RNA–Protein interactions for RNA: YPR047W

MSF1, Transcript of Mitochondrial phenylalanyl-tRNA synthetase, yeastyeast

Gene MSF1, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSF1YPR047W RGA1P39083 1007 aa9.96□□□□□ -0.82
MSF1YPR047W SEC28P40509 296 aaKnown RBP9.96□□□□□ -0.82
MSF1YPR047W TRM9P49957 279 aa9.96□□□□□ -0.82
MSF1YPR047W SLT2Q00772 484 aa9.96□□□□□ -0.82
MSF1YPR047W YMR034CQ05131 434 aaPredicted RBP9.96□□□□□ -0.82
MSF1YPR047W UBX3Q12229 455 aa9.96□□□□□ -0.82
MSF1YPR047W RPS4AP0CX35 261 aaKnown RBP9.95□□□□□ -0.82
MSF1YPR047W RPS4BP0CX36 261 aaKnown RBP9.95□□□□□ -0.82
MSF1YPR047W SEC14P24280 304 aaKnown RBP9.95□□□□□ -0.82
MSF1YPR047W VAC17P25591 423 aa9.95□□□□□ -0.82
MSF1YPR047W PRO1P32264 428 aa9.95□□□□□ -0.82
MSF1YPR047W SFA1P32771 386 aa9.95□□□□□ -0.82
MSF1YPR047W FTH1P38310 465 aa9.95□□□□□ -0.82
MSF1YPR047W MUP3P38734 546 aa9.95□□□□□ -0.82
MSF1YPR047W YIL086CP40503 102 aa9.95□□□□□ -0.82
MSF1YPR047W TIS11P47977 285 aa9.95□□□□□ -0.82
MSF1YPR047W KTR5P53966 522 aaPredicted RBP9.95□□□□□ -0.82
MSF1YPR047W ELP4Q02884 456 aaKnown RBP9.95□□□□□ -0.82
MSF1YPR047W GOT1Q03554 138 aa9.95□□□□□ -0.82
MSF1YPR047W SPO20Q04359 397 aa9.95□□□□□ -0.82
MSF1YPR047W BCH1Q05029 724 aa9.95□□□□□ -0.82
MSF1YPR047W YOL024WQ08172 172 aa9.95□□□□□ -0.82
MSF1YPR047W TRA1P38811 3744 aa9.94□□□□□ -0.82
MSF1YPR047W YRO2P38079 344 aa9.94□□□□□ -0.82
MSF1YPR047W NPT1P39683 429 aaKnown RBP9.94□□□□□ -0.82
MSF1YPR047W NDE1P40215 560 aa9.94□□□□□ -0.82
MSF1YPR047W HOS4P40480 1083 aa9.94□□□□□ -0.82
MSF1YPR047W MAL13P53338 473 aa9.94□□□□□ -0.82
MSF1YPR047W PEX25Q02969 394 aa9.94□□□□□ -0.82
MSF1YPR047W NHP10Q03435 203 aa9.94□□□□□ -0.82
MSF1YPR047W ENT2Q05785 613 aa9.94□□□□□ -0.82
MSF1YPR047W YLR177WQ06251 628 aa9.94□□□□□ -0.82
MSF1YPR047W HAL9Q12180 1030 aa9.94□□□□□ -0.82
MSF1YPR047W PTM1P32857 523 aa9.93□□□□□ -0.82
MSF1YPR047W YKL100CP34248 587 aa9.93□□□□□ -0.82
MSF1YPR047W YHR210CP38893 341 aa9.93□□□□□ -0.82
MSF1YPR047W MDM34P53083 459 aa9.93□□□□□ -0.82
MSF1YPR047W TAF12Q03761 539 aa9.93□□□□□ -0.82
MSF1YPR047W YET3Q07451 203 aa9.93□□□□□ -0.82
MSF1YPR047W YMR030W-AQ3E760 96 aa9.93□□□□□ -0.82
MSF1YPR047W URA4P20051 364 aa9.92□□□□□ -0.82
MSF1YPR047W RPB4P20433 221 aaPredicted RBP9.92□□□□□ -0.82
MSF1YPR047W LYP1P32487 611 aa9.92□□□□□ -0.82
MSF1YPR047W CYM1P32898 989 aa9.92□□□□□ -0.82
MSF1YPR047W ETR1P38071 380 aa9.92□□□□□ -0.82
MSF1YPR047W YJR030CP47101 745 aa9.92□□□□□ -0.82
MSF1YPR047W IBA57P47158 497 aa9.92□□□□□ -0.82
MSF1YPR047W YGR250CP53316 781 aaKnown RBP9.92□□□□□ -0.82
MSF1YPR047W SED5Q01590 340 aa9.92□□□□□ -0.82
MSF1YPR047W MSL5Q12186 476 aaKnown RBP RIP-Chip data9.92□□□□□ -0.82not detected
MSF1YPR047W YPL066WQ12194 479 aa9.92□□□□□ -0.82
MSF1YPR047W HSP42Q12329 375 aa9.92□□□□□ -0.82
MSF1YPR047W BRR1Q99177 341 aaPredicted RBP9.92□□□□□ -0.82
MSF1YPR047W AMD2P22580 549 aa9.91□□□□□ -0.82
MSF1YPR047W CCT2P39076 527 aaKnown RBP9.91□□□□□ -0.82
MSF1YPR047W GCD14P46959 383 aaPredicted RBP9.91□□□□□ -0.82
MSF1YPR047W HPT1Q04178 221 aaKnown RBP9.91□□□□□ -0.82
MSF1YPR047W ROY1Q04847 553 aa9.91□□□□□ -0.82
MSF1YPR047W PNP1Q05788 311 aa9.91□□□□□ -0.82
MSF1YPR047W GIC2Q06648 383 aa9.91□□□□□ -0.82
MSF1YPR047W VAM6Q07468 1049 aa9.91□□□□□ -0.82
MSF1YPR047W RRP42Q12277 265 aaPredicted RBP9.91□□□□□ -0.82
MSF1YPR047W RGT2Q12300 763 aa9.91□□□□□ -0.82
MSF1YPR047W CDC8P00572 216 aa9.9□□□□□ -0.82
MSF1YPR047W IPP1P00817 287 aaKnown RBP9.9□□□□□ -0.82
MSF1YPR047W STE3P06783 470 aa9.9□□□□□ -0.82
MSF1YPR047W AGP1P25376 633 aa9.9□□□□□ -0.82
MSF1YPR047W SRB5P32585 307 aa9.9□□□□□ -0.82
MSF1YPR047W SDH3P33421 198 aa9.9□□□□□ -0.82
MSF1YPR047W LAS1P36146 502 aaPredicted RBP9.9□□□□□ -0.82
MSF1YPR047W CTP1P38152 299 aa9.9□□□□□ -0.82
MSF1YPR047W MNL1P38888 796 aa9.9□□□□□ -0.82
MSF1YPR047W AXL2P38928 823 aa9.9□□□□□ -0.82
MSF1YPR047W GGC1P38988 300 aa9.9□□□□□ -0.82
MSF1YPR047W DHH1P39517 506 aaKnown RBP9.9□□□□□ -0.82
MSF1YPR047W STB2P46679 850 aa9.9□□□□□ -0.82
MSF1YPR047W IKS1P47042 667 aa9.9□□□□□ -0.82
MSF1YPR047W KXD1P53158 218 aa9.9□□□□□ -0.82
MSF1YPR047W SHR3Q02774 210 aa9.9□□□□□ -0.82
MSF1YPR047W TEN1Q07921 160 aa9.9□□□□□ -0.82
MSF1YPR047W MDY2Q12285 212 aa9.9□□□□□ -0.82
MSF1YPR047W SRN2Q99176 213 aa9.9□□□□□ -0.82
MSF1YPR047W NOP14Q99207 810 aaKnown RBP9.9□□□□□ -0.82
MSF1YPR047W PRP6P19735 899 aaPredicted RBP9.9□□□□□ -0.83
MSF1YPR047W MRPL25P23369 157 aa9.9□□□□□ -0.83
MSF1YPR047W ADE1P27616 306 aa9.9□□□□□ -0.83
MSF1YPR047W RRN10P38204 145 aa9.9□□□□□ -0.83
MSF1YPR047W SSP120P39931 234 aaKnown RBP9.9□□□□□ -0.83
MSF1YPR047W TFG1P41895 735 aaPredicted RBP9.9□□□□□ -0.83
MSF1YPR047W YNR021WP53723 404 aaKnown RBP9.9□□□□□ -0.83
MSF1YPR047W MRS2Q01926 470 aa9.9□□□□□ -0.83
MSF1YPR047W BUD22Q04347 519 aaKnown RBP9.9□□□□□ -0.83
MSF1YPR047W MCA1Q08601 432 aa9.9□□□□□ -0.83
MSF1YPR047W YPR022CQ12139 1133 aa9.9□□□□□ -0.83
MSF1YPR047W KCS1Q12494 1050 aa9.9□□□□□ -0.83
MSF1YPR047W TY4A-HQ6Q5P6 413 aa9.9□□□□□ -0.83
MSF1YPR047W MEC1P38111 2368 aa9.89□□□□□ -0.83
MSF1YPR047W GCY1P14065 312 aaKnown RBP RIP-Chip data9.89□□□□□ -0.83not detected
MSF1YPR047W AAD3P25612 363 aa9.89□□□□□ -0.83
MSF1YPR047W SPP381P38282 291 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms