P53119 910 aa1.97□□□□□ -2.09
VPS15YBR097W ITC1P53125 1264 aa1.97□□□□□ -2.09
VPS15YBR097W SLD2P34252 453 aa1.96□□□□□ -2.09
VPS15YBR097W DSL1P53847 754 aa1.96□□□□□ -2.09
VPS15YBR097W YEL1P34225 687 aa1.96□□□□□ -2.1
VPS15YBR097W PSR2Q07949 397 aa1.96□□□□□ -2.1
VPS15YBR097W ABP1P15891 592 aaKnown RBP1.96□□□□□ -2.1
VPS15YBR097W RIM101P33400 625 aa1.96□□□□□ -2.1
VPS15YBR097W LOC1P43586 204 aaPredicted RBP1.96□□□□□ -2.1
VPS15YBR097W BTN2P53286 410 aa1.96□□□□□ -2.1
VPS15YBR097W BMS1Q08965 1183 aaKnown RBP1.96□□□□□ -2.1
VPS15YBR097W ARP8Q12386 881 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
VPS15YBR097W MRC1P25588 1096 aa1.96□□□□□ -2.1
VPS15YBR097W YJU2P28320 278 aaPredicted RBP1.96□□□□□ -2.1
VPS15YBR097W CSE4P36012 229 aa1.96□□□□□ -2.1
VPS15YBR097W SNF7P39929 240 aaKnown RBP1.96□□□□□ -2.1
VPS15YBR097W MRX12P47084 519 aa1.96□□□□□ -2.1
VPS15YBR097W SNU71P53207 620 aaKnown RBP1.96□□□□□ -2.1
VPS15YBR097W RCF1Q03713 159 aa1.96□□□□□ -2.1
VPS15YBR097W SEC20P28791 383 aa1.95□□□□□ -2.1
VPS15YBR097W IMP2'P32351 346 aa1.95□□□□□ -2.1
VPS15YBR097W CCL1P37366 393 aa1.95□□□□□ -2.1
VPS15YBR097W ETT1Q08421 412 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W RPP1AP05318 106 aaPredicted RBP1.95□□□□□ -2.1
VPS15YBR097W CLB1P24868 471 aa1.95□□□□□ -2.1
VPS15YBR097W CLB5P30283 435 aa1.95□□□□□ -2.1
VPS15YBR097W SSE1P32589 693 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W SEG2P34250 1132 aa1.95□□□□□ -2.1
VPS15YBR097W RPC37P36121 282 aa1.95□□□□□ -2.1
VPS15YBR097W RPG1P38249 964 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W RGA1P39083 1007 aa1.95□□□□□ -2.1
VPS15YBR097W GCN20P43535 752 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W URN1Q06525 465 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W IMH1Q06704 911 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W OPY2Q06810 360 aa1.95□□□□□ -2.1
VPS15YBR097W ARO1P08566 1588 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W PUP2P32379 260 aa1.95□□□□□ -2.1
VPS15YBR097W EFB1P32471 206 aaKnown RBP1.95□□□□□ -2.1
VPS15YBR097W BUD6P41697 788 aa1.95□□□□□ -2.1
VPS15YBR097W TAF1P46677 1066 aa1.95□□□□□ -2.1
VPS15YBR097W UFD4P33202 1483 aa1.94□□□□□ -2.1
VPS15YBR097W REI1P38344 393 aaPredicted RBP1.94□□□□□ -2.1
VPS15YBR097W RPN11P43588 306 aaKnown RBP1.94□□□□□ -2.1
VPS15YBR097W RRP17Q04031 235 aaPredicted RBP1.94□□□□□ -2.1
VPS15YBR097W UTP13Q05946 817 aaKnown RBP1.94□□□□□ -2.1
VPS15YBR097W GIN4Q12263 1142 aa1.94□□□□□ -2.1
VPS15YBR097W MEF1P25039 761 aa1.94□□□□□ -2.1
VPS15YBR097W HEM3P28789 327 aa1.94□□□□□ -2.1
VPS15YBR097W ZUO1P32527 433 aaKnown RBP1.94□□□□□ -2.1
VPS15YBR097W TSR2Q06672 205 aaKnown RBP1.94□□□□□ -2.1
VPS15YBR097W ATP4P05626 244 aa1.94□□□□□ -2.1
VPS15YBR097W TPM1P17536 199 aaKnown RBP1.94□□□□□ -2.1
VPS15YBR097W ACE2P21192 770 aa1.94□□□□□ -2.1
VPS15YBR097W RRP14P36080 434 aaKnown RBP1.94□□□□□ -2.1
VPS15YBR097W SFB2P53953 876 aa1.94□□□□□ -2.1
VPS15YBR097W ECM16Q04217 1267 aaKnown RBP1.94□□□□□ -2.1
VPS15YBR097W YPR097WQ06839 1073 aa1.94□□□□□ -2.1
VPS15YBR097W SFI1Q12369 946 aa1.94□□□□□ -2.1
VPS15YBR097W DRS2P39524 1355 aa1.94□□□□□ -2.1
VPS15YBR097W BCK1Q01389 1478 aa1.94□□□□□ -2.1
VPS15YBR097W CLC1P17891 233 aa1.94□□□□□ -2.1
VPS15YBR097W LTV1P34078 463 aa1.94□□□□□ -2.1
VPS15YBR097W DSF2P38213 736 aa1.94□□□□□ -2.1
VPS15YBR097W BFR1P38934 470 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
VPS15YBR097W PTP3P40048 928 aa1.94□□□□□ -2.1
VPS15YBR097W DJP1P40564 432 aa1.94□□□□□ -2.1
VPS15YBR097W TIM54P47045 478 aa1.94□□□□□ -2.1
VPS15YBR097W TAN1P53072 289 aaPredicted RBP1.94□□□□□ -2.1
VPS15YBR097W TAF2P23255 1407 aa1.93□□□□□ -2.1
VPS15YBR097W CDC11P32458 415 aa1.93□□□□□ -2.1
VPS15YBR097W YTA7P40340 1379 aa1.93□□□□□ -2.1
VPS15YBR097W SDA1P53313 767 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W JJJ1P53863 590 aa1.93□□□□□ -2.1
VPS15YBR097W CTR9P89105 1077 aa1.93□□□□□ -2.1
VPS15YBR097W PUF6Q04373 656 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W ESF1Q06344 628 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W CLF1Q12309 687 aaPredicted RBP1.93□□□□□ -2.1
VPS15YBR097W PWP2P25635 923 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W RPC19P28000 142 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W MNR2P35724 969 aa1.93□□□□□ -2.1
VPS15YBR097W STU1P38198 1513 aa1.93□□□□□ -2.1
VPS15YBR097W SWI6P09959 803 aa1.93□□□□□ -2.1
VPS15YBR097W KAR2P16474 682 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W PET123P17558 318 aa1.93□□□□□ -2.1
VPS15YBR097W PRP45P28004 379 aaPredicted RBP1.93□□□□□ -2.1
VPS15YBR097W YPP1P46951 817 aa1.93□□□□□ -2.1
VPS15YBR097W LSG1P53145 640 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W RUD3Q12234 484 aaKnown RBP1.93□□□□□ -2.1
VPS15YBR097W NKP1Q12493 238 aa1.93□□□□□ -2.1
VPS15YBR097W TY1B-HO13535 1793 aa1.93□□□□□ -2.1
VPS15YBR097W TY1B-DR5P0C2I2 1755 aa1.93□□□□□ -2.1
VPS15YBR097W TY1B-DR6P0C2I3 1755 aa1.93□□□□□ -2.1
VPS15YBR097W TY1B-LR2P0C2I5 1755 aa1.93□□□□□ -2.1
VPS15YBR097W TY1B-LR3P0C2I6 1755 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms