RNA–Protein interactions for RNA: YOR339C

UBC11, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC11, Length 471 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC11YOR339C YJL070CP40361 888 aa5.75□□□□□ -1.49
UBC11YOR339C UTP18P40362 594 aaPredicted RBP5.75□□□□□ -1.49
UBC11YOR339C COA1P40452 197 aa5.75□□□□□ -1.49
UBC11YOR339C VMA13P41807 478 aaKnown RBP5.75□□□□□ -1.49
UBC11YOR339C YFR018CP43599 363 aa5.75□□□□□ -1.49
UBC11YOR339C CAF120P53836 1060 aa5.75□□□□□ -1.49
UBC11YOR339C YPL113CQ02961 396 aa5.75□□□□□ -1.49
UBC11YOR339C ARG7Q04728 441 aa5.75□□□□□ -1.49
UBC11YOR339C JIP5Q06214 492 aaPredicted RBP5.75□□□□□ -1.49
UBC11YOR339C HDA3Q06623 655 aa5.75□□□□□ -1.49
UBC11YOR339C NOB1Q08444 459 aaKnown RBP5.75□□□□□ -1.49
UBC11YOR339C VPS68Q12016 184 aa5.75□□□□□ -1.49
UBC11YOR339C NOT5Q12514 560 aaPredicted RBP5.75□□□□□ -1.49
UBC11YOR339C INH1P01097 85 aa5.74□□□□□ -1.49
UBC11YOR339C HEM2P05373 342 aa5.74□□□□□ -1.49
UBC11YOR339C CDC21P06785 304 aa5.74□□□□□ -1.49
UBC11YOR339C SWI5P08153 709 aa5.74□□□□□ -1.49
UBC11YOR339C FUM1P08417 488 aaKnown RBP5.74□□□□□ -1.49
UBC11YOR339C POL30P15873 258 aaKnown RBP5.74□□□□□ -1.49
UBC11YOR339C SEC15P22224 910 aa5.74□□□□□ -1.49
UBC11YOR339C VPS34P22543 875 aa5.74□□□□□ -1.49
UBC11YOR339C SNT1P25357 1226 aa5.74□□□□□ -1.49
UBC11YOR339C ATP11P32453 318 aa5.74□□□□□ -1.49
UBC11YOR339C MRE11P32829 692 aa5.74□□□□□ -1.49
UBC11YOR339C SRX1P36077 127 aa5.74□□□□□ -1.49
UBC11YOR339C RRP3P38712 501 aaKnown RBP5.74□□□□□ -1.49
UBC11YOR339C HSE1P38753 452 aa5.74□□□□□ -1.49
UBC11YOR339C YHR045WP38775 560 aa5.74□□□□□ -1.49
UBC11YOR339C PFS1P38872 237 aa5.74□□□□□ -1.49
UBC11YOR339C SHU2P38957 223 aa5.74□□□□□ -1.49
UBC11YOR339C CCT6P39079 546 aa5.74□□□□□ -1.49
UBC11YOR339C YEL073CP39974 107 aa5.74□□□□□ -1.49
UBC11YOR339C MEP1P40260 492 aa5.74□□□□□ -1.49
UBC11YOR339C YRB1P41920 201 aaKnown RBP5.74□□□□□ -1.49
UBC11YOR339C UBP6P43593 499 aaKnown RBP5.74□□□□□ -1.49
UBC11YOR339C MNN10P50108 393 aaKnown RBP5.74□□□□□ -1.49
UBC11YOR339C MRM2P53123 320 aa5.74□□□□□ -1.49
UBC11YOR339C HST3P53687 447 aa5.74□□□□□ -1.49
UBC11YOR339C IBD2P53892 351 aa5.74□□□□□ -1.49
UBC11YOR339C LSM3P57743 89 aaKnown RBP5.74□□□□□ -1.49
UBC11YOR339C RIF2Q06208 395 aa5.74□□□□□ -1.49
UBC11YOR339C VAM6Q07468 1049 aa5.74□□□□□ -1.49
UBC11YOR339C PST1Q12355 444 aa5.74□□□□□ -1.49
UBC11YOR339C YPT6Q99260 215 aa5.74□□□□□ -1.49
UBC11YOR339C STT4P37297 1900 aa5.74□□□□□ -1.49
UBC11YOR339C NMT1P14743 455 aa5.73□□□□□ -1.49
UBC11YOR339C GUK1P15454 187 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C YSR3P23501 404 aa5.73□□□□□ -1.49
UBC11YOR339C NPP1P25353 742 aa5.73□□□□□ -1.49
UBC11YOR339C YPT52P36018 234 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C RPF2P36160 344 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C RIM11P38615 370 aa5.73□□□□□ -1.49
UBC11YOR339C PRE3P38624 215 aa5.73□□□□□ -1.49
UBC11YOR339C UTP9P38882 575 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C PCF11P39081 626 aaPredicted RBP5.73□□□□□ -1.49
UBC11YOR339C DHH1P39517 506 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C NPT1P39683 429 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C STB2P46679 850 aa5.73□□□□□ -1.49
UBC11YOR339C BIR1P47134 954 aa5.73□□□□□ -1.49
UBC11YOR339C RNR4P49723 345 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C EFM5P53200 248 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C ZRG17P53735 605 aa5.73□□□□□ -1.49
UBC11YOR339C SUB1P54000 292 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C AAT1Q01802 451 aa5.73□□□□□ -1.49
UBC11YOR339C ECM9Q02202 377 aa5.73□□□□□ -1.49
UBC11YOR339C ELP4Q02884 456 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C YML119WQ03208 357 aa5.73□□□□□ -1.49
UBC11YOR339C GAS3Q03655 524 aa5.73□□□□□ -1.49
UBC11YOR339C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
UBC11YOR339C TFB4Q12004 338 aa5.73□□□□□ -1.49
UBC11YOR339C RIB2Q12362 591 aaKnown RBP5.73□□□□□ -1.49
UBC11YOR339C MET8P15807 274 aa5.72□□□□□ -1.49
UBC11YOR339C NIP1P32497 812 aaKnown RBP5.72□□□□□ -1.49
UBC11YOR339C SPR1P32603 445 aa5.72□□□□□ -1.49
UBC11YOR339C SDH3P33421 198 aa5.72□□□□□ -1.49
UBC11YOR339C CTP1P38152 299 aa5.72□□□□□ -1.49
UBC11YOR339C HEK2P38199 381 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
UBC11YOR339C ERP5P38819 212 aa5.72□□□□□ -1.49
UBC11YOR339C BZZ1P38822 633 aa5.72□□□□□ -1.49
UBC11YOR339C GIM4P40005 111 aaKnown RBP5.72□□□□□ -1.49
UBC11YOR339C PFA3P42836 336 aa5.72□□□□□ -1.49
UBC11YOR339C TY4A-JP47023 414 aa5.72□□□□□ -1.49
UBC11YOR339C YJR154WP47181 346 aa5.72□□□□□ -1.49
UBC11YOR339C SHY1P53266 389 aa5.72□□□□□ -1.49
UBC11YOR339C SLM2P53955 656 aa5.72□□□□□ -1.49
UBC11YOR339C VPS16Q03308 798 aa5.72□□□□□ -1.49
UBC11YOR339C GRS2Q06817 618 aa5.72□□□□□ -1.49
UBC11YOR339C PLB3Q08108 686 aa5.72□□□□□ -1.49
UBC11YOR339C RTT10Q08924 1013 aa5.72□□□□□ -1.49
UBC11YOR339C COX3P00420 269 aa5.71□□□□□ -1.5
UBC11YOR339C SPT3P06844 337 aa5.71□□□□□ -1.5
UBC11YOR339C PRP4P20053 465 aaKnown RBP5.71□□□□□ -1.5
UBC11YOR339C YCK2P23292 546 aaKnown RBP5.71□□□□□ -1.5
UBC11YOR339C YKL100CP34248 587 aa5.71□□□□□ -1.5
UBC11YOR339C DEF1P35732 738 aaKnown RBP5.71□□□□□ -1.5
UBC11YOR339C SOL2P37262 315 aa5.71□□□□□ -1.5
UBC11YOR339C UBA4P38820 440 aa5.71□□□□□ -1.5
UBC11YOR339C SPF1P39986 1215 aaKnown RBP5.71□□□□□ -1.5
UBC11YOR339C EMP65P40085 556 aa5.71□□□□□ -1.5
UBC11YOR339C YIL108WP40483 696 aaKnown RBP5.71□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms