RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C RPB2P08518 1224 aaKnown RBP4.29□□□□□ -1.72
SDS3YIL084C MCM10P32354 571 aa4.29□□□□□ -1.72
SDS3YIL084C MRP20P32387 263 aa4.29□□□□□ -1.72
SDS3YIL084C UTR4P32626 227 aa4.29□□□□□ -1.72
SDS3YIL084C NTR2P36118 322 aaPredicted RBP4.29□□□□□ -1.72
SDS3YIL084C ARN1P38731 627 aa4.29□□□□□ -1.72
SDS3YIL084C SEC31P38968 1273 aaKnown RBP4.29□□□□□ -1.72
SDS3YIL084C TIF4631P39935 952 aaKnown RBP4.29□□□□□ -1.72
SDS3YIL084C BNA3P47039 444 aaKnown RBP4.29□□□□□ -1.72
SDS3YIL084C SLD5Q03406 294 aa4.29□□□□□ -1.72
SDS3YIL084C DAP1Q12091 152 aa4.29□□□□□ -1.72
SDS3YIL084C YLR049CQ12110 428 aa4.29□□□□□ -1.72
SDS3YIL084C NKP1Q12493 238 aa4.29□□□□□ -1.72
SDS3YIL084C YOL087CQ99247 1116 aa4.29□□□□□ -1.72
SDS3YIL084C YMR085WP0CF18 432 aa4.28□□□□□ -1.72
SDS3YIL084C SAM1P10659 382 aaKnown RBP4.28□□□□□ -1.72
SDS3YIL084C SRP54P20424 541 aaKnown RBP4.28□□□□□ -1.72
SDS3YIL084C PRE8P23639 250 aa4.28□□□□□ -1.72
SDS3YIL084C SHP1P34223 423 aa4.28□□□□□ -1.72
SDS3YIL084C ADE17P38009 592 aaKnown RBP4.28□□□□□ -1.72
SDS3YIL084C KTR3P38130 404 aaPredicted RBP4.28□□□□□ -1.72
SDS3YIL084C PSD1P39006 500 aa4.28□□□□□ -1.72
SDS3YIL084C YJR061WP40355 935 aa4.28□□□□□ -1.72
SDS3YIL084C YJL107CP42947 387 aa4.28□□□□□ -1.72
SDS3YIL084C SGM1P47166 707 aa4.28□□□□□ -1.72
SDS3YIL084C MEP3P53390 489 aa4.28□□□□□ -1.72
SDS3YIL084C BSC5P53755 489 aa4.28□□□□□ -1.72
SDS3YIL084C MUB1Q03162 620 aa4.28□□□□□ -1.72
SDS3YIL084C PDR8Q06149 701 aa4.28□□□□□ -1.72
SDS3YIL084C PSK2Q08217 1101 aa4.28□□□□□ -1.72
SDS3YIL084C CRC1Q12289 327 aa4.28□□□□□ -1.72
SDS3YIL084C SKM1Q12469 655 aa4.28□□□□□ -1.72
SDS3YIL084C YOR019WQ99248 730 aa4.28□□□□□ -1.72
SDS3YIL084C YBR085C-AO43137 85 aa4.27□□□□□ -1.73
SDS3YIL084C YAP1P19880 650 aaKnown RBP4.27□□□□□ -1.73
SDS3YIL084C YCR006CP25350 157 aa4.27□□□□□ -1.73
SDS3YIL084C YUR1P26725 428 aa4.27□□□□□ -1.73
SDS3YIL084C POT1P27796 417 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
SDS3YIL084C CHS3P29465 1165 aa4.27□□□□□ -1.73
SDS3YIL084C UBP13P38187 747 aa4.27□□□□□ -1.73
SDS3YIL084C TPA1P40032 644 aaKnown RBP4.27□□□□□ -1.73
SDS3YIL084C CDC1P40986 491 aa4.27□□□□□ -1.73
SDS3YIL084C IME4P41833 600 aa4.27□□□□□ -1.73
SDS3YIL084C SWP82P43554 623 aa4.27□□□□□ -1.73
SDS3YIL084C GLO1P50107 326 aa4.27□□□□□ -1.73
SDS3YIL084C COP1P53622 1201 aaKnown RBP4.27□□□□□ -1.73
SDS3YIL084C RSM28Q03430 361 aa4.27□□□□□ -1.73
SDS3YIL084C CSI1Q04368 295 aa4.27□□□□□ -1.73
SDS3YIL084C YDL121CQ07541 149 aa4.27□□□□□ -1.73
SDS3YIL084C YDL144CQ07589 356 aa4.27□□□□□ -1.73
SDS3YIL084C MCH4Q08268 501 aa4.27□□□□□ -1.73
SDS3YIL084C RPP0P05317 312 aaKnown RBP4.26□□□□□ -1.73
SDS3YIL084C SAM2P19358 384 aaKnown RBP4.26□□□□□ -1.73
SDS3YIL084C GFD2P25370 566 aaKnown RBP4.26□□□□□ -1.73
SDS3YIL084C ALY1P36117 915 aa4.26□□□□□ -1.73
SDS3YIL084C TOM71P38825 639 aaKnown RBP4.26□□□□□ -1.73
SDS3YIL084C ECM10P39987 644 aa4.26□□□□□ -1.73
SDS3YIL084C SLZ1P40167 298 aa4.26□□□□□ -1.73
SDS3YIL084C YIL024CP40543 189 aa4.26□□□□□ -1.73
SDS3YIL084C CFD1P40558 293 aa4.26□□□□□ -1.73
SDS3YIL084C ARC1P46672 376 aaKnown RBP4.26□□□□□ -1.73
SDS3YIL084C UBP8P50102 471 aa4.26□□□□□ -1.73
SDS3YIL084C IST1P53843 298 aaPredicted RBP4.26□□□□□ -1.73
SDS3YIL084C STP1Q00947 519 aa4.26□□□□□ -1.73
SDS3YIL084C VTC3Q02725 835 aa4.26□□□□□ -1.73
SDS3YIL084C PFA4Q12006 378 aa4.26□□□□□ -1.73
SDS3YIL084C RTP1Q12751 981 aa4.26□□□□□ -1.73
SDS3YIL084C ACC1Q00955 2233 aaKnown RBP4.26□□□□□ -1.73
SDS3YIL084C FKS1P38631 1876 aaKnown RBP4.26□□□□□ -1.73
SDS3YIL084C HXK2P04807 486 aaKnown RBP4.25□□□□□ -1.73
SDS3YIL084C CDC24P11433 854 aaPredicted RBP4.25□□□□□ -1.73
SDS3YIL084C POX1P13711 748 aa4.25□□□□□ -1.73
SDS3YIL084C DPH1P40487 425 aaKnown RBP4.25□□□□□ -1.73
SDS3YIL084C CTK2P46962 323 aa4.25□□□□□ -1.73
SDS3YIL084C AAD10P47182 288 aa4.25□□□□□ -1.73
SDS3YIL084C CCH1P50077 2039 aa4.25□□□□□ -1.73
SDS3YIL084C YNL144CP53907 740 aa4.25□□□□□ -1.73
SDS3YIL084C EMI2Q04409 500 aaKnown RBP4.25□□□□□ -1.73
SDS3YIL084C YLR455WQ06188 304 aa4.25□□□□□ -1.73
SDS3YIL084C SKG3Q06315 1026 aa4.25□□□□□ -1.73
SDS3YIL084C RRI1Q12468 440 aa4.25□□□□□ -1.73
SDS3YIL084C SEN1Q00416 2231 aaKnown RBP4.24□□□□□ -1.73
SDS3YIL084C PET111P08468 800 aa4.24□□□□□ -1.73
SDS3YIL084C CNA1P23287 553 aa4.24□□□□□ -1.73
SDS3YIL084C FMP10P40098 244 aa4.24□□□□□ -1.73
SDS3YIL084C TMA108P40462 946 aa4.24□□□□□ -1.73
SDS3YIL084C MNT3P40549 630 aa4.24□□□□□ -1.73
SDS3YIL084C SVL3Q03088 825 aaKnown RBP4.24□□□□□ -1.73
SDS3YIL084C PFA5Q03289 374 aa4.24□□□□□ -1.73
SDS3YIL084C SWF1Q04629 336 aa4.24□□□□□ -1.73
SDS3YIL084C PIG1Q06216 648 aa4.24□□□□□ -1.73
SDS3YIL084C GPN2Q08726 347 aaPredicted RBP4.24□□□□□ -1.73
SDS3YIL084C YOR111WQ99210 232 aa4.24□□□□□ -1.73
SDS3YIL084C GPA1P08539 472 aa4.23□□□□□ -1.73
SDS3YIL084C CUP1-1P0CX80 61 aa4.23□□□□□ -1.73
SDS3YIL084C CUP1-2P0CX81 61 aa4.23□□□□□ -1.73
SDS3YIL084C MAS2P11914 482 aa4.23□□□□□ -1.73
SDS3YIL084C RAP1P11938 827 aa4.23□□□□□ -1.73
SDS3YIL084C SCO2P38072 301 aa4.23□□□□□ -1.73
SDS3YIL084C YEL068CP39977 110 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms