RNA–Protein interactions for RNA: YNL335W

DDI3, Transcript of Protein of unknown function, yeast

Gene DDI3, Length 678 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DDI3	YNL335W	GPI10	P30777	616 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	SHP1	P34223	423 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	CMC1	P36064	111 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	MUM2	P38236	366 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TES1	P41903	349 aa	Known RBP	4.25	□□□□□ -1.73
DDI3	YNL335W	LSC1	P53598	329 aa	Known RBP	4.25	□□□□□ -1.73
DDI3	YNL335W	JJJ1	P53863	590 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	RHO4	Q00246	291 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	MSS11	Q03825	758 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	SYF1	Q04048	859 aa	Predicted RBP	4.25	□□□□□ -1.73
DDI3	YNL335W	FMP42	Q04991	504 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	MRD1	Q06106	887 aa	Known RBP	4.25	□□□□□ -1.73
DDI3	YNL335W	DIC1	Q06143	298 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	THP1	Q08231	455 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	NCE102	Q12207	173 aa	RIP-Chip data	4.25	□□□□□ -1.73	not detected
DDI3	YNL335W	SCM3	Q12334	223 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	SEC39	Q12745	709 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-LR1	P0C2J3	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-F	P0CX63	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-GR2	P0CX64	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-C	P25384	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-DR2	Q03494	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY1B-DR1	Q03855	1755 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-OR1	Q12113	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-DR1	Q12472	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY2B-OR2	Q12501	1770 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	TY1B-DR3	Q99231	1755 aa		4.25	□□□□□ -1.73
DDI3	YNL335W	YOR1	P53049	1477 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	PEP4	P07267	405 aa	Known RBP	4.24	□□□□□ -1.73
DDI3	YNL335W	FUR1	P18562	216 aa	Known RBP	4.24	□□□□□ -1.73
DDI3	YNL335W	TRS65	P32893	560 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	YNK1	P36010	153 aa	Known RBP	4.24	□□□□□ -1.73
DDI3	YNL335W	SPC34	P36131	295 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	YIR014W	P40570	242 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	AZF1	P41696	914 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	SAD1	P43589	448 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	STB2	P46679	850 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	ALT2	P52892	507 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	NUP53	Q03790	475 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	PDS5	Q04264	1277 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	GLO2	Q05584	274 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	SFI1	Q12369	946 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	GRX6	Q12438	231 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	RTN2	Q12443	393 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	YDL007C-A	Q2V2Q0	85 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	YML133C	Q03099	1374 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	YLL067C	Q07888	1374 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	YLL066C	Q99208	1374 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	SCC2	Q04002	1493 aa		4.24	□□□□□ -1.73
DDI3	YNL335W	ECM5	Q03214	1411 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	TRM732	Q03496	1420 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	DNA2	P38859	1522 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	RPS2	P25443	254 aa	Known RBP	4.23	□□□□□ -1.73
DDI3	YNL335W	OTU2	P38747	307 aa	Known RBP	4.23	□□□□□ -1.73
DDI3	YNL335W	SMF1	P38925	575 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	ATG27	P46989	271 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	AIM22	P47051	409 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	YJR154W	P47181	346 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	CUL3	P53202	744 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	CAF130	P53280	1122 aa	Predicted RBP	4.23	□□□□□ -1.73
DDI3	YNL335W	BUD32	P53323	261 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	TDA7	P53882	636 aa	Predicted RBP	4.23	□□□□□ -1.73
DDI3	YNL335W	FMP45	Q07651	309 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	YOR365C	Q08844	703 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	CSR2	Q12734	1121 aa		4.23	□□□□□ -1.73
DDI3	YNL335W	COR1	P07256	457 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	PRP2	P20095	876 aa	Predicted RBP	4.22	□□□□□ -1.73
DDI3	YNL335W	ELO2	P25358	347 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	ACH1	P32316	526 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	ERG3	P32353	365 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	ERG1	P32476	496 aa	Known RBP	4.22	□□□□□ -1.73
DDI3	YNL335W	VPS17	P32913	551 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	PMT1	P33775	817 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	BNA4	P38169	460 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	BZZ1	P38822	633 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	HXT14	P42833	540 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	SAM50	P53969	484 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	HEF3	P53978	1044 aa	Known RBP	4.22	□□□□□ -1.73
DDI3	YNL335W	RQC1	Q05468	723 aa	Known RBP	4.22	□□□□□ -1.73
DDI3	YNL335W	YEH2	Q07950	538 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	PDH1	Q12428	516 aa	Known RBP	4.22	□□□□□ -1.73
DDI3	YNL335W	BRR1	Q99177	341 aa	Predicted RBP	4.22	□□□□□ -1.73
DDI3	YNL335W	PEP1	P32319	1579 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	TY2B-B	Q12491	1770 aa		4.22	□□□□□ -1.73
DDI3	YNL335W	RAD52	P06778	471 aa	Known RBP	4.21	□□□□□ -1.74
DDI3	YNL335W	RPL31B	P0C2H9	113 aa	Known RBP	4.21	□□□□□ -1.74
DDI3	YNL335W	BAR1	P12630	587 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	GLN3	P18494	730 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	NPL6	P32832	435 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	MFT1	P33441	392 aa	Known RBP	4.21	□□□□□ -1.74
DDI3	YNL335W	SEC66	P33754	206 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	TIF4631	P39935	952 aa	Known RBP	4.21	□□□□□ -1.74
DDI3	YNL335W	YER130C	P39959	443 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	YTA12	P40341	825 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	GUF1	P46943	645 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	GRS2	Q06817	618 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	THI20	Q08224	551 aa		4.21	□□□□□ -1.74
DDI3	YNL335W	RRG1	Q12167	365 aa	Predicted RBP	4.21	□□□□□ -1.74
DDI3	YNL335W	RAV1	P47104	1357 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 141.4 ms