RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W COQ3P27680 312 aa2.14□□□□□ -2.07
SNC1YAL030W ERV1P27882 189 aa2.14□□□□□ -2.07
SNC1YAL030W SNC1P31109 117 aa2.14□□□□□ -2.07
SNC1YAL030W SHP1P34223 423 aa2.14□□□□□ -2.07
SNC1YAL030W STV1P37296 890 aa2.14□□□□□ -2.07
SNC1YAL030W ARA1P38115 344 aa2.14□□□□□ -2.07
SNC1YAL030W GDT1P38301 280 aaPredicted RBP2.14□□□□□ -2.07
SNC1YAL030W LAG1P38703 411 aa2.14□□□□□ -2.07
SNC1YAL030W ANS1P38832 159 aa2.14□□□□□ -2.07
SNC1YAL030W SNG1P46950 547 aa2.14□□□□□ -2.07
SNC1YAL030W TAX4P47030 604 aa2.14□□□□□ -2.07
SNC1YAL030W ALT2P52892 507 aa2.14□□□□□ -2.07
SNC1YAL030W YGL138CP53122 345 aa2.14□□□□□ -2.07
SNC1YAL030W CUL3P53202 744 aa2.14□□□□□ -2.07
SNC1YAL030W RPT4P53549 437 aaKnown RBP2.14□□□□□ -2.07
SNC1YAL030W ATP23P53722 227 aa2.14□□□□□ -2.07
SNC1YAL030W EOS1P53938 366 aa2.14□□□□□ -2.07
SNC1YAL030W CTL1Q03220 320 aaKnown RBP2.14□□□□□ -2.07
SNC1YAL030W ACL4Q03771 387 aa2.14□□□□□ -2.07
SNC1YAL030W GYL1Q04322 720 aa2.14□□□□□ -2.07
SNC1YAL030W RSF1Q05043 376 aa2.14□□□□□ -2.07
SNC1YAL030W ORM2Q06144 216 aa2.14□□□□□ -2.07
SNC1YAL030W MMR1Q06324 491 aa2.14□□□□□ -2.07
SNC1YAL030W MCP2Q06567 569 aa2.14□□□□□ -2.07
SNC1YAL030W THP1Q08231 455 aa2.14□□□□□ -2.07
SNC1YAL030W OSW1Q08692 278 aa2.14□□□□□ -2.07
SNC1YAL030W UAF30Q08747 228 aa2.14□□□□□ -2.07
SNC1YAL030W SMF3Q12078 473 aaPredicted RBP2.14□□□□□ -2.07
SNC1YAL030W GPM3Q12326 303 aa2.14□□□□□ -2.07
SNC1YAL030W CTF3Q12748 733 aa2.14□□□□□ -2.07
SNC1YAL030W EDE1P34216 1381 aa2.13□□□□□ -2.07
SNC1YAL030W RIP1P08067 215 aa2.13□□□□□ -2.07
SNC1YAL030W SNF3P10870 884 aa2.13□□□□□ -2.07
SNC1YAL030W PEP5P12868 1029 aa2.13□□□□□ -2.07
SNC1YAL030W VMA2P16140 517 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W TYR1P20049 452 aa2.13□□□□□ -2.07
SNC1YAL030W URA4P20051 364 aa2.13□□□□□ -2.07
SNC1YAL030W RPB8P20436 146 aa2.13□□□□□ -2.07
SNC1YAL030W SGV1P23293 657 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W KRE2P27809 442 aa2.13□□□□□ -2.07
SNC1YAL030W BRF1P29056 596 aa2.13□□□□□ -2.07
SNC1YAL030W AFG1P32317 509 aa2.13□□□□□ -2.07
SNC1YAL030W REC114P32841 428 aa2.13□□□□□ -2.07
SNC1YAL030W HEL1P36113 551 aa2.13□□□□□ -2.07
SNC1YAL030W TCM62P38228 572 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W LEU5P38702 357 aa2.13□□□□□ -2.07
SNC1YAL030W YHR054CP38780 354 aa2.13□□□□□ -2.07
SNC1YAL030W MBB1P39534 108 aa2.13□□□□□ -2.07
SNC1YAL030W TIF4631P39935 952 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W YIL060WP40519 144 aa2.13□□□□□ -2.07
SNC1YAL030W SNO3P43544 222 aa2.13□□□□□ -2.07
SNC1YAL030W NMD5P46970 1048 aa2.13□□□□□ -2.07
SNC1YAL030W ECM27P47144 725 aa2.13□□□□□ -2.07
SNC1YAL030W ATP22P50273 684 aaPredicted RBP2.13□□□□□ -2.07
SNC1YAL030W OCA1P50946 238 aaPredicted RBP2.13□□□□□ -2.07
SNC1YAL030W RMD9P53140 646 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W DRN1P53255 507 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W BTN2P53286 410 aa2.13□□□□□ -2.07
SNC1YAL030W SOL4P53315 255 aa2.13□□□□□ -2.07
SNC1YAL030W SMM1P53720 384 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W IDP3P53982 420 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W MEH1Q02205 184 aa2.13□□□□□ -2.07
SNC1YAL030W SMA1Q02651 245 aa2.13□□□□□ -2.07
SNC1YAL030W ECI1Q05871 280 aa2.13□□□□□ -2.07
SNC1YAL030W YDL057WQ07379 328 aa2.13□□□□□ -2.07
SNC1YAL030W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.13□□□□□ -2.07not detected
SNC1YAL030W SIL1Q08199 421 aa2.13□□□□□ -2.07
SNC1YAL030W RKM1Q08961 583 aaPredicted RBP2.13□□□□□ -2.07
SNC1YAL030W PFA4Q12006 378 aa2.13□□□□□ -2.07
SNC1YAL030W CFT2Q12102 859 aaPredicted RBP2.13□□□□□ -2.07
SNC1YAL030W VAM3Q12241 283 aa2.13□□□□□ -2.07
SNC1YAL030W RPN5Q12250 445 aaKnown RBP2.13□□□□□ -2.07
SNC1YAL030W RRI1Q12468 440 aa2.13□□□□□ -2.07
SNC1YAL030W PGK1P00560 416 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W SUC2P00724 532 aa2.12□□□□□ -2.07
SNC1YAL030W YML002WP0CF17 737 aa2.12□□□□□ -2.07
SNC1YAL030W RPL1AP0CX43 217 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W RPL1BP0CX44 217 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W URE2P23202 354 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W YCR007CP25354 239 aa2.12□□□□□ -2.07
SNC1YAL030W GEX1P25596 615 aa2.12□□□□□ -2.07
SNC1YAL030W MSP1P28737 362 aa2.12□□□□□ -2.07
SNC1YAL030W MCM4P30665 933 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W SIN4P32259 974 aa2.12□□□□□ -2.07
SNC1YAL030W DPH2P32461 534 aa2.12□□□□□ -2.07
SNC1YAL030W PPZ2P33329 710 aa2.12□□□□□ -2.07
SNC1YAL030W MSN2P33748 704 aa2.12□□□□□ -2.07
SNC1YAL030W UIP5P36137 443 aa2.12□□□□□ -2.07
SNC1YAL030W DAD2P36162 133 aa2.12□□□□□ -2.07
SNC1YAL030W DUG2P38149 878 aa2.12□□□□□ -2.07
SNC1YAL030W BNA4P38169 460 aa2.12□□□□□ -2.07
SNC1YAL030W MMS4P38257 691 aa2.12□□□□□ -2.07
SNC1YAL030W EFM2P38347 419 aa2.12□□□□□ -2.07
SNC1YAL030W YMR147WP40218 223 aaKnown RBP2.12□□□□□ -2.07
SNC1YAL030W EFM4P40516 257 aa2.12□□□□□ -2.07
SNC1YAL030W CFD1P40558 293 aa2.12□□□□□ -2.07
SNC1YAL030W HXT9P40885 567 aa2.12□□□□□ -2.07
SNC1YAL030W TFG2P41896 400 aaPredicted RBP2.12□□□□□ -2.07
SNC1YAL030W YJL132WP47014 750 aa2.12□□□□□ -2.07
SNC1YAL030W MLC1P53141 149 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms