RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W SLH1P53327 1967 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W GAL4P04386 881 aa6.86□□□□□ -1.31
PDA1YER178W SPT3P06844 337 aa6.86□□□□□ -1.31
PDA1YER178W YCR090CP25654 182 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W MEI5P32489 222 aa6.86□□□□□ -1.31
PDA1YER178W FMP46P36141 133 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W YHB1P39676 399 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W GIM4P40005 111 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W YRB1P41920 201 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W FAR3P46671 204 aa6.86□□□□□ -1.31
PDA1YER178W MPS2P53159 387 aa6.86□□□□□ -1.31
PDA1YER178W IST1P53843 298 aaPredicted RBP6.86□□□□□ -1.31
PDA1YER178W YNL058CP53947 316 aa6.86□□□□□ -1.31
PDA1YER178W HPT1Q04178 221 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W HDA3Q06623 655 aa6.86□□□□□ -1.31
PDA1YER178W GRS2Q06817 618 aa6.86□□□□□ -1.31
PDA1YER178W RPN8Q08723 338 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W YPL245WQ12179 454 aaKnown RBP6.86□□□□□ -1.31
PDA1YER178W SUL2Q12325 893 aa6.86□□□□□ -1.31
PDA1YER178W SPE4Q12455 300 aa6.86□□□□□ -1.31
PDA1YER178W HSH49Q99181 213 aaPredicted RBP6.86□□□□□ -1.31
PDA1YER178W SEM1O94742 89 aa6.85□□□□□ -1.31
PDA1YER178W RHO2P06781 192 aa6.85□□□□□ -1.31
PDA1YER178W STE3P06783 470 aa6.85□□□□□ -1.31
PDA1YER178W CWP1P28319 239 aa6.85□□□□□ -1.31
PDA1YER178W KIP2P28743 706 aa6.85□□□□□ -1.31
PDA1YER178W CDC13P32797 924 aaKnown RBP6.85□□□□□ -1.31
PDA1YER178W SKN1P33336 771 aa6.85□□□□□ -1.31
PDA1YER178W RMA1P36001 430 aaKnown RBP6.85□□□□□ -1.31
PDA1YER178W EAP1P36041 632 aaKnown RBP6.85□□□□□ -1.31
PDA1YER178W RIM11P38615 370 aa6.85□□□□□ -1.31
PDA1YER178W INM1P38710 295 aa6.85□□□□□ -1.31
PDA1YER178W LYS1P38998 373 aaRIP-Chip data6.85□□□□□ -1.31not detected
PDA1YER178W PTR3P43606 678 aa6.85□□□□□ -1.31
PDA1YER178W SHY1P53266 389 aa6.85□□□□□ -1.31
PDA1YER178W ARE2P53629 642 aaKnown RBP6.85□□□□□ -1.31
PDA1YER178W SDH1Q00711 640 aa6.85□□□□□ -1.31
PDA1YER178W BNA5Q05979 453 aa6.85□□□□□ -1.31
PDA1YER178W SEC10Q06245 871 aa6.85□□□□□ -1.31
PDA1YER178W YDR056CQ12025 205 aa6.85□□□□□ -1.31
PDA1YER178W YPR022CQ12139 1133 aa6.85□□□□□ -1.31
PDA1YER178W HAL9Q12180 1030 aa6.85□□□□□ -1.31
PDA1YER178W NOT5Q12514 560 aaPredicted RBP6.85□□□□□ -1.31
PDA1YER178W YIL046W-AQ3E7Z4 54 aa6.85□□□□□ -1.31
PDA1YER178W TY4A-HQ6Q5P6 413 aa6.85□□□□□ -1.31
PDA1YER178W LEU4P06208 619 aaKnown RBP6.84□□□□□ -1.31
PDA1YER178W ARG1P22768 420 aa6.84□□□□□ -1.31
PDA1YER178W MSH1P25846 959 aa6.84□□□□□ -1.31
PDA1YER178W PET309P32522 965 aaPredicted RBP6.84□□□□□ -1.31
PDA1YER178W DMA1P38823 416 aa6.84□□□□□ -1.31
PDA1YER178W SEC31P38968 1273 aaKnown RBP6.84□□□□□ -1.31
PDA1YER178W RGA1P39083 1007 aa6.84□□□□□ -1.31
PDA1YER178W SPF1P39986 1215 aaKnown RBP6.84□□□□□ -1.31
PDA1YER178W EMP65P40085 556 aa6.84□□□□□ -1.31
PDA1YER178W MEP1P40260 492 aa6.84□□□□□ -1.31
PDA1YER178W TDA10P42938 290 aa6.84□□□□□ -1.31
PDA1YER178W YGL176CP46945 554 aa6.84□□□□□ -1.31
PDA1YER178W YJR149WP47177 404 aa6.84□□□□□ -1.31
PDA1YER178W YPT32P51996 222 aaKnown RBP6.84□□□□□ -1.31
PDA1YER178W RCF2P53721 224 aa6.84□□□□□ -1.31
PDA1YER178W RHO3Q00245 231 aaKnown RBP6.84□□□□□ -1.31
PDA1YER178W TVP15Q03860 143 aa6.84□□□□□ -1.31
PDA1YER178W YOL019WQ08157 551 aa6.84□□□□□ -1.31
PDA1YER178W VHS3Q08438 674 aa6.84□□□□□ -1.31
PDA1YER178W NOP58Q12499 511 aaKnown RBP6.84□□□□□ -1.31
PDA1YER178W MHT1Q12525 324 aa6.84□□□□□ -1.31
PDA1YER178W KIN2P13186 1147 aaKnown RBP6.83□□□□□ -1.32
PDA1YER178W HSC82P15108 705 aaKnown RBP6.83□□□□□ -1.32
PDA1YER178W TEC1P18412 486 aa6.83□□□□□ -1.32
PDA1YER178W RPB4P20433 221 aaPredicted RBP6.83□□□□□ -1.32
PDA1YER178W YCR006CP25350 157 aa6.83□□□□□ -1.32
PDA1YER178W MLS1P30952 554 aa6.83□□□□□ -1.32
PDA1YER178W HXT4P32467 576 aa6.83□□□□□ -1.32
PDA1YER178W TRM7P38238 310 aaKnown RBP6.83□□□□□ -1.32
PDA1YER178W GGC1P38988 300 aa6.83□□□□□ -1.32
PDA1YER178W HXT6P39003 570 aaKnown RBP6.83□□□□□ -1.32
PDA1YER178W HXT7P39004 570 aa6.83□□□□□ -1.32
PDA1YER178W FET5P43561 622 aa6.83□□□□□ -1.32
PDA1YER178W YJR030CP47101 745 aa6.83□□□□□ -1.32
PDA1YER178W LSM3P57743 89 aaKnown RBP6.83□□□□□ -1.32
PDA1YER178W EGD1Q02642 157 aaKnown RBP6.83□□□□□ -1.32
PDA1YER178W YML131WQ03102 365 aa6.83□□□□□ -1.32
PDA1YER178W BCH1Q05029 724 aa6.83□□□□□ -1.32
PDA1YER178W YMR034CQ05131 434 aaPredicted RBP6.83□□□□□ -1.32
PDA1YER178W GLO2Q05584 274 aa6.83□□□□□ -1.32
PDA1YER178W YLR456WQ06199 204 aa6.83□□□□□ -1.32
PDA1YER178W YOL036WQ08206 761 aa6.83□□□□□ -1.32
PDA1YER178W YOL073CQ08232 322 aa6.83□□□□□ -1.32
PDA1YER178W RUD3Q12234 484 aaKnown RBP6.83□□□□□ -1.32
PDA1YER178W RGT2Q12300 763 aa6.83□□□□□ -1.32
PDA1YER178W YDR262WQ12331 272 aa6.83□□□□□ -1.32
PDA1YER178W MSB1P21339 1137 aaKnown RBP6.82□□□□□ -1.32
PDA1YER178W BAS1P22035 811 aa6.82□□□□□ -1.32
PDA1YER178W SEC15P22224 910 aa6.82□□□□□ -1.32
PDA1YER178W AGP1P25376 633 aa6.82□□□□□ -1.32
PDA1YER178W YKR078WP36158 585 aaKnown RBP6.82□□□□□ -1.32
PDA1YER178W MUM2P38236 366 aa6.82□□□□□ -1.32
PDA1YER178W YHR033WP38690 423 aa6.82□□□□□ -1.32
PDA1YER178W YHL008CP38750 627 aa6.82□□□□□ -1.32
PDA1YER178W FKH2P41813 862 aa6.82□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms