RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C MND1P53102 219 aa4.83□□□□□ -1.64
CCS1YMR038C DRN1P53255 507 aaKnown RBP4.83□□□□□ -1.64
CCS1YMR038C YGR151CP53287 111 aa4.83□□□□□ -1.64
CCS1YMR038C PPN1Q04119 674 aa4.83□□□□□ -1.64
CCS1YMR038C SPG3Q04398 127 aaPredicted RBP4.83□□□□□ -1.64
CCS1YMR038C TAF3Q12297 353 aa4.83□□□□□ -1.64
CCS1YMR038C CSF1Q12150 2958 aa4.82□□□□□ -1.64
CCS1YMR038C GPA1P08539 472 aa4.82□□□□□ -1.64
CCS1YMR038C TUP1P16649 713 aa4.82□□□□□ -1.64
CCS1YMR038C ARF2P19146 181 aaKnown RBP4.82□□□□□ -1.64
CCS1YMR038C PLC1P32383 869 aa4.82□□□□□ -1.64
CCS1YMR038C CSG2P35206 410 aa4.82□□□□□ -1.64
CCS1YMR038C RPC25P35718 212 aa4.82□□□□□ -1.64
CCS1YMR038C YKT6P36015 200 aaKnown RBP4.82□□□□□ -1.64
CCS1YMR038C ECM13P38195 257 aa4.82□□□□□ -1.64
CCS1YMR038C WSC4P38739 605 aa4.82□□□□□ -1.64
CCS1YMR038C PTI1P39927 425 aaPredicted RBP4.82□□□□□ -1.64
CCS1YMR038C YER130CP39959 443 aa4.82□□□□□ -1.64
CCS1YMR038C YEL075CP39972 122 aa4.82□□□□□ -1.64
CCS1YMR038C ARG2P40360 574 aa4.82□□□□□ -1.64
CCS1YMR038C ASG1P40467 964 aa4.82□□□□□ -1.64
CCS1YMR038C PRM2P40534 656 aa4.82□□□□□ -1.64
CCS1YMR038C FET5P43561 622 aa4.82□□□□□ -1.64
CCS1YMR038C AIP1P46680 615 aaKnown RBP4.82□□□□□ -1.64
CCS1YMR038C TRM112P53738 135 aaPredicted RBP4.82□□□□□ -1.64
CCS1YMR038C AQR1P53943 586 aa4.82□□□□□ -1.64
CCS1YMR038C NGL1Q08213 363 aaKnown RBP4.82□□□□□ -1.64
CCS1YMR038C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.82□□□□□ -1.64not detected
CCS1YMR038C RPL1AP0CX43 217 aaKnown RBP4.81□□□□□ -1.64
CCS1YMR038C RPL1BP0CX44 217 aaKnown RBP4.81□□□□□ -1.64
CCS1YMR038C PTP1P25044 335 aa4.81□□□□□ -1.64
CCS1YMR038C HEM12P32347 362 aaPredicted RBP4.81□□□□□ -1.64
CCS1YMR038C MRPL40P36534 297 aa4.81□□□□□ -1.64
CCS1YMR038C CTM1P38818 585 aa4.81□□□□□ -1.64
CCS1YMR038C YJL206CP39529 758 aa4.81□□□□□ -1.64
CCS1YMR038C QRI1P43123 477 aaKnown RBP4.81□□□□□ -1.64
CCS1YMR038C YPT11P48559 417 aa4.81□□□□□ -1.64
CCS1YMR038C NRM1P53718 249 aa4.81□□□□□ -1.64
CCS1YMR038C ARO80Q04052 950 aa4.81□□□□□ -1.64
CCS1YMR038C RTN1Q04947 295 aaKnown RBP4.81□□□□□ -1.64
CCS1YMR038C YLR297WQ05899 129 aa4.81□□□□□ -1.64
CCS1YMR038C ECM38Q05902 660 aaPredicted RBP4.81□□□□□ -1.64
CCS1YMR038C BNA5Q05979 453 aa4.81□□□□□ -1.64
CCS1YMR038C YSH1Q06224 779 aaPredicted RBP4.81□□□□□ -1.64
CCS1YMR038C CSR1Q06705 408 aaKnown RBP4.81□□□□□ -1.64
CCS1YMR038C YDL086WQ07505 273 aa4.81□□□□□ -1.64
CCS1YMR038C IZH3Q07959 543 aa4.81□□□□□ -1.64
CCS1YMR038C DIS3Q08162 1001 aaKnown RBP4.81□□□□□ -1.64
CCS1YMR038C YAP7Q08182 245 aa4.81□□□□□ -1.64
CCS1YMR038C NDD1Q08887 554 aa4.81□□□□□ -1.64
CCS1YMR038C HFA1P32874 2273 aa4.8□□□□□ -1.64
CCS1YMR038C ADE3P07245 946 aaKnown RBP4.8□□□□□ -1.64
CCS1YMR038C SPT15P13393 240 aaKnown RBP4.8□□□□□ -1.64
CCS1YMR038C DGR2P32330 852 aa4.8□□□□□ -1.64
CCS1YMR038C GLG1P36143 616 aa4.8□□□□□ -1.64
CCS1YMR038C MUM2P38236 366 aa4.8□□□□□ -1.64
CCS1YMR038C YHR033WP38690 423 aa4.8□□□□□ -1.64
CCS1YMR038C PFS1P38872 237 aa4.8□□□□□ -1.64
CCS1YMR038C IRC5P43610 853 aa4.8□□□□□ -1.64
CCS1YMR038C AIM23P47015 356 aa4.8□□□□□ -1.64
CCS1YMR038C COS5P47187 383 aa4.8□□□□□ -1.64
CCS1YMR038C SPC105P53148 917 aa4.8□□□□□ -1.64
CCS1YMR038C EBS1Q03466 884 aaKnown RBP4.8□□□□□ -1.64
CCS1YMR038C COG4Q06096 861 aa4.8□□□□□ -1.64
CCS1YMR038C SIL1Q08199 421 aa4.8□□□□□ -1.64
CCS1YMR038C EMP46Q12396 444 aa4.8□□□□□ -1.64
CCS1YMR038C ARP7Q12406 477 aa4.8□□□□□ -1.64
CCS1YMR038C YIL046W-AQ3E7Z4 54 aa4.8□□□□□ -1.64
CCS1YMR038C DDP1Q99321 188 aaKnown RBP4.8□□□□□ -1.64
CCS1YMR038C JIP3O13555 125 aa4.79□□□□□ -1.64
CCS1YMR038C PAB1P04147 577 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64 RIP-Chip
CCS1YMR038C RPL22AP05749 121 aaKnown RBP4.79□□□□□ -1.64
CCS1YMR038C PCT1P13259 424 aa4.79□□□□□ -1.64
CCS1YMR038C SEC63P14906 663 aa4.79□□□□□ -1.64
CCS1YMR038C GYP6P32806 458 aa4.79□□□□□ -1.64
CCS1YMR038C YMC2P38087 329 aa4.79□□□□□ -1.64
CCS1YMR038C URA8P38627 578 aaPredicted RBP4.79□□□□□ -1.64
CCS1YMR038C BDH2P39713 417 aa4.79□□□□□ -1.64
CCS1YMR038C TMN3P40071 706 aa4.79□□□□□ -1.64
CCS1YMR038C BST1P43571 1029 aa4.79□□□□□ -1.64
CCS1YMR038C STU2P46675 888 aa4.79□□□□□ -1.64
CCS1YMR038C YJR079WP47126 109 aa4.79□□□□□ -1.64
CCS1YMR038C YDL183CP48569 320 aa4.79□□□□□ -1.64
CCS1YMR038C VPS73P53142 486 aaKnown RBP4.79□□□□□ -1.64
CCS1YMR038C COP1P53622 1201 aaKnown RBP4.79□□□□□ -1.64
CCS1YMR038C SNF12P53628 566 aa4.79□□□□□ -1.64
CCS1YMR038C FDC1Q03034 503 aa4.79□□□□□ -1.64
CCS1YMR038C HLR1Q04429 423 aa4.79□□□□□ -1.64
CCS1YMR038C TAF9Q05027 157 aa4.79□□□□□ -1.64
CCS1YMR038C CLP1Q08685 445 aaPredicted RBP4.79□□□□□ -1.64
CCS1YMR038C YOR389WQ08912 624 aa4.79□□□□□ -1.64
CCS1YMR038C YPL278CQ08990 100 aa4.79□□□□□ -1.64
CCS1YMR038C GAL4P04386 881 aa4.78□□□□□ -1.64
CCS1YMR038C CDC37P06101 506 aaKnown RBP4.78□□□□□ -1.64
CCS1YMR038C ABF1P14164 731 aa4.78□□□□□ -1.64
CCS1YMR038C NTH1P32356 751 aa4.78□□□□□ -1.64
CCS1YMR038C PXA2P34230 853 aa4.78□□□□□ -1.64
CCS1YMR038C TDP1P38319 544 aa4.78□□□□□ -1.64
CCS1YMR038C SRP68P38687 599 aaKnown RBP4.78□□□□□ -1.64
CCS1YMR038C RRP3P38712 501 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms