RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 SKN1P33336 771 aa2.54□□□□□ -2
snR43snR43 LST4P34239 828 aa2.54□□□□□ -2
snR43snR43 PSY4P38193 441 aa2.54□□□□□ -2
snR43snR43 DED81P38707 554 aaKnown RBP2.54□□□□□ -2
snR43snR43 DBP8P38719 431 aa2.54□□□□□ -2
snR43snR43 MTG2P38860 518 aa2.54□□□□□ -2
snR43snR43 PMC1P38929 1173 aaPredicted RBP2.54□□□□□ -2
snR43snR43 LRO1P40345 661 aa2.54□□□□□ -2
snR43snR43 ALK1P43633 760 aaKnown RBP2.54□□□□□ -2
snR43snR43 IKS1P47042 667 aa2.54□□□□□ -2
snR43snR43 HLJ1P48353 224 aa2.54□□□□□ -2
snR43snR43 ASK10P48361 1146 aa2.54□□□□□ -2
snR43snR43 MAL11P53048 616 aa2.54□□□□□ -2
snR43snR43 PBP1P53297 722 aaKnown RBP2.54□□□□□ -2
snR43snR43 RNH70P53331 553 aa2.54□□□□□ -2
snR43snR43 MET14Q02196 202 aa2.54□□□□□ -2
snR43snR43 PEX25Q02969 394 aa2.54□□□□□ -2
snR43snR43 EMI1Q04406 187 aa2.54□□□□□ -2
snR43snR43 ENT2Q05785 613 aa2.54□□□□□ -2
snR43snR43 YLR224WQ05947 369 aa2.54□□□□□ -2
snR43snR43 ADY3Q07732 790 aa2.54□□□□□ -2
snR43snR43 LDB18Q07887 179 aa2.54□□□□□ -2
snR43snR43 TMA16Q08687 178 aa2.54□□□□□ -2
snR43snR43 TGL5Q12043 749 aa2.54□□□□□ -2
snR43snR43 RRP6Q12149 733 aaKnown RBP2.54□□□□□ -2
snR43snR43 LSP1Q12230 341 aaKnown RBP2.54□□□□□ -2
snR43snR43 RRP12Q12754 1228 aaKnown RBP2.54□□□□□ -2
snR43snR43 SEY1Q99287 776 aa2.54□□□□□ -2
snR43snR43 CPA1P07258 411 aaKnown RBP2.53□□□□□ -2
snR43snR43 PCT1P13259 424 aa2.53□□□□□ -2
snR43snR43 PRP2P20095 876 aaPredicted RBP2.53□□□□□ -2
snR43snR43 CLN1P20437 546 aa2.53□□□□□ -2
snR43snR43 VPS34P22543 875 aa2.53□□□□□ -2
snR43snR43 ADH7P25377 361 aa2.53□□□□□ -2
snR43snR43 IMG1P25626 169 aa2.53□□□□□ -2
snR43snR43 PLC1P32383 869 aa2.53□□□□□ -2
snR43snR43 HXT3P32466 567 aaKnown RBP2.53□□□□□ -2
snR43snR43 HOG1P32485 435 aa2.53□□□□□ -2
snR43snR43 NRP1P32770 719 aaKnown RBP RIP-Chip data2.53□□□□□ -2not detected
snR43snR43 MRS6P32864 603 aaKnown RBP2.53□□□□□ -2
snR43snR43 YKR078WP36158 585 aaKnown RBP2.53□□□□□ -2
snR43snR43 YHR033WP38690 423 aa2.53□□□□□ -2
snR43snR43 MSS4P38994 779 aa2.53□□□□□ -2
snR43snR43 LYS1P38998 373 aaRIP-Chip data2.53□□□□□ -2 RIP-Chip
snR43snR43 DSS1P39112 969 aa2.53□□□□□ -2
snR43snR43 VFA1P40080 203 aa2.53□□□□□ -2
snR43snR43 ROK1P45818 564 aaPredicted RBP2.53□□□□□ -2
snR43snR43 MET12P46151 657 aa2.53□□□□□ -2
snR43snR43 TY4A-JP47023 414 aa2.53□□□□□ -2
snR43snR43 PHO23P50947 330 aa2.53□□□□□ -2
snR43snR43 YGL260WP53056 76 aa2.53□□□□□ -2
snR43snR43 YGR127WP53275 312 aa2.53□□□□□ -2
snR43snR43 FRE4P53746 719 aa2.53□□□□□ -2
snR43snR43 NGL3Q03210 505 aa2.53□□□□□ -2
snR43snR43 CCE1Q03702 353 aa2.53□□□□□ -2
snR43snR43 THI7Q05998 598 aa2.53□□□□□ -2
snR43snR43 FMP45Q07651 309 aa2.53□□□□□ -2
snR43snR43 BUD7Q08754 746 aa2.53□□□□□ -2
snR43snR43 NEW1Q08972 1196 aaKnown RBP2.53□□□□□ -2
snR43snR43 PFA4Q12006 378 aa2.53□□□□□ -2
snR43snR43 DIN7Q12086 430 aa2.53□□□□□ -2
snR43snR43 HAL9Q12180 1030 aa2.53□□□□□ -2
snR43snR43 NPC2Q12408 173 aa2.53□□□□□ -2
snR43snR43 YLR149CQ99296 730 aa2.53□□□□□ -2
snR43snR43 URA4P20051 364 aa2.52□□□□□ -2.01
snR43snR43 SFL1P20134 766 aa2.52□□□□□ -2.01
snR43snR43 YSP3P25036 478 aa2.52□□□□□ -2.01
snR43snR43 DCC1P25559 380 aa2.52□□□□□ -2.01
snR43snR43 MSH1P25846 959 aa2.52□□□□□ -2.01
snR43snR43 MEI4P29467 408 aa2.52□□□□□ -2.01
snR43snR43 GDA1P32621 518 aa2.52□□□□□ -2.01
snR43snR43 RAD5P32849 1169 aaPredicted RBP2.52□□□□□ -2.01
snR43snR43 EMC3P36039 253 aa2.52□□□□□ -2.01
snR43snR43 NTR2P36118 322 aaPredicted RBP2.52□□□□□ -2.01
snR43snR43 SHM2P37291 469 aaKnown RBP2.52□□□□□ -2.01
snR43snR43 CTP1P38152 299 aa2.52□□□□□ -2.01
snR43snR43 YBR259WP38338 688 aa2.52□□□□□ -2.01
snR43snR43 OTU2P38747 307 aaKnown RBP2.52□□□□□ -2.01
snR43snR43 PCL5P38794 229 aa2.52□□□□□ -2.01
snR43snR43 YEL073CP39974 107 aa2.52□□□□□ -2.01
snR43snR43 YAT2P40017 923 aa2.52□□□□□ -2.01
snR43snR43 KHA1P40309 873 aa2.52□□□□□ -2.01
snR43snR43 ARG2P40360 574 aa2.52□□□□□ -2.01
snR43snR43 YIL086CP40503 102 aa2.52□□□□□ -2.01
snR43snR43 YJL107CP42947 387 aa2.52□□□□□ -2.01
snR43snR43 NIT3P49954 291 aa2.52□□□□□ -2.01
snR43snR43 SAP4P53036 818 aa2.52□□□□□ -2.01
snR43snR43 YGR021WP53212 290 aa2.52□□□□□ -2.01
snR43snR43 NNF2P53253 936 aa2.52□□□□□ -2.01
snR43snR43 TIM13P53299 105 aa2.52□□□□□ -2.01
snR43snR43 ZRG17P53735 605 aa2.52□□□□□ -2.01
snR43snR43 CDC14Q00684 551 aa2.52□□□□□ -2.01
snR43snR43 REG1Q00816 1014 aa2.52□□□□□ -2.01
snR43snR43 YKR011CQ02209 353 aa2.52□□□□□ -2.01
snR43snR43 NUP100Q02629 959 aa2.52□□□□□ -2.01
snR43snR43 ATG16Q03818 150 aa2.52□□□□□ -2.01
snR43snR43 GSF2Q04697 403 aaKnown RBP2.52□□□□□ -2.01
snR43snR43 IVY1Q04934 453 aa2.52□□□□□ -2.01
snR43snR43 ARP9Q05123 467 aa2.52□□□□□ -2.01
snR43snR43 CRR1Q05790 422 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms