RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A VID22Q05934 901 aa3.34□□□□□ -1.87
EFG1YGR271C-A FMP45Q07651 309 aa3.34□□□□□ -1.87
EFG1YGR271C-A THI20Q08224 551 aa3.34□□□□□ -1.87
EFG1YGR271C-A RDR1Q08904 546 aa3.34□□□□□ -1.87
EFG1YGR271C-A SMC6Q12749 1114 aa3.34□□□□□ -1.87
EFG1YGR271C-A YOR019WQ99248 730 aa3.34□□□□□ -1.87
EFG1YGR271C-A TY1B-AO13527 1196 aaKnown RBP3.33□□□□□ -1.88
EFG1YGR271C-A SNF1P06782 633 aaKnown RBP3.33□□□□□ -1.88
EFG1YGR271C-A RPB2P08518 1224 aaKnown RBP3.33□□□□□ -1.88
EFG1YGR271C-A CDC16P09798 840 aa3.33□□□□□ -1.88
EFG1YGR271C-A RPC53P25441 422 aa3.33□□□□□ -1.88
EFG1YGR271C-A RPS2P25443 254 aaKnown RBP3.33□□□□□ -1.88
EFG1YGR271C-A SNC1P31109 117 aa3.33□□□□□ -1.88
EFG1YGR271C-A TIF3P34167 436 aaKnown RBP3.33□□□□□ -1.88
EFG1YGR271C-A TIF5P38431 405 aaKnown RBP3.33□□□□□ -1.88
EFG1YGR271C-A DIA4P38705 446 aaPredicted RBP3.33□□□□□ -1.88
EFG1YGR271C-A AXL2P38928 823 aa3.33□□□□□ -1.88
EFG1YGR271C-A PSD1P39006 500 aa3.33□□□□□ -1.88
EFG1YGR271C-A MEP1P40260 492 aa3.33□□□□□ -1.88
EFG1YGR271C-A MKT1P40850 830 aaKnown RBP3.33□□□□□ -1.88
EFG1YGR271C-A AXL1P40851 1208 aa3.33□□□□□ -1.88
EFG1YGR271C-A YJL132WP47014 750 aa3.33□□□□□ -1.88
EFG1YGR271C-A IKS1P47042 667 aa3.33□□□□□ -1.88
EFG1YGR271C-A RTT101P47050 842 aa3.33□□□□□ -1.88
EFG1YGR271C-A SHE10P53075 577 aa3.33□□□□□ -1.88
EFG1YGR271C-A TIM10P87108 93 aa3.33□□□□□ -1.88
EFG1YGR271C-A RTT109Q07794 436 aa3.33□□□□□ -1.88
EFG1YGR271C-A SFI1Q12369 946 aa3.33□□□□□ -1.88
EFG1YGR271C-A GDH1P07262 454 aaKnown RBP3.32□□□□□ -1.88
EFG1YGR271C-A PUT2P07275 575 aa3.32□□□□□ -1.88
EFG1YGR271C-A FUM1P08417 488 aaKnown RBP3.32□□□□□ -1.88
EFG1YGR271C-A NAT1P12945 854 aaKnown RBP3.32□□□□□ -1.88
EFG1YGR271C-A RED1P14291 827 aa3.32□□□□□ -1.88
EFG1YGR271C-A PDX1P16451 410 aa3.32□□□□□ -1.88
EFG1YGR271C-A DBF4P32325 704 aa3.32□□□□□ -1.88
EFG1YGR271C-A ECM15P35195 104 aa3.32□□□□□ -1.88
EFG1YGR271C-A BYE1P36106 594 aa3.32□□□□□ -1.88
EFG1YGR271C-A YNG2P38806 282 aaKnown RBP3.32□□□□□ -1.88
EFG1YGR271C-A UME6P39001 836 aa3.32□□□□□ -1.88
EFG1YGR271C-A RPH1P39956 796 aa3.32□□□□□ -1.88
EFG1YGR271C-A YER010CP40011 234 aa3.32□□□□□ -1.88
EFG1YGR271C-A RPR2P40571 144 aa3.32□□□□□ -1.88
EFG1YGR271C-A STR3P53101 465 aaKnown RBP3.32□□□□□ -1.88
EFG1YGR271C-A CBK1P53894 756 aa3.32□□□□□ -1.88
EFG1YGR271C-A RCO1Q04779 684 aa3.32□□□□□ -1.88
EFG1YGR271C-A YDR286CQ05530 114 aa3.32□□□□□ -1.88
EFG1YGR271C-A CDC45Q08032 650 aa3.32□□□□□ -1.88
EFG1YGR271C-A PGC1Q08959 321 aa3.32□□□□□ -1.88
EFG1YGR271C-A AGA1P32323 725 aa3.31□□□□□ -1.88
EFG1YGR271C-A SWH1P35845 1188 aa3.31□□□□□ -1.88
EFG1YGR271C-A UTP9P38882 575 aaKnown RBP3.31□□□□□ -1.88
EFG1YGR271C-A IME4P41833 600 aa3.31□□□□□ -1.88
EFG1YGR271C-A RMD8P43620 662 aa3.31□□□□□ -1.88
EFG1YGR271C-A RPS10BP46784 105 aaKnown RBP3.31□□□□□ -1.88
EFG1YGR271C-A SAM50P53969 484 aa3.31□□□□□ -1.88
EFG1YGR271C-A YVH1Q02256 364 aaKnown RBP3.31□□□□□ -1.88
EFG1YGR271C-A DIC1Q06143 298 aa3.31□□□□□ -1.88
EFG1YGR271C-A RRP9Q06506 573 aaKnown RBP3.31□□□□□ -1.88
EFG1YGR271C-A TRM8Q12009 286 aa3.31□□□□□ -1.88
EFG1YGR271C-A HSP42Q12329 375 aa3.31□□□□□ -1.88
EFG1YGR271C-A SNF3P10870 884 aa3.3□□□□□ -1.88
EFG1YGR271C-A CKA1P15790 372 aa3.3□□□□□ -1.88
EFG1YGR271C-A PFK2P16862 959 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
EFG1YGR271C-A MCK1P21965 375 aaKnown RBP3.3□□□□□ -1.88
EFG1YGR271C-A ATS1P31386 333 aa3.3□□□□□ -1.88
EFG1YGR271C-A SPC110P32380 944 aa3.3□□□□□ -1.88
EFG1YGR271C-A NDC1P32500 655 aa3.3□□□□□ -1.88
EFG1YGR271C-A CBF2P32504 956 aa3.3□□□□□ -1.88
EFG1YGR271C-A YBR225WP38321 900 aa3.3□□□□□ -1.88
EFG1YGR271C-A TSC10P38342 320 aa3.3□□□□□ -1.88
EFG1YGR271C-A LAG1P38703 411 aa3.3□□□□□ -1.88
EFG1YGR271C-A POP2P39008 433 aa3.3□□□□□ -1.88
EFG1YGR271C-A LSM5P40089 93 aaKnown RBP3.3□□□□□ -1.88
EFG1YGR271C-A ARF3P40994 183 aaRIP-Chip data3.3□□□□□ -1.88not detected
EFG1YGR271C-A PIL1P53252 339 aaKnown RBP3.3□□□□□ -1.88
EFG1YGR271C-A VPS9P54787 451 aa3.3□□□□□ -1.88
EFG1YGR271C-A MUB1Q03162 620 aa3.3□□□□□ -1.88
EFG1YGR271C-A YMR087WQ04299 284 aa3.3□□□□□ -1.88
EFG1YGR271C-A VTI1Q04338 217 aa3.3□□□□□ -1.88
EFG1YGR271C-A MFB1Q04922 465 aa3.3□□□□□ -1.88
EFG1YGR271C-A YDR341CQ05506 607 aaKnown RBP3.3□□□□□ -1.88
EFG1YGR271C-A ETT1Q08421 412 aaKnown RBP3.3□□□□□ -1.88
EFG1YGR271C-A RPS10AQ08745 105 aaPredicted RBP3.3□□□□□ -1.88
EFG1YGR271C-A SET6Q12529 373 aa3.3□□□□□ -1.88
EFG1YGR271C-A YBR085C-AO43137 85 aa3.29□□□□□ -1.88
EFG1YGR271C-A OLE1P21147 510 aaKnown RBP3.29□□□□□ -1.88
EFG1YGR271C-A LCB1P25045 558 aaKnown RBP3.29□□□□□ -1.88
EFG1YGR271C-A SGF29P25554 259 aa3.29□□□□□ -1.88
EFG1YGR271C-A ERG3P32353 365 aa3.29□□□□□ -1.88
EFG1YGR271C-A DPH2P32461 534 aa3.29□□□□□ -1.88
EFG1YGR271C-A PDB1P32473 366 aaKnown RBP3.29□□□□□ -1.88
EFG1YGR271C-A SAC6P32599 642 aaKnown RBP3.29□□□□□ -1.88
EFG1YGR271C-A VPS17P32913 551 aa3.29□□□□□ -1.88
EFG1YGR271C-A SIP2P34164 415 aaKnown RBP3.29□□□□□ -1.88
EFG1YGR271C-A PCA1P38360 1216 aa3.29□□□□□ -1.88
EFG1YGR271C-A YGL242CP53066 181 aa3.29□□□□□ -1.88
EFG1YGR271C-A ARE2P53629 642 aaKnown RBP3.29□□□□□ -1.88
EFG1YGR271C-A RHO4Q00246 291 aa3.29□□□□□ -1.88
EFG1YGR271C-A SSK1Q07084 712 aa3.29□□□□□ -1.88
EFG1YGR271C-A NUS1Q12063 375 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms