RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	SAM1	P10659	382 aa	Known RBP	5.97	□□□□□ -1.45
TFB4	YPR056W	PYC1	P11154	1178 aa	Known RBP	5.97	□□□□□ -1.45
TFB4	YPR056W	RDS1	P25611	832 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	RML2	P32611	393 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	YME1	P32795	747 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	PRS1	P32895	427 aa	Known RBP	5.97	□□□□□ -1.45
TFB4	YPR056W	SIC1	P38634	284 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	YIR042C	P40586	236 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	IME4	P41833	600 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	CTK2	P46962	323 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	YDL183C	P48569	320 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	RPT4	P53549	437 aa	Known RBP	5.97	□□□□□ -1.45
TFB4	YPR056W	BUD22	Q04347	519 aa	Known RBP	5.97	□□□□□ -1.45
TFB4	YPR056W	GTO3	Q04806	366 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	SGO1	Q08490	590 aa		5.97	□□□□□ -1.45
TFB4	YPR056W	YPR089W	O13585	888 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	SSA3	P09435	649 aa	Known RBP	5.96	□□□□□ -1.46
TFB4	YPR056W	OSM1	P21375	501 aa	Known RBP	5.96	□□□□□ -1.46
TFB4	YPR056W	GEX1	P25596	615 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	SEC66	P33754	206 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	GEX2	P36173	615 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	SHQ1	P40486	507 aa	Predicted RBP	5.96	□□□□□ -1.46
TFB4	YPR056W	YJL107C	P42947	387 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	YJL163C	P46996	555 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	YJL132W	P47014	750 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	YGR149W	P48236	432 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	MTR3	P48240	250 aa	Predicted RBP	5.96	□□□□□ -1.46
TFB4	YPR056W	FMS1	P50264	508 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	MRK1	P50873	501 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	MND1	P53102	219 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	YGL036W	P53185	909 aa	Predicted RBP	5.96	□□□□□ -1.46
TFB4	YPR056W	RSN1	Q03516	953 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	YLL007C	Q07799	665 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	LOT6	Q07923	191 aa		5.96	□□□□□ -1.46
TFB4	YPR056W	CFT1	Q06632	1357 aa	Known RBP	5.95	□□□□□ -1.46
TFB4	YPR056W	ARD1	P07347	238 aa	Predicted RBP	5.95	□□□□□ -1.46
TFB4	YPR056W	GID7	P25569	745 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	PRE4	P30657	266 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	WBP1	P33767	430 aa	Known RBP	5.95	□□□□□ -1.46
TFB4	YPR056W	TCD2	P36101	447 aa	Known RBP	5.95	□□□□□ -1.46
TFB4	YPR056W	TAE1	P38340	232 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	EFM2	P38347	419 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	STB5	P38699	743 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	YER085C	P40058	173 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	FTR1	P40088	404 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	SCC4	P40090	624 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	GID8	P40208	455 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	GTO1	P48239	356 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	HSH155	P49955	971 aa	Known RBP	5.95	□□□□□ -1.46
TFB4	YPR056W	TIM21	P53220	239 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	YGR117C	P53270	476 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	BOP3	P53958	396 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	UTP6	Q02354	440 aa	Known RBP	5.95	□□□□□ -1.46
TFB4	YPR056W	ACL4	Q03771	387 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	YDR179W-A	Q03983	463 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	PDS5	Q04264	1277 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	RRN11	Q04712	507 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	VPS36	Q06696	566 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	FRE3	Q08905	711 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	YPL272C	Q08984	517 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	AEP3	Q12089	606 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	CMC2	Q3E7A4	109 aa		5.95	□□□□□ -1.46
TFB4	YPR056W	PNO1	Q99216	274 aa	Known RBP	5.95	□□□□□ -1.46
TFB4	YPR056W	UGA1	P17649	471 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	YCR061W	P25639	631 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	PRP45	P28004	379 aa	Predicted RBP	5.94	□□□□□ -1.46
TFB4	YPR056W	PRE2	P30656	287 aa	Known RBP	5.94	□□□□□ -1.46
TFB4	YPR056W	SSE2	P32590	693 aa	Known RBP	5.94	□□□□□ -1.46
TFB4	YPR056W	AGP2	P38090	596 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	YBR259W	P38338	688 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	YHR045W	P38775	560 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	YHR182W	P38870	785 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	ECM1	P39715	212 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	YGL185C	P53100	379 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	STR3	P53101	465 aa	Known RBP	5.94	□□□□□ -1.46
TFB4	YPR056W	GND2	P53319	492 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	COP1	P53622	1201 aa	Known RBP	5.94	□□□□□ -1.46
TFB4	YPR056W	SPO19	Q03029	223 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	SMA2	Q04658	369 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	ASM4	Q05166	528 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	ATG23	Q06671	453 aa		5.94	□□□□□ -1.46
TFB4	YPR056W	YBR085C-A	O43137	85 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	SCH9	P11792	824 aa	Known RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	SRV2	P17555	526 aa	Known RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	SPO7	P18410	259 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	URA4	P20051	364 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	PEX1	P24004	1043 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	YCL068C	P25593	260 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	YCR016W	P25617	290 aa	Known RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	IDH2	P28241	369 aa	Known RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	ARO4	P32449	370 aa	Known RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	YBR139W	P38109	508 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	FAD1	P38913	306 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	MTW1	P39731	289 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	SEC24	P40482	926 aa	Known RBP	5.93	□□□□□ -1.46
TFB4	YPR056W	OTU1	P43558	301 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	NMD5	P46970	1048 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	NET1	P47035	1189 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	YGL114W	P53134	725 aa		5.93	□□□□□ -1.46
TFB4	YPR056W	YGR126W	P53274	230 aa		5.93	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms