RNA–Protein interactions for RNA: snR57

snR57, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR57, Length 88 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR57	snR57	CSR2	Q12734	1121 aa		4.97	□□□□□ -1.61
snR57	snR57	SEC39	Q12745	709 aa		4.97	□□□□□ -1.61
snR57	snR57	MET17	P06106	444 aa		4.96	□□□□□ -1.62
snR57	snR57	PRP2	P20095	876 aa	Predicted RBP	4.96	□□□□□ -1.62
snR57	snR57	VPS17	P32913	551 aa		4.96	□□□□□ -1.62
snR57	snR57	YTA12	P40341	825 aa		4.96	□□□□□ -1.62
snR57	snR57	YJR154W	P47181	346 aa		4.96	□□□□□ -1.62
snR57	snR57	YGL082W	P53155	381 aa		4.96	□□□□□ -1.62
snR57	snR57	TWF1	P53250	332 aa		4.96	□□□□□ -1.62
snR57	snR57	TAF11	Q04226	346 aa		4.96	□□□□□ -1.62
snR57	snR57	MRD1	Q06106	887 aa	Known RBP	4.96	□□□□□ -1.62
snR57	snR57	YEH2	Q07950	538 aa		4.96	□□□□□ -1.62
snR57	snR57	THP1	Q08231	455 aa		4.96	□□□□□ -1.62
snR57	snR57	RIM20	Q12033	661 aa		4.96	□□□□□ -1.62
snR57	snR57	RAD52	P06778	471 aa	Known RBP	4.95	□□□□□ -1.62
snR57	snR57	PMS1	P14242	873 aa		4.95	□□□□□ -1.62
snR57	snR57	ROX1	P25042	368 aa		4.95	□□□□□ -1.62
snR57	snR57	ECM15	P35195	104 aa		4.95	□□□□□ -1.62
snR57	snR57	STB2	P46679	850 aa		4.95	□□□□□ -1.62
snR57	snR57	ATG29	Q12092	213 aa		4.95	□□□□□ -1.62
snR57	snR57	YDL007C-A	Q2V2Q0	85 aa		4.95	□□□□□ -1.62
snR57	snR57	SEC1	P30619	724 aa	Known RBP	4.94	□□□□□ -1.62
snR57	snR57	GPI10	P30777	616 aa		4.94	□□□□□ -1.62
snR57	snR57	CMC1	P36064	111 aa		4.94	□□□□□ -1.62
snR57	snR57	RIM2	P38127	377 aa		4.94	□□□□□ -1.62
snR57	snR57	TIF4631	P39935	952 aa	Known RBP	4.94	□□□□□ -1.62
snR57	snR57	CSM2	P40465	213 aa		4.94	□□□□□ -1.62
snR57	snR57	RBA50	Q04418	439 aa		4.94	□□□□□ -1.62
snR57	snR57	GRX6	Q12438	231 aa		4.94	□□□□□ -1.62
snR57	snR57	SUC2	P00724	532 aa		4.93	□□□□□ -1.62
snR57	snR57	SEC62	P21825	274 aa		4.93	□□□□□ -1.62
snR57	snR57	SEC66	P33754	206 aa		4.93	□□□□□ -1.62
snR57	snR57	YNK1	P36010	153 aa	Known RBP	4.93	□□□□□ -1.62
snR57	snR57	DUG2	P38149	878 aa		4.93	□□□□□ -1.62
snR57	snR57	BNA4	P38169	460 aa		4.93	□□□□□ -1.62
snR57	snR57	TCM62	P38228	572 aa	Known RBP	4.93	□□□□□ -1.62
snR57	snR57	YJL068C	P40363	299 aa		4.93	□□□□□ -1.62
snR57	snR57	DIM1	P41819	318 aa	Known RBP	4.93	□□□□□ -1.62
snR57	snR57	HEF3	P53978	1044 aa	Known RBP	4.93	□□□□□ -1.62
snR57	snR57	COR1	P07256	457 aa		4.92	□□□□□ -1.62
snR57	snR57	RED1	P14291	827 aa		4.92	□□□□□ -1.62
snR57	snR57	APE1	P14904	514 aa		4.92	□□□□□ -1.62
snR57	snR57	PMT1	P33775	817 aa		4.92	□□□□□ -1.62
snR57	snR57	SMF1	P38925	575 aa		4.92	□□□□□ -1.62
snR57	snR57	MBB1	P39534	108 aa		4.92	□□□□□ -1.62
snR57	snR57	NOC2	P39744	710 aa	Known RBP	4.92	□□□□□ -1.62
snR57	snR57	CAF130	P53280	1122 aa	Predicted RBP	4.92	□□□□□ -1.62
snR57	snR57	PDS5	Q04264	1277 aa		4.92	□□□□□ -1.62
snR57	snR57	YMR087W	Q04299	284 aa		4.92	□□□□□ -1.62
snR57	snR57	YLR287C	Q05881	355 aa		4.92	□□□□□ -1.62
snR57	snR57	RPL31B	P0C2H9	113 aa	Known RBP	4.91	□□□□□ -1.62
snR57	snR57	PPZ1	P26570	692 aa		4.91	□□□□□ -1.62
snR57	snR57	NPL6	P32832	435 aa		4.91	□□□□□ -1.62
snR57	snR57	MSN2	P33748	704 aa		4.91	□□□□□ -1.62
snR57	snR57	OSH3	P38713	996 aa	Known RBP	4.91	□□□□□ -1.62
snR57	snR57	RTT107	P38850	1070 aa		4.91	□□□□□ -1.62
snR57	snR57	YJL070C	P40361	888 aa		4.91	□□□□□ -1.62
snR57	snR57	SYF1	Q04048	859 aa	Predicted RBP	4.91	□□□□□ -1.62
snR57	snR57	RQC1	Q05468	723 aa	Known RBP	4.91	□□□□□ -1.62
snR57	snR57	NRT1	Q08485	598 aa		4.91	□□□□□ -1.62
snR57	snR57	SCM3	Q12334	223 aa		4.91	□□□□□ -1.62
snR57	snR57	BRR1	Q99177	341 aa	Predicted RBP	4.91	□□□□□ -1.62
snR57	snR57	YCR007C	P25354	239 aa		4.9	□□□□□ -1.63
snR57	snR57	ERG3	P32353	365 aa		4.9	□□□□□ -1.63
snR57	snR57	GCS1	P35197	352 aa		4.9	□□□□□ -1.63
snR57	snR57	YAT2	P40017	923 aa		4.9	□□□□□ -1.63
snR57	snR57	HXT14	P42833	540 aa		4.9	□□□□□ -1.63
snR57	snR57	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
snR57	snR57	ZPR1	P53303	486 aa	Known RBP	4.9	□□□□□ -1.63
snR57	snR57	SLD5	Q03406	294 aa		4.9	□□□□□ -1.63
snR57	snR57	IVY1	Q04934	453 aa		4.9	□□□□□ -1.63
snR57	snR57	NDD1	Q08887	554 aa		4.9	□□□□□ -1.63
snR57	snR57	RTN2	Q12443	393 aa		4.9	□□□□□ -1.63
snR57	snR57	RAV1	P47104	1357 aa		4.9	□□□□□ -1.63
snR57	snR57	UTR4	P32626	227 aa		4.89	□□□□□ -1.63
snR57	snR57	SLG1	P54867	378 aa		4.89	□□□□□ -1.63
snR57	snR57	RPM2	Q02773	1202 aa		4.89	□□□□□ -1.63
snR57	snR57	BNA5	Q05979	453 aa		4.89	□□□□□ -1.63
snR57	snR57	DAP1	Q12091	152 aa		4.89	□□□□□ -1.63
snR57	snR57	SFI1	Q12369	946 aa		4.89	□□□□□ -1.63
snR57	snR57	PGA3	Q12746	312 aa	Known RBP	4.89	□□□□□ -1.63
snR57	snR57	YML133C	Q03099	1374 aa		4.89	□□□□□ -1.63
snR57	snR57	YLL067C	Q07888	1374 aa		4.89	□□□□□ -1.63
snR57	snR57	YLL066C	Q99208	1374 aa		4.89	□□□□□ -1.63
snR57	snR57	AMD1	P15274	810 aa	Known RBP	4.88	□□□□□ -1.63
snR57	snR57	SIP2	P34164	415 aa	Known RBP	4.88	□□□□□ -1.63
snR57	snR57	OTU2	P38747	307 aa	Known RBP	4.88	□□□□□ -1.63
snR57	snR57	VPS52	P39904	641 aa		4.88	□□□□□ -1.63
snR57	snR57	MEP2	P41948	499 aa		4.88	□□□□□ -1.63
snR57	snR57	IKS1	P47042	667 aa		4.88	□□□□□ -1.63
snR57	snR57	TAP42	Q04372	366 aa		4.88	□□□□□ -1.63
snR57	snR57	PHO92	Q06390	306 aa		4.88	□□□□□ -1.63
snR57	snR57	SYO1	Q07395	620 aa		4.88	□□□□□ -1.63
snR57	snR57	YUR1	P26725	428 aa		4.87	□□□□□ -1.63
snR57	snR57	GPI1	P53306	609 aa		4.87	□□□□□ -1.63
snR57	snR57	YMR317W	Q04893	1140 aa		4.87	□□□□□ -1.63
snR57	snR57	HCR1	Q05775	265 aa	Known RBP	4.87	□□□□□ -1.63
snR57	snR57	YDL009C	Q12210	107 aa		4.87	□□□□□ -1.63
snR57	snR57	LSP1	Q12230	341 aa	Known RBP	4.87	□□□□□ -1.63
snR57	snR57	CAR1	P00812	333 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms