RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C YHR033WP38690 423 aa3.67□□□□□ -1.82
SGN1YIR001C PHO12P38693 467 aa3.67□□□□□ -1.82
SGN1YIR001C DBP8P38719 431 aa3.67□□□□□ -1.82
SGN1YIR001C RTT107P38850 1070 aa3.67□□□□□ -1.82
SGN1YIR001C TIM17P39515 158 aa3.67□□□□□ -1.82
SGN1YIR001C YML6P51998 286 aa3.67□□□□□ -1.82
SGN1YIR001C ARP4P80428 489 aa3.67□□□□□ -1.82
SGN1YIR001C YDR132CQ03900 495 aa3.67□□□□□ -1.82
SGN1YIR001C SSL1Q04673 461 aaPredicted RBP3.67□□□□□ -1.82
SGN1YIR001C RRP45Q05636 305 aaKnown RBP3.67□□□□□ -1.82
SGN1YIR001C ESC2Q06340 456 aa3.67□□□□□ -1.82
SGN1YIR001C CDA1Q06702 301 aa3.67□□□□□ -1.82
SGN1YIR001C YLR030WQ07967 263 aa3.67□□□□□ -1.82
SGN1YIR001C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SGN1YIR001C YLR358CO13565 187 aa3.66□□□□□ -1.82
SGN1YIR001C MDM35O60200 86 aa3.66□□□□□ -1.82
SGN1YIR001C CYC1P00044 109 aaPredicted RBP3.66□□□□□ -1.82
SGN1YIR001C YCR006CP25350 157 aa3.66□□□□□ -1.82
SGN1YIR001C IMG1P25626 169 aa3.66□□□□□ -1.82
SGN1YIR001C NDI1P32340 513 aa3.66□□□□□ -1.82
SGN1YIR001C IMP3P32899 183 aaPredicted RBP3.66□□□□□ -1.82
SGN1YIR001C CNS1P33313 385 aa3.66□□□□□ -1.82
SGN1YIR001C SKN1P33336 771 aa3.66□□□□□ -1.82
SGN1YIR001C YBL055CP34220 418 aaPredicted RBP3.66□□□□□ -1.82
SGN1YIR001C STB6P36085 766 aa3.66□□□□□ -1.82
SGN1YIR001C MAK5P38112 773 aaPredicted RBP3.66□□□□□ -1.82
SGN1YIR001C YBP1P38315 674 aa3.66□□□□□ -1.82
SGN1YIR001C YHR182WP38870 785 aa3.66□□□□□ -1.82
SGN1YIR001C SAW1P39735 261 aa3.66□□□□□ -1.82
SGN1YIR001C YEL073CP39974 107 aa3.66□□□□□ -1.82
SGN1YIR001C YAT2P40017 923 aa3.66□□□□□ -1.82
SGN1YIR001C LRO1P40345 661 aa3.66□□□□□ -1.82
SGN1YIR001C ALG8P40351 577 aa3.66□□□□□ -1.82
SGN1YIR001C ARG2P40360 574 aa3.66□□□□□ -1.82
SGN1YIR001C MND2P40577 368 aa3.66□□□□□ -1.82
SGN1YIR001C YJL107CP42947 387 aa3.66□□□□□ -1.82
SGN1YIR001C IKS1P47042 667 aa3.66□□□□□ -1.82
SGN1YIR001C TRM9P49957 279 aa3.66□□□□□ -1.82
SGN1YIR001C YGL260WP53056 76 aa3.66□□□□□ -1.82
SGN1YIR001C ZRG17P53735 605 aa3.66□□□□□ -1.82
SGN1YIR001C VPS75P53853 264 aa3.66□□□□□ -1.82
SGN1YIR001C RHO3Q00245 231 aaKnown RBP3.66□□□□□ -1.82
SGN1YIR001C MET14Q02196 202 aa3.66□□□□□ -1.82
SGN1YIR001C NUP100Q02629 959 aa3.66□□□□□ -1.82
SGN1YIR001C VPS16Q03308 798 aa3.66□□□□□ -1.82
SGN1YIR001C PFA4Q12006 378 aa3.66□□□□□ -1.82
SGN1YIR001C DIN7Q12086 430 aa3.66□□□□□ -1.82
SGN1YIR001C YPL066WQ12194 479 aa3.66□□□□□ -1.82
SGN1YIR001C LDB17Q12342 491 aa3.66□□□□□ -1.82
SGN1YIR001C PHO13P19881 312 aa3.65□□□□□ -1.83
SGN1YIR001C VPS34P22543 875 aa3.65□□□□□ -1.83
SGN1YIR001C AGP1P25376 633 aa3.65□□□□□ -1.83
SGN1YIR001C SBA1P28707 216 aaKnown RBP3.65□□□□□ -1.83
SGN1YIR001C SIN4P32259 974 aa3.65□□□□□ -1.83
SGN1YIR001C GDA1P32621 518 aa3.65□□□□□ -1.83
SGN1YIR001C KES1P35844 434 aaKnown RBP3.65□□□□□ -1.83
SGN1YIR001C MRPL37P36532 105 aa3.65□□□□□ -1.83
SGN1YIR001C MEF2P39677 819 aa3.65□□□□□ -1.83
SGN1YIR001C GIM4P40005 111 aaKnown RBP3.65□□□□□ -1.83
SGN1YIR001C DJP1P40564 432 aa3.65□□□□□ -1.83
SGN1YIR001C IME4P41833 600 aa3.65□□□□□ -1.83
SGN1YIR001C ALY2P47029 1046 aa3.65□□□□□ -1.83
SGN1YIR001C UBX6P47049 396 aa3.65□□□□□ -1.83
SGN1YIR001C GND2P53319 492 aa3.65□□□□□ -1.83
SGN1YIR001C CPR6P53691 371 aaKnown RBP3.65□□□□□ -1.83
SGN1YIR001C NOP15P53927 220 aaPredicted RBP3.65□□□□□ -1.83
SGN1YIR001C SSL2Q00578 843 aa3.65□□□□□ -1.83
SGN1YIR001C SLU7Q02775 382 aaKnown RBP3.65□□□□□ -1.83
SGN1YIR001C PEX25Q02969 394 aa3.65□□□□□ -1.83
SGN1YIR001C RPN9Q04062 393 aaKnown RBP3.65□□□□□ -1.83
SGN1YIR001C RRN11Q04712 507 aa3.65□□□□□ -1.83
SGN1YIR001C VTA1Q06263 330 aa3.65□□□□□ -1.83
SGN1YIR001C GRS2Q06817 618 aa3.65□□□□□ -1.83
SGN1YIR001C ADY3Q07732 790 aa3.65□□□□□ -1.83
SGN1YIR001C NEW1Q08972 1196 aaKnown RBP3.65□□□□□ -1.83
SGN1YIR001C TMS1Q12116 473 aa3.65□□□□□ -1.83
SGN1YIR001C GTT2Q12390 233 aa3.65□□□□□ -1.83
SGN1YIR001C YLR149CQ99296 730 aa3.65□□□□□ -1.83
SGN1YIR001C URA4P20051 364 aa3.64□□□□□ -1.83
SGN1YIR001C SEC62P21825 274 aa3.64□□□□□ -1.83
SGN1YIR001C YSR3P23501 404 aa3.64□□□□□ -1.83
SGN1YIR001C MRPL9P31334 269 aa3.64□□□□□ -1.83
SGN1YIR001C HEM12P32347 362 aaPredicted RBP3.64□□□□□ -1.83
SGN1YIR001C TOD6P34219 525 aa3.64□□□□□ -1.83
SGN1YIR001C DEF1P35732 738 aaKnown RBP3.64□□□□□ -1.83
SGN1YIR001C RPF2P36160 344 aaKnown RBP3.64□□□□□ -1.83
SGN1YIR001C CTP1P38152 299 aa3.64□□□□□ -1.83
SGN1YIR001C SET5P38890 526 aaKnown RBP3.64□□□□□ -1.83
SGN1YIR001C YHR210CP38893 341 aa3.64□□□□□ -1.83
SGN1YIR001C CKB2P38930 258 aa3.64□□□□□ -1.83
SGN1YIR001C PXA1P41909 870 aa3.64□□□□□ -1.83
SGN1YIR001C ELP2P42935 788 aa3.64□□□□□ -1.83
SGN1YIR001C YGL176CP46945 554 aa3.64□□□□□ -1.83
SGN1YIR001C HLJ1P48353 224 aa3.64□□□□□ -1.83
SGN1YIR001C BRO1P48582 844 aa3.64□□□□□ -1.83
SGN1YIR001C ESF2P53743 316 aaKnown RBP3.64□□□□□ -1.83
SGN1YIR001C PRO2P54885 456 aaKnown RBP3.64□□□□□ -1.83
SGN1YIR001C OSH6Q02201 448 aa3.64□□□□□ -1.83
SGN1YIR001C TRS31Q03337 283 aa3.64□□□□□ -1.83
SGN1YIR001C ROT1Q03691 256 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms