RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W ART10P18634 518 aaKnown RBP4.79□□□□□ -1.64
VPS28YPL065W MTR2P34232 184 aaKnown RBP4.79□□□□□ -1.64
VPS28YPL065W RPL32P38061 130 aaKnown RBP4.79□□□□□ -1.64
VPS28YPL065W UBA4P38820 440 aa4.79□□□□□ -1.64
VPS28YPL065W YMR317WQ04893 1140 aa4.79□□□□□ -1.64
VPS28YPL065W ECI1Q05871 280 aa4.79□□□□□ -1.64
VPS28YPL065W YLR287CQ05881 355 aa4.79□□□□□ -1.64
VPS28YPL065W ROX1P25042 368 aa4.78□□□□□ -1.64
VPS28YPL065W BUD5P25300 642 aaPredicted RBP4.78□□□□□ -1.64
VPS28YPL065W PPZ1P26570 692 aa4.78□□□□□ -1.64
VPS28YPL065W YKL100CP34248 587 aa4.78□□□□□ -1.64
VPS28YPL065W YNL234WP53857 426 aa4.78□□□□□ -1.64
VPS28YPL065W YDR239CQ03780 787 aa4.78□□□□□ -1.64
VPS28YPL065W SYF1Q04048 859 aaPredicted RBP4.78□□□□□ -1.64
VPS28YPL065W AVL9Q12500 764 aa4.78□□□□□ -1.64
VPS28YPL065W RED1P14291 827 aa4.77□□□□□ -1.65
VPS28YPL065W GPI10P30777 616 aa4.77□□□□□ -1.65
VPS28YPL065W WBP1P33767 430 aaKnown RBP4.77□□□□□ -1.65
VPS28YPL065W ROT2P38138 954 aa4.77□□□□□ -1.65
VPS28YPL065W MET18P40469 1032 aa4.77□□□□□ -1.65
VPS28YPL065W PET130P47065 347 aa4.77□□□□□ -1.65
VPS28YPL065W PYK2P52489 506 aaKnown RBP4.77□□□□□ -1.65
VPS28YPL065W DIG1Q03063 452 aaKnown RBP4.77□□□□□ -1.65
VPS28YPL065W CTL1Q03220 320 aaKnown RBP4.77□□□□□ -1.65
VPS28YPL065W EKI1Q03764 534 aa4.77□□□□□ -1.65
VPS28YPL065W FMP42Q04991 504 aa4.77□□□□□ -1.65
VPS28YPL065W COQ9Q05779 260 aa4.77□□□□□ -1.65
VPS28YPL065W ETT1Q08421 412 aaKnown RBP4.77□□□□□ -1.65
VPS28YPL065W RDR1Q08904 546 aa4.77□□□□□ -1.65
VPS28YPL065W ELO2P25358 347 aa4.76□□□□□ -1.65
VPS28YPL065W PHO90P39535 881 aa4.76□□□□□ -1.65
VPS28YPL065W SOL4P53315 255 aa4.76□□□□□ -1.65
VPS28YPL065W ESBP6P53918 673 aa4.76□□□□□ -1.65
VPS28YPL065W PGA3Q12746 312 aaKnown RBP4.76□□□□□ -1.65
VPS28YPL065W ERG3P32353 365 aa4.75□□□□□ -1.65
VPS28YPL065W PDR3P33200 976 aa4.75□□□□□ -1.65
VPS28YPL065W FMP46P36141 133 aaKnown RBP4.75□□□□□ -1.65
VPS28YPL065W CST26P38226 397 aa4.75□□□□□ -1.65
VPS28YPL065W BZZ1P38822 633 aa4.75□□□□□ -1.65
VPS28YPL065W UTP9P38882 575 aaKnown RBP4.75□□□□□ -1.65
VPS28YPL065W ROK1P45818 564 aaPredicted RBP4.75□□□□□ -1.65
VPS28YPL065W JJJ1P53863 590 aa4.75□□□□□ -1.65
VPS28YPL065W DUG3P53871 357 aa4.75□□□□□ -1.65
VPS28YPL065W NUP100Q02629 959 aa4.75□□□□□ -1.65
VPS28YPL065W MRD1Q06106 887 aaKnown RBP4.75□□□□□ -1.65
VPS28YPL065W YDL057WQ07379 328 aa4.75□□□□□ -1.65
VPS28YPL065W RIM20Q12033 661 aa4.75□□□□□ -1.65
VPS28YPL065W RRG1Q12167 365 aaPredicted RBP4.75□□□□□ -1.65
VPS28YPL065W GRX6Q12438 231 aa4.75□□□□□ -1.65
VPS28YPL065W RTN2Q12443 393 aa4.75□□□□□ -1.65
VPS28YPL065W PRD1P25375 712 aa4.74□□□□□ -1.65
VPS28YPL065W VID24P38263 362 aa4.74□□□□□ -1.65
VPS28YPL065W CIN4P39110 191 aa4.74□□□□□ -1.65
VPS28YPL065W YGR126WP53274 230 aa4.74□□□□□ -1.65
VPS28YPL065W SMM1P53720 384 aaKnown RBP4.74□□□□□ -1.65
VPS28YPL065W RTT103Q05543 409 aa4.74□□□□□ -1.65
VPS28YPL065W NCE102Q12207 173 aaRIP-Chip data4.74□□□□□ -1.65not detected
VPS28YPL065W SCM3Q12334 223 aa4.74□□□□□ -1.65
VPS28YPL065W FUR1P18562 216 aaKnown RBP4.73□□□□□ -1.65
VPS28YPL065W SGV1P23293 657 aaKnown RBP4.73□□□□□ -1.65
VPS28YPL065W YME1P32795 747 aa4.73□□□□□ -1.65
VPS28YPL065W MRE11P32829 692 aa4.73□□□□□ -1.65
VPS28YPL065W PMT1P33775 817 aa4.73□□□□□ -1.65
VPS28YPL065W YPK3P38070 525 aa4.73□□□□□ -1.65
VPS28YPL065W MSR1P38714 643 aa4.73□□□□□ -1.65
VPS28YPL065W SMF1P38925 575 aa4.73□□□□□ -1.65
VPS28YPL065W YND1P40009 630 aa4.73□□□□□ -1.65
VPS28YPL065W VTC2P43585 828 aa4.73□□□□□ -1.65
VPS28YPL065W SNG1P46950 547 aa4.73□□□□□ -1.65
VPS28YPL065W YVH1Q02256 364 aaKnown RBP4.73□□□□□ -1.65
VPS28YPL065W FIN1Q03898 291 aa4.73□□□□□ -1.65
VPS28YPL065W CDC45Q08032 650 aa4.73□□□□□ -1.65
VPS28YPL065W YOL159C-AQ3E769 90 aa4.73□□□□□ -1.65
VPS28YPL065W NOP1P15646 327 aaKnown RBP4.72□□□□□ -1.65
VPS28YPL065W RPS2P25443 254 aaKnown RBP4.72□□□□□ -1.65
VPS28YPL065W RTS2P40962 232 aa4.72□□□□□ -1.65
VPS28YPL065W AIM22P47051 409 aa4.72□□□□□ -1.65
VPS28YPL065W BUD32P53323 261 aa4.72□□□□□ -1.65
VPS28YPL065W YNL181WP53878 407 aa4.72□□□□□ -1.65
VPS28YPL065W YPL014WQ02606 381 aa4.72□□□□□ -1.65
VPS28YPL065W YMR155WQ03795 547 aa4.72□□□□□ -1.65
VPS28YPL065W SPC19Q03954 165 aa4.72□□□□□ -1.65
VPS28YPL065W ATG29Q12092 213 aa4.72□□□□□ -1.65
VPS28YPL065W BSC1Q12140 328 aa4.72□□□□□ -1.65
VPS28YPL065W PEP4P07267 405 aaKnown RBP4.71□□□□□ -1.66
VPS28YPL065W GID7P25569 745 aa4.71□□□□□ -1.66
VPS28YPL065W MGR1P25573 417 aa4.71□□□□□ -1.66
VPS28YPL065W MCM4P30665 933 aaKnown RBP4.71□□□□□ -1.66
VPS28YPL065W NPL6P32832 435 aa4.71□□□□□ -1.66
VPS28YPL065W LAG1P38703 411 aa4.71□□□□□ -1.66
VPS28YPL065W GPD2P41911 440 aaKnown RBP4.71□□□□□ -1.66
VPS28YPL065W FET5P43561 622 aa4.71□□□□□ -1.66
VPS28YPL065W TWF1P53250 332 aa4.71□□□□□ -1.66
VPS28YPL065W DRN1P53255 507 aaKnown RBP4.71□□□□□ -1.66
VPS28YPL065W YGR250CP53316 781 aaKnown RBP4.71□□□□□ -1.66
VPS28YPL065W TOF2Q02208 771 aa4.71□□□□□ -1.66
VPS28YPL065W SMA1Q02651 245 aa4.71□□□□□ -1.66
VPS28YPL065W YMR160WQ03823 816 aa4.71□□□□□ -1.66
VPS28YPL065W MFT1P33441 392 aaKnown RBP4.7□□□□□ -1.66
VPS28YPL065W CMC1P36064 111 aa4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 21 ms