RNA–Protein interactions for RNA: YBR228W

SLX1, Transcript of Endonuclease involved in DNA recombination and repair, yeast

Gene SLX1, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLX1	YBR228W	UTP21	Q06078	939 aa	Predicted RBP	4.48	□□□□□ -1.69
SLX1	YBR228W	ARP6	Q12509	438 aa		4.48	□□□□□ -1.69
SLX1	YBR228W	RIF1	P29539	1916 aa		4.47	□□□□□ -1.69
SLX1	YBR228W	HIS4	P00815	799 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	ILV1	P00927	576 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	SST2	P11972	698 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	HNM1	P19807	563 aa		4.47	□□□□□ -1.69
SLX1	YBR228W	BMH1	P29311	267 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	YKT6	P36015	200 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	ADE17	P38009	592 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	EFM2	P38347	419 aa		4.47	□□□□□ -1.69
SLX1	YBR228W	MOT3	P54785	490 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	YDR415C	Q04033	374 aa	Predicted RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	VMS1	Q04311	632 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	SWA2	Q06677	668 aa		4.47	□□□□□ -1.69
SLX1	YBR228W	ETT1	Q08421	412 aa	Known RBP	4.47	□□□□□ -1.69
SLX1	YBR228W	TY3A-G	Q12173	290 aa		4.47	□□□□□ -1.69
SLX1	YBR228W	ERP3	Q12403	225 aa		4.47	□□□□□ -1.69
SLX1	YBR228W	TY3A-I	Q99219	290 aa		4.47	□□□□□ -1.69
SLX1	YBR228W	TY1B-A	O13527	1196 aa	Known RBP	4.46	□□□□□ -1.7
SLX1	YBR228W	RPL22A	P05749	121 aa	Known RBP	4.46	□□□□□ -1.7
SLX1	YBR228W	MIS1	P09440	975 aa	Known RBP	4.46	□□□□□ -1.7
SLX1	YBR228W	TKL1	P23254	680 aa	Known RBP	4.46	□□□□□ -1.7
SLX1	YBR228W	MGR1	P25573	417 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	UBP11	P36026	717 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	UBP13	P38187	747 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	NPR3	P38742	1146 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	BUD16	P39988	312 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	PHM8	P40025	321 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	TAN1	P53072	289 aa	Predicted RBP	4.46	□□□□□ -1.7
SLX1	YBR228W	YGL039W	P53183	348 aa	Known RBP	4.46	□□□□□ -1.7
SLX1	YBR228W	SLD5	Q03406	294 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	YLH47	Q06493	454 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	MCP2	Q06567	569 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	ATG23	Q06671	453 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	SMC6	Q12749	1114 aa		4.46	□□□□□ -1.7
SLX1	YBR228W	FOB1	O13329	566 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	CLC1	P17891	233 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	LRE1	P25579	583 aa	Known RBP	4.45	□□□□□ -1.7
SLX1	YBR228W	CDC15	P27636	974 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	DBP7	P36120	742 aa	Known RBP	4.45	□□□□□ -1.7
SLX1	YBR228W	REG2	P38232	338 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	GPD2	P41911	440 aa	Known RBP	4.45	□□□□□ -1.7
SLX1	YBR228W	CBK1	P53894	756 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	PGA2	P53903	129 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	CRZ1	P53968	678 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	YMR321C	Q04898	105 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	FUS2	Q05670	677 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	PSR2	Q07949	397 aa		4.45	□□□□□ -1.7
SLX1	YBR228W	CLN3	P13365	580 aa		4.44	□□□□□ -1.7
SLX1	YBR228W	CKA2	P19454	339 aa		4.44	□□□□□ -1.7
SLX1	YBR228W	ISY1	P21374	235 aa	Predicted RBP	4.44	□□□□□ -1.7
SLX1	YBR228W	SAC6	P32599	642 aa	Known RBP	4.44	□□□□□ -1.7
SLX1	YBR228W	VTC2	P43585	828 aa		4.44	□□□□□ -1.7
SLX1	YBR228W	SGF73	P53165	657 aa		4.44	□□□□□ -1.7
SLX1	YBR228W	RSC1	P53236	928 aa		4.44	□□□□□ -1.7
SLX1	YBR228W	YML003W	P0CF16	290 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	GUK1	P15454	187 aa	Known RBP	4.43	□□□□□ -1.7
SLX1	YBR228W	YSP3	P25036	478 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	TRS65	P32893	560 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	PDR3	P33200	976 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	SIP3	P38717	1229 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	FIS1	P40515	155 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	ERR3	P42222	437 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	CUL3	P53202	744 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	ZPR1	P53303	486 aa	Known RBP	4.43	□□□□□ -1.7
SLX1	YBR228W	DCP2	P53550	970 aa	Known RBP	4.43	□□□□□ -1.7
SLX1	YBR228W	ASI1	P54074	624 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	SMA1	Q02651	245 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	SWT1	Q12104	458 aa		4.43	□□□□□ -1.7
SLX1	YBR228W	CDC23	P16522	626 aa		4.42	□□□□□ -1.7
SLX1	YBR228W	DHH1	P39517	506 aa	Known RBP	4.42	□□□□□ -1.7
SLX1	YBR228W	NOC2	P39744	710 aa	Known RBP	4.42	□□□□□ -1.7
SLX1	YBR228W	HMF1	P40037	129 aa	Known RBP	4.42	□□□□□ -1.7
SLX1	YBR228W	IMA1	P53051	589 aa		4.42	□□□□□ -1.7
SLX1	YBR228W	TLG2	Q08144	397 aa		4.42	□□□□□ -1.7
SLX1	YBR228W	TMA7	Q3E764	64 aa	Known RBP	4.42	□□□□□ -1.7
SLX1	YBR228W	LAA1	P39526	2014 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	TCP1	P12612	559 aa	Known RBP	4.41	□□□□□ -1.7
SLX1	YBR228W	POX1	P13711	748 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	STE50	P25344	346 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	TVP38	P36164	337 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	MRPL10	P36520	322 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	PSY4	P38193	441 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	LEU5	P38702	357 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	FSH1	P38777	243 aa	Known RBP	4.41	□□□□□ -1.7
SLX1	YBR228W	PSF2	P40359	213 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	YIL161W	P40449	235 aa	Known RBP	4.41	□□□□□ -1.7
SLX1	YBR228W	RPS7B	P48164	190 aa	Known RBP	4.41	□□□□□ -1.7
SLX1	YBR228W	CPR6	P53691	371 aa	Known RBP	4.41	□□□□□ -1.7
SLX1	YBR228W	ARK1	P53974	638 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	YLR352W	Q06479	807 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	YDL057W	Q07379	328 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	YOL075C	Q08234	1294 aa		4.41	□□□□□ -1.7
SLX1	YBR228W	BAR1	P12630	587 aa		4.4	□□□□□ -1.71
SLX1	YBR228W	SEC1	P30619	724 aa	Known RBP	4.4	□□□□□ -1.71
SLX1	YBR228W	PSO2	P30620	661 aa		4.4	□□□□□ -1.71
SLX1	YBR228W	TOM20	P35180	183 aa		4.4	□□□□□ -1.71
SLX1	YBR228W	LHS1	P36016	881 aa		4.4	□□□□□ -1.71
SLX1	YBR228W	YPK3	P38070	525 aa		4.4	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms