RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W PSY4P38193 441 aa2.75□□□□□ -1.97
RPF1YHR088W YFL067WP43537 175 aa2.75□□□□□ -1.97
RPF1YHR088W DSD1P53095 428 aa2.75□□□□□ -1.97
RPF1YHR088W BUD32P53323 261 aa2.75□□□□□ -1.97
RPF1YHR088W TMS1Q12116 473 aa2.75□□□□□ -1.97
RPF1YHR088W NCE102Q12207 173 aaRIP-Chip data2.75□□□□□ -1.97not detected
RPF1YHR088W HRT3Q12347 344 aa2.75□□□□□ -1.97
RPF1YHR088W SUC2P00724 532 aa2.74□□□□□ -1.97
RPF1YHR088W APA1P16550 321 aaKnown RBP2.74□□□□□ -1.97
RPF1YHR088W IMG1P25626 169 aa2.74□□□□□ -1.97
RPF1YHR088W SYN8P31377 255 aa2.74□□□□□ -1.97
RPF1YHR088W DBF20P32328 564 aa2.74□□□□□ -1.97
RPF1YHR088W YER010CP40011 234 aa2.74□□□□□ -1.97
RPF1YHR088W SAP185P40856 1058 aa2.74□□□□□ -1.97
RPF1YHR088W GWT1P47026 490 aa2.74□□□□□ -1.97
RPF1YHR088W BNA1P47096 177 aa2.74□□□□□ -1.97
RPF1YHR088W MSC1Q03104 513 aa2.74□□□□□ -1.97
RPF1YHR088W YMR027WQ04371 470 aa2.74□□□□□ -1.97
RPF1YHR088W RIX7Q07844 837 aaKnown RBP2.74□□□□□ -1.97
RPF1YHR088W YOL087CQ99247 1116 aa2.74□□□□□ -1.97
RPF1YHR088W PRE8P23639 250 aa2.73□□□□□ -1.97
RPF1YHR088W CRM1P30822 1084 aaKnown RBP2.73□□□□□ -1.97
RPF1YHR088W SSE2P32590 693 aaKnown RBP2.73□□□□□ -1.97
RPF1YHR088W KAP123P40069 1113 aaKnown RBP2.73□□□□□ -1.97
RPF1YHR088W ALK1P43633 760 aaKnown RBP2.73□□□□□ -1.97
RPF1YHR088W ARC1P46672 376 aaKnown RBP2.73□□□□□ -1.97
RPF1YHR088W TIS11P47977 285 aa2.73□□□□□ -1.97
RPF1YHR088W GPI1P53306 609 aa2.73□□□□□ -1.97
RPF1YHR088W APJ1P53940 528 aa2.73□□□□□ -1.97
RPF1YHR088W MF(ALPHA)1P01149 165 aa2.72□□□□□ -1.97
RPF1YHR088W YBR144CP34215 104 aa2.72□□□□□ -1.97
RPF1YHR088W MDG1P53885 366 aa2.72□□□□□ -1.97
RPF1YHR088W IBD2P53892 351 aa2.72□□□□□ -1.97
RPF1YHR088W RAD52P06778 471 aaKnown RBP2.71□□□□□ -1.98
RPF1YHR088W SLC1P33333 303 aa2.71□□□□□ -1.98
RPF1YHR088W YIL067CP40514 678 aa2.71□□□□□ -1.98
RPF1YHR088W SHY1P53266 389 aa2.71□□□□□ -1.98
RPF1YHR088W PHO92Q06390 306 aa2.71□□□□□ -1.98
RPF1YHR088W BRR1Q99177 341 aaPredicted RBP2.71□□□□□ -1.98
RPF1YHR088W CLN3P13365 580 aa2.7□□□□□ -1.98
RPF1YHR088W RVS161P25343 265 aaKnown RBP2.7□□□□□ -1.98
RPF1YHR088W MFT1P33441 392 aaKnown RBP2.7□□□□□ -1.98
RPF1YHR088W SHP1P34223 423 aa2.7□□□□□ -1.98
RPF1YHR088W SWD3P38123 315 aa2.7□□□□□ -1.98
RPF1YHR088W SIP4P46954 829 aa2.7□□□□□ -1.98
RPF1YHR088W DRN1P53255 507 aaKnown RBP2.7□□□□□ -1.98
RPF1YHR088W PIR3Q03180 325 aa2.7□□□□□ -1.98
RPF1YHR088W BUD22Q04347 519 aaKnown RBP2.7□□□□□ -1.98
RPF1YHR088W RBS1Q05672 457 aaKnown RBP2.7□□□□□ -1.98
RPF1YHR088W YDL057WQ07379 328 aa2.7□□□□□ -1.98
RPF1YHR088W YPL272CQ08984 517 aa2.7□□□□□ -1.98
RPF1YHR088W PEP4P07267 405 aaKnown RBP2.69□□□□□ -1.98
RPF1YHR088W KGD1P20967 1014 aaKnown RBP2.69□□□□□ -1.98
RPF1YHR088W DUG2P38149 878 aa2.69□□□□□ -1.98
RPF1YHR088W TMA108P40462 946 aa2.69□□□□□ -1.98
RPF1YHR088W OGG1P53397 376 aaPredicted RBP2.69□□□□□ -1.98
RPF1YHR088W SNO4Q04902 237 aa2.69□□□□□ -1.98
RPF1YHR088W HSP33Q08914 237 aaKnown RBP2.69□□□□□ -1.98
RPF1YHR088W HSP32Q08992 237 aa2.69□□□□□ -1.98
RPF1YHR088W YLR108CQ12259 485 aa2.69□□□□□ -1.98
RPF1YHR088W RBD2Q12270 262 aa2.69□□□□□ -1.98
RPF1YHR088W HSH49Q99181 213 aaPredicted RBP2.69□□□□□ -1.98
RPF1YHR088W ARD1P07347 238 aaPredicted RBP2.68□□□□□ -1.98
RPF1YHR088W CDC24P11433 854 aaPredicted RBP2.68□□□□□ -1.98
RPF1YHR088W GLK1P17709 500 aaKnown RBP2.68□□□□□ -1.98
RPF1YHR088W CPR4P25334 318 aa2.68□□□□□ -1.98
RPF1YHR088W YIH1P25637 258 aa2.68□□□□□ -1.98
RPF1YHR088W RSM22P36056 628 aa2.68□□□□□ -1.98
RPF1YHR088W AUR1P36107 401 aaPredicted RBP2.68□□□□□ -1.98
RPF1YHR088W MAL33P38157 468 aa2.68□□□□□ -1.98
RPF1YHR088W YGR021WP53212 290 aa2.68□□□□□ -1.98
RPF1YHR088W LUC7Q07508 261 aaPredicted RBP2.68□□□□□ -1.98
RPF1YHR088W FMP40Q08968 688 aaPredicted RBP2.68□□□□□ -1.98
RPF1YHR088W NDI1P32340 513 aa2.67□□□□□ -1.98
RPF1YHR088W HCS1P34243 683 aa2.67□□□□□ -1.98
RPF1YHR088W NAT2P37293 288 aa2.67□□□□□ -1.98
RPF1YHR088W FAU1P40099 211 aa2.67□□□□□ -1.98
RPF1YHR088W TOF2Q02208 771 aa2.67□□□□□ -1.98
RPF1YHR088W TSR1Q07381 788 aaKnown RBP2.67□□□□□ -1.98
RPF1YHR088W KEL3Q08979 651 aaPredicted RBP2.67□□□□□ -1.98
RPF1YHR088W WTM1Q12363 437 aaKnown RBP2.67□□□□□ -1.98
RPF1YHR088W ADH2P00331 348 aaKnown RBP2.66□□□□□ -1.98
RPF1YHR088W PET123P17558 318 aa2.66□□□□□ -1.98
RPF1YHR088W ART10P18634 518 aaKnown RBP2.66□□□□□ -1.98
RPF1YHR088W CDC60P26637 1090 aaKnown RBP2.66□□□□□ -1.98
RPF1YHR088W BNA4P38169 460 aa2.66□□□□□ -1.98
RPF1YHR088W URB2P47108 1174 aa2.66□□□□□ -1.98
RPF1YHR088W LYS4P49367 693 aaPredicted RBP2.66□□□□□ -1.98
RPF1YHR088W BSC5P53755 489 aa2.66□□□□□ -1.98
RPF1YHR088W TOF1P53840 1238 aa2.66□□□□□ -1.98
RPF1YHR088W GTR1Q00582 310 aa2.66□□□□□ -1.98
RPF1YHR088W MRPL35Q06678 367 aa2.66□□□□□ -1.98
RPF1YHR088W THP1Q08231 455 aa2.66□□□□□ -1.98
RPF1YHR088W CFT2Q12102 859 aaPredicted RBP2.66□□□□□ -1.98
RPF1YHR088W SKM1Q12469 655 aa2.66□□□□□ -1.98
RPF1YHR088W CHS1P08004 1131 aa2.65□□□□□ -1.99
RPF1YHR088W FUM1P08417 488 aaKnown RBP2.65□□□□□ -1.99
RPF1YHR088W PAP1P29468 568 aaKnown RBP2.65□□□□□ -1.99
RPF1YHR088W MID2P36027 376 aa2.65□□□□□ -1.99
RPF1YHR088W TCM62P38228 572 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms